RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
DDX39B-215ENST00000462256 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
DDX39B-215ENST00000462256 GOLGA3Q08378 1498 aa13.89□□□□□ -0.19
DDX39B-215ENST00000462256 CUX1P39880 1505 aa13.88□□□□□ -0.19
DDX39B-215ENST00000462256 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
DDX39B-215ENST00000462256 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
DDX39B-215ENST00000462256 CLIP1P30622 1438 aa13.85□□□□□ -0.19
DDX39B-215ENST00000462256 PRG4Q92954 1404 aaPredicted RBP13.83□□□□□ -0.19
DDX39B-215ENST00000462256 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
DDX39B-215ENST00000462256 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
DDX39B-215ENST00000462256 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
DDX39B-215ENST00000462256 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
DDX39B-215ENST00000462256 WDR62O43379 1518 aa13.81□□□□□ -0.2
DDX39B-215ENST00000462256 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
DDX39B-215ENST00000462256 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
DDX39B-215ENST00000462256 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-215ENST00000462256 TNIKQ9UKE5 1360 aa13.76□□□□□ -0.21
DDX39B-215ENST00000462256 TRIM52Q96A61 297 aa13.75□□□□□ -0.21
DDX39B-215ENST00000462256 BCANQ96GW7 911 aa13.75□□□□□ -0.21
DDX39B-215ENST00000462256 HRCP23327 699 aa13.74□□□□□ -0.21
DDX39B-215ENST00000462256 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
DDX39B-215ENST00000462256 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
DDX39B-215ENST00000462256 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
DDX39B-215ENST00000462256 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
DDX39B-215ENST00000462256 MYT1Q01538 1121 aa13.72□□□□□ -0.21
DDX39B-215ENST00000462256 MLECQ14165 292 aa13.72□□□□□ -0.21
DDX39B-215ENST00000462256 RUSC2Q8N2Y8 1516 aa13.71□□□□□ -0.22
DDX39B-215ENST00000462256 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
DDX39B-215ENST00000462256 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
DDX39B-215ENST00000462256 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
DDX39B-215ENST00000462256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.229e-16■■□□□ 11.4
DDX39B-215ENST00000462256 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
DDX39B-215ENST00000462256 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
DDX39B-215ENST00000462256 CCNB3Q8WWL7 1395 aa13.64□□□□□ -0.23
DDX39B-215ENST00000462256 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
DDX39B-215ENST00000462256 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
DDX39B-215ENST00000462256 ERICH3Q5RHP9 1530 aa13.63□□□□□ -0.23
DDX39B-215ENST00000462256 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
DDX39B-215ENST00000462256 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
DDX39B-215ENST00000462256 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
DDX39B-215ENST00000462256 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
DDX39B-215ENST00000462256 UACAQ9BZF9 1416 aa13.54□□□□□ -0.24
DDX39B-215ENST00000462256 GGT6Q6P531 493 aa13.54□□□□□ -0.24
DDX39B-215ENST00000462256 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.24
DDX39B-215ENST00000462256 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
DDX39B-215ENST00000462256 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
DDX39B-215ENST00000462256 PPP1R15AO75807 674 aaPredicted RBP13.46□□□□□ -0.25
DDX39B-215ENST00000462256 IQGAP2Q13576 1575 aa13.46□□□□□ -0.25
DDX39B-215ENST00000462256 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
DDX39B-215ENST00000462256 HNRNPMP52272 730 aaKnown RBP eCLIP13.46□□□□□ -0.26
DDX39B-215ENST00000462256 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
DDX39B-215ENST00000462256 CCDC18Q5T9S5 1454 aa13.45□□□□□ -0.26
DDX39B-215ENST00000462256 CUL7Q14999 1698 aa13.45□□□□□ -0.26
DDX39B-215ENST00000462256 RSPH4AQ5TD94 716 aa13.44□□□□□ -0.26
DDX39B-215ENST00000462256 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-215ENST00000462256 NUP160Q12769 1436 aa13.43□□□□□ -0.26
DDX39B-215ENST00000462256 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
DDX39B-215ENST00000462256 KIF3BO15066 747 aa13.41□□□□□ -0.26
DDX39B-215ENST00000462256 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
DDX39B-215ENST00000462256 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
DDX39B-215ENST00000462256 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
DDX39B-215ENST00000462256 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
DDX39B-215ENST00000462256 PLB1Q6P1J6 1458 aa13.4□□□□□ -0.26
DDX39B-215ENST00000462256 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
DDX39B-215ENST00000462256 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
DDX39B-215ENST00000462256 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
DDX39B-215ENST00000462256 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
DDX39B-215ENST00000462256 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
DDX39B-215ENST00000462256 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
DDX39B-215ENST00000462256 KANK1Q14678 1352 aa13.38□□□□□ -0.27
DDX39B-215ENST00000462256 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-215ENST00000462256 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
DDX39B-215ENST00000462256 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
DDX39B-215ENST00000462256 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
DDX39B-215ENST00000462256 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-215ENST00000462256 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
DDX39B-215ENST00000462256 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
DDX39B-215ENST00000462256 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
DDX39B-215ENST00000462256 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
DDX39B-215ENST00000462256 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
DDX39B-215ENST00000462256 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
DDX39B-215ENST00000462256 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
DDX39B-215ENST00000462256 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
DDX39B-215ENST00000462256 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
DDX39B-215ENST00000462256 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.28
DDX39B-215ENST00000462256 CASKIN1Q8WXD9 1431 aa13.27□□□□□ -0.29
DDX39B-215ENST00000462256 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
DDX39B-215ENST00000462256 KIF21BO75037 1637 aa13.26□□□□□ -0.29
DDX39B-215ENST00000462256 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
DDX39B-215ENST00000462256 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
DDX39B-215ENST00000462256 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
DDX39B-215ENST00000462256 ARHGAP5Q13017 1502 aa13.25□□□□□ -0.29
DDX39B-215ENST00000462256 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
DDX39B-215ENST00000462256 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
DDX39B-215ENST00000462256 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
DDX39B-215ENST00000462256 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
DDX39B-215ENST00000462256 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
DDX39B-215ENST00000462256 CHD1O14646 1710 aa13.22□□□□□ -0.29
DDX39B-215ENST00000462256 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
DDX39B-215ENST00000462256 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms