RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 WIZO95785 1651 aa11.33□□□□□ -0.6
SMARCC1-204ENST00000462198 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
SMARCC1-204ENST00000462198 AQRO60306 1485 aaKnown RBP eCLIP11.27□□□□□ -0.68e-7■■■■□ 26.5
SMARCC1-204ENST00000462198 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
SMARCC1-204ENST00000462198 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
SMARCC1-204ENST00000462198 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-204ENST00000462198 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
SMARCC1-204ENST00000462198 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
SMARCC1-204ENST00000462198 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
SMARCC1-204ENST00000462198 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
SMARCC1-204ENST00000462198 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
SMARCC1-204ENST00000462198 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-204ENST00000462198 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
SMARCC1-204ENST00000462198 POLA2Q14181 598 aa11.11□□□□□ -0.63
SMARCC1-204ENST00000462198 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
SMARCC1-204ENST00000462198 DNMBPQ6XZF7 1577 aa11.1□□□□□ -0.63
SMARCC1-204ENST00000462198 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
SMARCC1-204ENST00000462198 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
SMARCC1-204ENST00000462198 SNAPC4Q5SXM2 1469 aa11.08□□□□□ -0.64
SMARCC1-204ENST00000462198 RAD54L2Q9Y4B4 1467 aa11.07□□□□□ -0.64
SMARCC1-204ENST00000462198 SOGA1O94964 1423 aa11.07□□□□□ -0.64
SMARCC1-204ENST00000462198 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-204ENST00000462198 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
SMARCC1-204ENST00000462198 CCDC88BA6NC98 1476 aa11.05□□□□□ -0.64
SMARCC1-204ENST00000462198 KIF13AQ9H1H9 1805 aa11.03□□□□□ -0.64
SMARCC1-204ENST00000462198 MAGI1Q96QZ7 1491 aaPredicted RBP11.02□□□□□ -0.65
SMARCC1-204ENST00000462198 SYNJ2O15056 1496 aa11□□□□□ -0.65
SMARCC1-204ENST00000462198 FAM69CQ0P6D2 419 aa11□□□□□ -0.65
SMARCC1-204ENST00000462198 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
SMARCC1-204ENST00000462198 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
SMARCC1-204ENST00000462198 ZBTB22O15209 634 aa10.97□□□□□ -0.65
SMARCC1-204ENST00000462198 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
SMARCC1-204ENST00000462198 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
SMARCC1-204ENST00000462198 HAX1O00165 279 aa10.95□□□□□ -0.66
SMARCC1-204ENST00000462198 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
SMARCC1-204ENST00000462198 FGD5Q6ZNL6 1462 aa10.92□□□□□ -0.66
SMARCC1-204ENST00000462198 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMARCC1-204ENST00000462198 FBXO41Q8TF61 875 aa10.91□□□□□ -0.66
SMARCC1-204ENST00000462198 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-204ENST00000462198 ABCC10Q5T3U5 1492 aa10.9□□□□□ -0.66
SMARCC1-204ENST00000462198 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.662e-8■■■■□ 21
SMARCC1-204ENST00000462198 KDM6BO15054 1643 aa10.89□□□□□ -0.67
SMARCC1-204ENST00000462198 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
SMARCC1-204ENST00000462198 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
SMARCC1-204ENST00000462198 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
SMARCC1-204ENST00000462198 TSPOAP1O95153 1857 aa10.86□□□□□ -0.67
SMARCC1-204ENST00000462198 HECW2Q9P2P5 1572 aa10.86□□□□□ -0.67
SMARCC1-204ENST00000462198 SLC24A1O60721 1099 aa10.84□□□□□ -0.67
SMARCC1-204ENST00000462198 GRIN2AQ12879 1464 aa10.83□□□□□ -0.68
SMARCC1-204ENST00000462198 ADGRL1O94910 1474 aa10.82□□□□□ -0.68
SMARCC1-204ENST00000462198 SHROOM2Q13796 1616 aa10.81□□□□□ -0.68
SMARCC1-204ENST00000462198 CUX1P39880 1505 aa10.81□□□□□ -0.68
SMARCC1-204ENST00000462198 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
SMARCC1-204ENST00000462198 NUP160Q12769 1436 aa10.81□□□□□ -0.68
SMARCC1-204ENST00000462198 DIP2BQ9P265 1576 aa10.81□□□□□ -0.68
SMARCC1-204ENST00000462198 PRG4Q92954 1404 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-204ENST00000462198 EVX2Q03828 476 aa10.79□□□□□ -0.68
SMARCC1-204ENST00000462198 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
SMARCC1-204ENST00000462198 LMTK3Q96Q04 1460 aa10.76□□□□□ -0.69
SMARCC1-204ENST00000462198 ABCA5Q8WWZ7 1642 aa10.76□□□□□ -0.69
SMARCC1-204ENST00000462198 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
SMARCC1-204ENST00000462198 SOCS7O14512 581 aa10.72□□□□□ -0.69
SMARCC1-204ENST00000462198 FHAD1B1AJZ9 1412 aa10.71□□□□□ -0.69
SMARCC1-204ENST00000462198 ADAMTS12P58397 1594 aa10.71□□□□□ -0.69
SMARCC1-204ENST00000462198 ADCY10Q96PN6 1610 aa10.71□□□□□ -0.69
SMARCC1-204ENST00000462198 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-204ENST00000462198 ILDR2Q71H61 639 aa10.7□□□□□ -0.7
SMARCC1-204ENST00000462198 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
SMARCC1-204ENST00000462198 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
SMARCC1-204ENST00000462198 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
SMARCC1-204ENST00000462198 COL17A1Q9UMD9 1497 aaPredicted RBP10.67□□□□□ -0.7
SMARCC1-204ENST00000462198 PPRC1Q5VV67 1664 aaKnown RBP10.64□□□□□ -0.71
SMARCC1-204ENST00000462198 WRNQ14191 1432 aaPredicted RBP eCLIP10.62□□□□□ -0.714e-9■■□□□ 14.1
SMARCC1-204ENST00000462198 DISP3Q9P2K9 1392 aa10.62□□□□□ -0.71
SMARCC1-204ENST00000462198 TTBK1Q5TCY1 1321 aaPredicted RBP10.61□□□□□ -0.71
SMARCC1-204ENST00000462198 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
SMARCC1-204ENST00000462198 LHX8Q68G74 356 aa10.6□□□□□ -0.71
SMARCC1-204ENST00000462198 GLI2P10070 1586 aa10.6□□□□□ -0.71
SMARCC1-204ENST00000462198 ERICH3Q5RHP9 1530 aa10.59□□□□□ -0.71
SMARCC1-204ENST00000462198 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
SMARCC1-204ENST00000462198 PLB1Q6P1J6 1458 aa10.58□□□□□ -0.72
SMARCC1-204ENST00000462198 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
SMARCC1-204ENST00000462198 PTPRGP23470 1445 aa10.58□□□□□ -0.72
SMARCC1-204ENST00000462198 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
SMARCC1-204ENST00000462198 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
SMARCC1-204ENST00000462198 TEX14Q8IWB6 1497 aa10.54□□□□□ -0.72
SMARCC1-204ENST00000462198 ABCC2Q92887 1545 aa10.53□□□□□ -0.72
SMARCC1-204ENST00000462198 GABBR2O75899 941 aa10.53□□□□□ -0.72
SMARCC1-204ENST00000462198 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
SMARCC1-204ENST00000462198 KIAA0586Q9BVV6 1533 aa10.52□□□□□ -0.73
SMARCC1-204ENST00000462198 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
SMARCC1-204ENST00000462198 SPDYE2BA6NHP3 402 aa10.51□□□□□ -0.73
SMARCC1-204ENST00000462198 SPDYE6P0CI01 402 aa10.51□□□□□ -0.73
SMARCC1-204ENST00000462198 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
SMARCC1-204ENST00000462198 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
SMARCC1-204ENST00000462198 CUL7Q14999 1698 aa10.5□□□□□ -0.73
SMARCC1-204ENST00000462198 TNIKQ9UKE5 1360 aa10.49□□□□□ -0.73
SMARCC1-204ENST00000462198 PTPRMP28827 1452 aa10.48□□□□□ -0.73
SMARCC1-204ENST00000462198 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
SMARCC1-204ENST00000462198 KIF21BO75037 1637 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms