RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
HDLBP-229ENST00000460826 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
HDLBP-229ENST00000460826 SHROOM2Q13796 1616 aa23.28■■□□□ 1.32
HDLBP-229ENST00000460826 KIAA0586Q9BVV6 1533 aa23.27■■□□□ 1.32
HDLBP-229ENST00000460826 KIF21BO75037 1637 aa23.23■■□□□ 1.31
HDLBP-229ENST00000460826 CTTNBP2Q8WZ74 1663 aa23.23■■□□□ 1.31
HDLBP-229ENST00000460826 ERCC6L2Q5T890 1561 aa23.22■■□□□ 1.31
HDLBP-229ENST00000460826 IQGAP2Q13576 1575 aa23.2■■□□□ 1.3
HDLBP-229ENST00000460826 JPH4Q96JJ6 628 aa23.18■■□□□ 1.3
HDLBP-229ENST00000460826 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
HDLBP-229ENST00000460826 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
HDLBP-229ENST00000460826 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
HDLBP-229ENST00000460826 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
HDLBP-229ENST00000460826 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
HDLBP-229ENST00000460826 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
HDLBP-229ENST00000460826 CYB5RLQ6IPT4 315 aa23.03■■□□□ 1.28
HDLBP-229ENST00000460826 KIAA0556O60303 1618 aa23■■□□□ 1.27
HDLBP-229ENST00000460826 CARMIL2Q6F5E8 1435 aa22.98■■□□□ 1.27
HDLBP-229ENST00000460826 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
HDLBP-229ENST00000460826 SAMD9Q5K651 1589 aa22.92■■□□□ 1.26
HDLBP-229ENST00000460826 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
HDLBP-229ENST00000460826 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
HDLBP-229ENST00000460826 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
HDLBP-229ENST00000460826 PTPRGP23470 1445 aa22.88■■□□□ 1.25
HDLBP-229ENST00000460826 P3H3Q8IVL6 736 aa22.85■■□□□ 1.25
HDLBP-229ENST00000460826 ADCY10Q96PN6 1610 aa22.82■■□□□ 1.24
HDLBP-229ENST00000460826 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
HDLBP-229ENST00000460826 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
HDLBP-229ENST00000460826 FHOD3Q2V2M9 1422 aa22.78■■□□□ 1.24
HDLBP-229ENST00000460826 ARHGAP35Q9NRY4 1499 aa22.77■■□□□ 1.24
HDLBP-229ENST00000460826 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
HDLBP-229ENST00000460826 PLB1Q6P1J6 1458 aa22.73■■□□□ 1.23
HDLBP-229ENST00000460826 ABCA8O94911 1581 aa22.72■■□□□ 1.23
HDLBP-229ENST00000460826 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
HDLBP-229ENST00000460826 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
HDLBP-229ENST00000460826 CLIP1P30622 1438 aa22.67■■□□□ 1.22
HDLBP-229ENST00000460826 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
HDLBP-229ENST00000460826 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
HDLBP-229ENST00000460826 ZCCHC11Q5TAX3 1644 aaKnown RBP22.62■■□□□ 1.21
HDLBP-229ENST00000460826 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
HDLBP-229ENST00000460826 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
HDLBP-229ENST00000460826 MAPKBP1O60336 1514 aa22.57■■□□□ 1.2
HDLBP-229ENST00000460826 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
HDLBP-229ENST00000460826 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
HDLBP-229ENST00000460826 ARID3CA6NKF2 412 aa22.54■■□□□ 1.2
HDLBP-229ENST00000460826 ATP10BO94823 1461 aa22.52■■□□□ 1.2
HDLBP-229ENST00000460826 PCF11O94913 1555 aaKnown RBP22.5■■□□□ 1.19
HDLBP-229ENST00000460826 KIF13AQ9H1H9 1805 aa22.5■■□□□ 1.19
HDLBP-229ENST00000460826 ASXL2Q76L83 1435 aa22.5■■□□□ 1.19
HDLBP-229ENST00000460826 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
HDLBP-229ENST00000460826 LRRIQ1Q96JM4 1722 aa22.48■■□□□ 1.19
HDLBP-229ENST00000460826 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
HDLBP-229ENST00000460826 DIP2BQ9P265 1576 aa22.46■■□□□ 1.19
HDLBP-229ENST00000460826 CASKIN1Q8WXD9 1431 aa22.45■■□□□ 1.18
HDLBP-229ENST00000460826 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
HDLBP-229ENST00000460826 ABCC10Q5T3U5 1492 aa22.44■■□□□ 1.18
HDLBP-229ENST00000460826 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
HDLBP-229ENST00000460826 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
HDLBP-229ENST00000460826 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
HDLBP-229ENST00000460826 FYCO1Q9BQS8 1478 aa22.41■■□□□ 1.18
HDLBP-229ENST00000460826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
HDLBP-229ENST00000460826 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
HDLBP-229ENST00000460826 FAM69CQ0P6D2 419 aa22.37■■□□□ 1.17
HDLBP-229ENST00000460826 GLI2P10070 1586 aa22.34■■□□□ 1.17
HDLBP-229ENST00000460826 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
HDLBP-229ENST00000460826 KCNH8Q96L42 1107 aa22.32■■□□□ 1.16
HDLBP-229ENST00000460826 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
HDLBP-229ENST00000460826 CCDC18Q5T9S5 1454 aa22.31■■□□□ 1.16
HDLBP-229ENST00000460826 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
HDLBP-229ENST00000460826 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
HDLBP-229ENST00000460826 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
HDLBP-229ENST00000460826 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
HDLBP-229ENST00000460826 CFAP43Q8NDM7 1665 aa22.25■■□□□ 1.15
HDLBP-229ENST00000460826 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
HDLBP-229ENST00000460826 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
HDLBP-229ENST00000460826 KIF14Q15058 1648 aa22.21■■□□□ 1.15
HDLBP-229ENST00000460826 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
HDLBP-229ENST00000460826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.14
HDLBP-229ENST00000460826 TTC37Q6PGP7 1564 aa22.2■■□□□ 1.14
HDLBP-229ENST00000460826 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
HDLBP-229ENST00000460826 CD109Q6YHK3 1445 aa22.17■■□□□ 1.14
HDLBP-229ENST00000460826 MTUS2Q5JR59 1369 aa22.11■■□□□ 1.13
HDLBP-229ENST00000460826 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
HDLBP-229ENST00000460826 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
HDLBP-229ENST00000460826 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
HDLBP-229ENST00000460826 TEX14Q8IWB6 1497 aa22.09■■□□□ 1.13
HDLBP-229ENST00000460826 LRRC9Q6ZRR7 1453 aa22.06■■□□□ 1.12
HDLBP-229ENST00000460826 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
HDLBP-229ENST00000460826 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
HDLBP-229ENST00000460826 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
HDLBP-229ENST00000460826 KDM6BO15054 1643 aa22.02■■□□□ 1.12
HDLBP-229ENST00000460826 PLCH2O75038 1416 aa22.02■■□□□ 1.12
HDLBP-229ENST00000460826 SUPT6HQ7KZ85 1726 aaKnown RBP22.02■■□□□ 1.12
HDLBP-229ENST00000460826 PREX2Q70Z35 1606 aa22.02■■□□□ 1.11
HDLBP-229ENST00000460826 APLP2Q06481 763 aa22■■□□□ 1.11
HDLBP-229ENST00000460826 COL17A1Q9UMD9 1497 aaPredicted RBP22■■□□□ 1.11
HDLBP-229ENST00000460826 ARAP3Q8WWN8 1544 aa21.99■■□□□ 1.11
HDLBP-229ENST00000460826 FANCAO15360 1455 aa21.98■■□□□ 1.11
HDLBP-229ENST00000460826 NCOA2Q15596 1464 aa21.98■■□□□ 1.11
HDLBP-229ENST00000460826 NEO1Q92859 1461 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms