RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
SF3B1-206ENST00000462613 IQGAP2Q13576 1575 aa10.48□□□□□ -0.73
SF3B1-206ENST00000462613 RIMBP3CA6NJZ7 1639 aa10.46□□□□□ -0.74
SF3B1-206ENST00000462613 RIMBP3BA6NNM3 1639 aa10.46□□□□□ -0.74
SF3B1-206ENST00000462613 SHROOM2Q13796 1616 aa10.46□□□□□ -0.74
SF3B1-206ENST00000462613 RIMBP3Q9UFD9 1639 aa10.46□□□□□ -0.74
SF3B1-206ENST00000462613 ARHGEF11O15085 1522 aa10.45□□□□□ -0.74
SF3B1-206ENST00000462613 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
SF3B1-206ENST00000462613 JPH4Q96JJ6 628 aa10.42□□□□□ -0.74
SF3B1-206ENST00000462613 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
SF3B1-206ENST00000462613 UBTFP17480 764 aaKnown RBP10.4□□□□□ -0.74
SF3B1-206ENST00000462613 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.75
SF3B1-206ENST00000462613 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
SF3B1-206ENST00000462613 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
SF3B1-206ENST00000462613 KIAA0556O60303 1618 aa10.35□□□□□ -0.75
SF3B1-206ENST00000462613 ARAP1Q96P48 1450 aa10.35□□□□□ -0.75
SF3B1-206ENST00000462613 ERCC6L2Q5T890 1561 aa10.35□□□□□ -0.75
SF3B1-206ENST00000462613 CYB5RLQ6IPT4 315 aa10.33□□□□□ -0.76
SF3B1-206ENST00000462613 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
SF3B1-206ENST00000462613 SAMD9Q5K651 1589 aa10.31□□□□□ -0.76
SF3B1-206ENST00000462613 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
SF3B1-206ENST00000462613 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
SF3B1-206ENST00000462613 RANGAP1P46060 587 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-206ENST00000462613 PTPRGP23470 1445 aa10.3□□□□□ -0.76
SF3B1-206ENST00000462613 TTBK1Q5TCY1 1321 aaPredicted RBP10.29□□□□□ -0.76
SF3B1-206ENST00000462613 NPM1P06748 294 aaKnown RBP eCLIP10.27□□□□□ -0.77
SF3B1-206ENST00000462613 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
SF3B1-206ENST00000462613 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
SF3B1-206ENST00000462613 ADCY10Q96PN6 1610 aa10.23□□□□□ -0.77
SF3B1-206ENST00000462613 CLIP1P30622 1438 aa10.23□□□□□ -0.77
SF3B1-206ENST00000462613 FMN1Q68DA7 1419 aa10.23□□□□□ -0.77
SF3B1-206ENST00000462613 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
SF3B1-206ENST00000462613 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
SF3B1-206ENST00000462613 FHOD3Q2V2M9 1422 aa10.22□□□□□ -0.77
SF3B1-206ENST00000462613 UHRF1BP1LA0JNW5 1464 aa10.22□□□□□ -0.77
SF3B1-206ENST00000462613 ARHGAP35Q9NRY4 1499 aa10.21□□□□□ -0.78
SF3B1-206ENST00000462613 ABCA8O94911 1581 aa10.2□□□□□ -0.78
SF3B1-206ENST00000462613 PLB1Q6P1J6 1458 aa10.19□□□□□ -0.78
SF3B1-206ENST00000462613 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
SF3B1-206ENST00000462613 LOC105371045A0A1W2PR82 267 aa10.19□□□□□ -0.78
SF3B1-206ENST00000462613 ZCCHC11Q5TAX3 1644 aaKnown RBP10.18□□□□□ -0.78
SF3B1-206ENST00000462613 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
SF3B1-206ENST00000462613 MAPKBP1O60336 1514 aa10.17□□□□□ -0.78
SF3B1-206ENST00000462613 KDM5BQ9UGL1 1544 aa10.16□□□□□ -0.78
SF3B1-206ENST00000462613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-206ENST00000462613 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
SF3B1-206ENST00000462613 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-206ENST00000462613 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
SF3B1-206ENST00000462613 KIF13AQ9H1H9 1805 aa10.13□□□□□ -0.79
SF3B1-206ENST00000462613 PCF11O94913 1555 aaKnown RBP10.13□□□□□ -0.79
SF3B1-206ENST00000462613 FYCO1Q9BQS8 1478 aa10.12□□□□□ -0.79
SF3B1-206ENST00000462613 NUP153P49790 1475 aaKnown RBP10.11□□□□□ -0.79
SF3B1-206ENST00000462613 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
SF3B1-206ENST00000462613 ASXL2Q76L83 1435 aa10.11□□□□□ -0.79
SF3B1-206ENST00000462613 CASKIN1Q8WXD9 1431 aa10.11□□□□□ -0.79
SF3B1-206ENST00000462613 CDK11AQ9UQ88 783 aaPredicted RBP10.11□□□□□ -0.79
SF3B1-206ENST00000462613 ATP10BO94823 1461 aa10.1□□□□□ -0.79
SF3B1-206ENST00000462613 WDR7Q9Y4E6 1490 aa10.1□□□□□ -0.79
SF3B1-206ENST00000462613 EPRSP07814 1512 aaKnown RBP10.09□□□□□ -0.79
SF3B1-206ENST00000462613 TSPOAP1O95153 1857 aa10.09□□□□□ -0.79
SF3B1-206ENST00000462613 ARID3CA6NKF2 412 aa10.09□□□□□ -0.79
SF3B1-206ENST00000462613 LRRIQ1Q96JM4 1722 aa10.09□□□□□ -0.79
SF3B1-206ENST00000462613 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
SF3B1-206ENST00000462613 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
SF3B1-206ENST00000462613 ABCC10Q5T3U5 1492 aa10.08□□□□□ -0.8
SF3B1-206ENST00000462613 VPS8Q8N3P4 1428 aa10.07□□□□□ -0.8
SF3B1-206ENST00000462613 CFAP43Q8NDM7 1665 aa10.07□□□□□ -0.8
SF3B1-206ENST00000462613 APLP2Q06481 763 aa10.07□□□□□ -0.8
SF3B1-206ENST00000462613 CDK13Q14004 1512 aaKnown RBP10.07□□□□□ -0.8
SF3B1-206ENST00000462613 FAM69CQ0P6D2 419 aa10.06□□□□□ -0.8
SF3B1-206ENST00000462613 GLI2P10070 1586 aa10.05□□□□□ -0.8
SF3B1-206ENST00000462613 KIF14Q15058 1648 aa10.05□□□□□ -0.8
SF3B1-206ENST00000462613 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
SF3B1-206ENST00000462613 MAP3K4Q9Y6R4 1608 aa10.04□□□□□ -0.8
SF3B1-206ENST00000462613 ABCA9Q8IUA7 1624 aa10.03□□□□□ -0.8
SF3B1-206ENST00000462613 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.8
SF3B1-206ENST00000462613 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
SF3B1-206ENST00000462613 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-206ENST00000462613 TIAM1Q13009 1591 aa10.01□□□□□ -0.81
SF3B1-206ENST00000462613 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
SF3B1-206ENST00000462613 EHBP1L1Q8N3D4 1523 aa10□□□□□ -0.81
SF3B1-206ENST00000462613 CFAP74Q9C0B2 1584 aa10□□□□□ -0.81
SF3B1-206ENST00000462613 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
SF3B1-206ENST00000462613 MAP3K1Q13233 1512 aa9.99□□□□□ -0.81
SF3B1-206ENST00000462613 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
SF3B1-206ENST00000462613 ITSN2Q9NZM3 1697 aa9.98□□□□□ -0.81
SF3B1-206ENST00000462613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
SF3B1-206ENST00000462613 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
SF3B1-206ENST00000462613 PPRC1Q5VV67 1664 aaKnown RBP9.96□□□□□ -0.81
SF3B1-206ENST00000462613 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.82
SF3B1-206ENST00000462613 CDC42BPAQ5VT25 1732 aa9.96□□□□□ -0.82
SF3B1-206ENST00000462613 KDM6BO15054 1643 aa9.95□□□□□ -0.82
SF3B1-206ENST00000462613 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
SF3B1-206ENST00000462613 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
SF3B1-206ENST00000462613 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
SF3B1-206ENST00000462613 ARAP3Q8WWN8 1544 aa9.93□□□□□ -0.82
SF3B1-206ENST00000462613 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
SF3B1-206ENST00000462613 PHLDB1Q86UU1 1377 aa9.93□□□□□ -0.82
SF3B1-206ENST00000462613 NEO1Q92859 1461 aa9.92□□□□□ -0.82
SF3B1-206ENST00000462613 CCNB3Q8WWL7 1395 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms