RNA–Protein interactions for RNA: ENST00000462135.1

STX1A-206, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-206ENST00000462135 NUP160Q12769 1436 aa19.13■□□□□ 0.65
STX1A-206ENST00000462135 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
STX1A-206ENST00000462135 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
STX1A-206ENST00000462135 IQGAP2Q13576 1575 aa19.08■□□□□ 0.65
STX1A-206ENST00000462135 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
STX1A-206ENST00000462135 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
STX1A-206ENST00000462135 UGGT2Q9NYU1 1516 aa19.04■□□□□ 0.64
STX1A-206ENST00000462135 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
STX1A-206ENST00000462135 SAMD9Q5K651 1589 aa19.02■□□□□ 0.63
STX1A-206ENST00000462135 FBLN2P98095 1184 aa19.01■□□□□ 0.63
STX1A-206ENST00000462135 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
STX1A-206ENST00000462135 CHD1O14646 1710 aa19■□□□□ 0.63
STX1A-206ENST00000462135 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
STX1A-206ENST00000462135 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
STX1A-206ENST00000462135 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
STX1A-206ENST00000462135 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
STX1A-206ENST00000462135 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
STX1A-206ENST00000462135 DISP1Q96F81 1524 aa18.89■□□□□ 0.61
STX1A-206ENST00000462135 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
STX1A-206ENST00000462135 SHROOM2Q13796 1616 aa18.88■□□□□ 0.61
STX1A-206ENST00000462135 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
STX1A-206ENST00000462135 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
STX1A-206ENST00000462135 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.61
STX1A-206ENST00000462135 MAP3K1Q13233 1512 aa18.83■□□□□ 0.6
STX1A-206ENST00000462135 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
STX1A-206ENST00000462135 PRG4Q92954 1404 aaPredicted RBP18.78■□□□□ 0.6
STX1A-206ENST00000462135 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
STX1A-206ENST00000462135 APLP2Q06481 763 aa18.77■□□□□ 0.6
STX1A-206ENST00000462135 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
STX1A-206ENST00000462135 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
STX1A-206ENST00000462135 HECW1Q76N89 1606 aa18.71■□□□□ 0.58
STX1A-206ENST00000462135 TIAM1Q13009 1591 aa18.7■□□□□ 0.58
STX1A-206ENST00000462135 CFAP43Q8NDM7 1665 aa18.68■□□□□ 0.58
STX1A-206ENST00000462135 PTPRGP23470 1445 aa18.67■□□□□ 0.58
STX1A-206ENST00000462135 RAPGEF6Q8TEU7 1601 aa18.66■□□□□ 0.58
STX1A-206ENST00000462135 ABCA8O94911 1581 aa18.65■□□□□ 0.58
STX1A-206ENST00000462135 LRRC9Q6ZRR7 1453 aa18.62■□□□□ 0.57
STX1A-206ENST00000462135 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
STX1A-206ENST00000462135 NUP153P49790 1475 aaKnown RBP18.61■□□□□ 0.57
STX1A-206ENST00000462135 ERCC6L2Q5T890 1561 aa18.6■□□□□ 0.57
STX1A-206ENST00000462135 PLB1Q6P1J6 1458 aa18.59■□□□□ 0.57
STX1A-206ENST00000462135 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
STX1A-206ENST00000462135 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
STX1A-206ENST00000462135 UHRF1BP1LA0JNW5 1464 aa18.58■□□□□ 0.56
STX1A-206ENST00000462135 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
STX1A-206ENST00000462135 LRRIQ1Q96JM4 1722 aa18.55■□□□□ 0.56
STX1A-206ENST00000462135 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
STX1A-206ENST00000462135 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
STX1A-206ENST00000462135 ABCC2Q92887 1545 aa18.54■□□□□ 0.56
STX1A-206ENST00000462135 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
STX1A-206ENST00000462135 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
STX1A-206ENST00000462135 CDK13Q14004 1512 aaKnown RBP18.5■□□□□ 0.55
STX1A-206ENST00000462135 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
STX1A-206ENST00000462135 ATP10BO94823 1461 aa18.48■□□□□ 0.55
STX1A-206ENST00000462135 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
STX1A-206ENST00000462135 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
STX1A-206ENST00000462135 KDM5BQ9UGL1 1544 aa18.46■□□□□ 0.55
STX1A-206ENST00000462135 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
STX1A-206ENST00000462135 TROQ12816 1431 aaPredicted RBP18.45■□□□□ 0.54
STX1A-206ENST00000462135 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
STX1A-206ENST00000462135 RRBP1Q9P2E9 1410 aaKnown RBP18.43■□□□□ 0.54
STX1A-206ENST00000462135 NCOA2Q15596 1464 aa18.41■□□□□ 0.54
STX1A-206ENST00000462135 ADCY10Q96PN6 1610 aa18.4■□□□□ 0.54
STX1A-206ENST00000462135 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
STX1A-206ENST00000462135 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
STX1A-206ENST00000462135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.53
STX1A-206ENST00000462135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
STX1A-206ENST00000462135 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
STX1A-206ENST00000462135 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
STX1A-206ENST00000462135 MYOM3Q5VTT5 1437 aa18.35■□□□□ 0.53
STX1A-206ENST00000462135 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
STX1A-206ENST00000462135 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
STX1A-206ENST00000462135 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
STX1A-206ENST00000462135 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
STX1A-206ENST00000462135 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
STX1A-206ENST00000462135 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
STX1A-206ENST00000462135 KIF14Q15058 1648 aa18.34■□□□□ 0.53
STX1A-206ENST00000462135 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
STX1A-206ENST00000462135 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
STX1A-206ENST00000462135 ABCC10Q5T3U5 1492 aa18.29■□□□□ 0.52
STX1A-206ENST00000462135 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.52
STX1A-206ENST00000462135 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
STX1A-206ENST00000462135 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
STX1A-206ENST00000462135 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
STX1A-206ENST00000462135 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
STX1A-206ENST00000462135 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
STX1A-206ENST00000462135 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
STX1A-206ENST00000462135 ASXL2Q76L83 1435 aa18.21■□□□□ 0.51
STX1A-206ENST00000462135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.19■□□□□ 0.5
STX1A-206ENST00000462135 ARAP3Q8WWN8 1544 aa18.19■□□□□ 0.5
STX1A-206ENST00000462135 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
STX1A-206ENST00000462135 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
STX1A-206ENST00000462135 CDC42BPAQ5VT25 1732 aa18.16■□□□□ 0.5
STX1A-206ENST00000462135 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
STX1A-206ENST00000462135 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
STX1A-206ENST00000462135 TTC37Q6PGP7 1564 aa18.15■□□□□ 0.5
STX1A-206ENST00000462135 ABCA9Q8IUA7 1624 aa18.15■□□□□ 0.5
STX1A-206ENST00000462135 PLCH2O75038 1416 aa18.14■□□□□ 0.49
STX1A-206ENST00000462135 MYO5CQ9NQX4 1742 aa18.12■□□□□ 0.49
STX1A-206ENST00000462135 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms