RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 TNIKQ9UKE5 1360 aa17.41■□□□□ 0.38
FN1-214ENST00000460217 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
FN1-214ENST00000460217 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
FN1-214ENST00000460217 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
FN1-214ENST00000460217 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
FN1-214ENST00000460217 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
FN1-214ENST00000460217 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
FN1-214ENST00000460217 SHROOM2Q13796 1616 aa17.33■□□□□ 0.37
FN1-214ENST00000460217 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
FN1-214ENST00000460217 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
FN1-214ENST00000460217 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
FN1-214ENST00000460217 CEP162Q5TB80 1403 aa17.27■□□□□ 0.35
FN1-214ENST00000460217 SAMD9Q5K651 1589 aa17.26■□□□□ 0.35
FN1-214ENST00000460217 CLIP1P30622 1438 aa17.24■□□□□ 0.35
FN1-214ENST00000460217 DISP1Q96F81 1524 aa17.23■□□□□ 0.35
FN1-214ENST00000460217 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
FN1-214ENST00000460217 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
FN1-214ENST00000460217 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.34
FN1-214ENST00000460217 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.34
FN1-214ENST00000460217 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
FN1-214ENST00000460217 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
FN1-214ENST00000460217 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
FN1-214ENST00000460217 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
FN1-214ENST00000460217 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
FN1-214ENST00000460217 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
FN1-214ENST00000460217 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
FN1-214ENST00000460217 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
FN1-214ENST00000460217 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
FN1-214ENST00000460217 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
FN1-214ENST00000460217 PTPRGP23470 1445 aa17.06■□□□□ 0.32
FN1-214ENST00000460217 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
FN1-214ENST00000460217 ABCA8O94911 1581 aa17.01■□□□□ 0.31
FN1-214ENST00000460217 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
FN1-214ENST00000460217 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
FN1-214ENST00000460217 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
FN1-214ENST00000460217 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
FN1-214ENST00000460217 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
FN1-214ENST00000460217 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
FN1-214ENST00000460217 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
FN1-214ENST00000460217 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
FN1-214ENST00000460217 HECW1Q76N89 1606 aa16.96■□□□□ 0.3
FN1-214ENST00000460217 ABCC2Q92887 1545 aa16.96■□□□□ 0.3
FN1-214ENST00000460217 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
FN1-214ENST00000460217 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
FN1-214ENST00000460217 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
FN1-214ENST00000460217 LRRIQ1Q96JM4 1722 aa16.9■□□□□ 0.3
FN1-214ENST00000460217 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
FN1-214ENST00000460217 EPRSP07814 1512 aaKnown RBP16.88■□□□□ 0.29
FN1-214ENST00000460217 MAP3K1Q13233 1512 aa16.88■□□□□ 0.29
FN1-214ENST00000460217 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
FN1-214ENST00000460217 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
FN1-214ENST00000460217 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
FN1-214ENST00000460217 ATP10BO94823 1461 aa16.85■□□□□ 0.29
FN1-214ENST00000460217 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
FN1-214ENST00000460217 CDK13Q14004 1512 aaKnown RBP16.83■□□□□ 0.28
FN1-214ENST00000460217 ZCCHC11Q5TAX3 1644 aaKnown RBP16.83■□□□□ 0.28
FN1-214ENST00000460217 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
FN1-214ENST00000460217 APLP2Q06481 763 aa16.8■□□□□ 0.28
FN1-214ENST00000460217 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
FN1-214ENST00000460217 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
FN1-214ENST00000460217 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
FN1-214ENST00000460217 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
FN1-214ENST00000460217 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
FN1-214ENST00000460217 LRRC9Q6ZRR7 1453 aa16.75■□□□□ 0.27
FN1-214ENST00000460217 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
FN1-214ENST00000460217 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
FN1-214ENST00000460217 TROQ12816 1431 aaPredicted RBP16.73■□□□□ 0.27
FN1-214ENST00000460217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
FN1-214ENST00000460217 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
FN1-214ENST00000460217 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
FN1-214ENST00000460217 WDR7Q9Y4E6 1490 aa16.72■□□□□ 0.27
FN1-214ENST00000460217 ASXL2Q76L83 1435 aa16.71■□□□□ 0.27
FN1-214ENST00000460217 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
FN1-214ENST00000460217 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
FN1-214ENST00000460217 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
FN1-214ENST00000460217 KIF14Q15058 1648 aa16.67■□□□□ 0.26
FN1-214ENST00000460217 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
FN1-214ENST00000460217 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
FN1-214ENST00000460217 GLI2P10070 1586 aa16.6■□□□□ 0.25
FN1-214ENST00000460217 ABCA9Q8IUA7 1624 aa16.6■□□□□ 0.25
FN1-214ENST00000460217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
FN1-214ENST00000460217 DIP2BQ9P265 1576 aa16.59■□□□□ 0.25
FN1-214ENST00000460217 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
FN1-214ENST00000460217 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
FN1-214ENST00000460217 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
FN1-214ENST00000460217 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
FN1-214ENST00000460217 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
FN1-214ENST00000460217 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
FN1-214ENST00000460217 KIF13AQ9H1H9 1805 aa16.55■□□□□ 0.24
FN1-214ENST00000460217 MYO5CQ9NQX4 1742 aa16.55■□□□□ 0.24
FN1-214ENST00000460217 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
FN1-214ENST00000460217 PHLDB1Q86UU1 1377 aa16.54■□□□□ 0.24
FN1-214ENST00000460217 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
FN1-214ENST00000460217 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
FN1-214ENST00000460217 CCNB3Q8WWL7 1395 aa16.53■□□□□ 0.24
FN1-214ENST00000460217 PREX2Q70Z35 1606 aa16.53■□□□□ 0.24
FN1-214ENST00000460217 MAP3K4Q9Y6R4 1608 aa16.53■□□□□ 0.24
FN1-214ENST00000460217 CDC42BPBQ9Y5S2 1711 aa16.51■□□□□ 0.23
FN1-214ENST00000460217 PLCH2O75038 1416 aa16.51■□□□□ 0.23
FN1-214ENST00000460217 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms