RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 APLP2Q06481 763 aa8.7□□□□□ -1.02
PTBP3-207ENST00000458258 PTPRKQ15262 1439 aa8.7□□□□□ -1.02
PTBP3-207ENST00000458258 ERCC6Q03468 1493 aa8.68□□□□□ -1.02
PTBP3-207ENST00000458258 FOXD1Q16676 465 aa8.68□□□□□ -1.02
PTBP3-207ENST00000458258 DNMBPQ6XZF7 1577 aa8.68□□□□□ -1.02
PTBP3-207ENST00000458258 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
PTBP3-207ENST00000458258 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
PTBP3-207ENST00000458258 SNAPC4Q5SXM2 1469 aa8.65□□□□□ -1.02
PTBP3-207ENST00000458258 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
PTBP3-207ENST00000458258 NEUROD1Q13562 356 aa8.63□□□□□ -1.03
PTBP3-207ENST00000458258 KIF21AQ7Z4S6 1674 aa8.63□□□□□ -1.03
PTBP3-207ENST00000458258 JPH4Q96JJ6 628 aa8.63□□□□□ -1.03
PTBP3-207ENST00000458258 MAGI3Q5TCQ9 1506 aa8.63□□□□□ -1.03
PTBP3-207ENST00000458258 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
PTBP3-207ENST00000458258 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
PTBP3-207ENST00000458258 CDK13Q14004 1512 aaKnown RBP8.61□□□□□ -1.03
PTBP3-207ENST00000458258 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
PTBP3-207ENST00000458258 PLB1Q6P1J6 1458 aa8.6□□□□□ -1.03
PTBP3-207ENST00000458258 ERICH3Q5RHP9 1530 aa8.6□□□□□ -1.03
PTBP3-207ENST00000458258 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
PTBP3-207ENST00000458258 PRG4Q92954 1404 aaPredicted RBP8.59□□□□□ -1.03
PTBP3-207ENST00000458258 KCNH8Q96L42 1107 aa8.59□□□□□ -1.04
PTBP3-207ENST00000458258 CCNB3Q8WWL7 1395 aa8.58□□□□□ -1.04
PTBP3-207ENST00000458258 RAB3GAP2Q9H2M9 1393 aa8.57□□□□□ -1.04
PTBP3-207ENST00000458258 PCF11O94913 1555 aaKnown RBP8.56□□□□□ -1.04
PTBP3-207ENST00000458258 ERCC6L2Q5T890 1561 aa8.56□□□□□ -1.04
PTBP3-207ENST00000458258 LRRC9Q6ZRR7 1453 aa8.56□□□□□ -1.04
PTBP3-207ENST00000458258 FHAD1B1AJZ9 1412 aa8.56□□□□□ -1.04
PTBP3-207ENST00000458258 DISP1Q96F81 1524 aa8.55□□□□□ -1.04
PTBP3-207ENST00000458258 GRIN2BQ13224 1484 aa8.54□□□□□ -1.04
PTBP3-207ENST00000458258 MTUS2Q5JR59 1369 aa8.54□□□□□ -1.04
PTBP3-207ENST00000458258 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
PTBP3-207ENST00000458258 MIER1Q8N108 512 aa8.53□□□□□ -1.04
PTBP3-207ENST00000458258 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
PTBP3-207ENST00000458258 YTHDC1Q96MU7 727 aaKnown RBP8.52□□□□□ -1.04
PTBP3-207ENST00000458258 RRBP1Q9P2E9 1410 aaKnown RBP8.52□□□□□ -1.04
PTBP3-207ENST00000458258 GRIN2AQ12879 1464 aa8.51□□□□□ -1.05
PTBP3-207ENST00000458258 IFT140Q96RY7 1462 aa8.51□□□□□ -1.05
PTBP3-207ENST00000458258 SENP3Q9H4L4 574 aaPredicted RBP8.5□□□□□ -1.05
PTBP3-207ENST00000458258 HNRNPMP52272 730 aaKnown RBP eCLIP8.5□□□□□ -1.058e-6■□□□□ 8.6
PTBP3-207ENST00000458258 CASKIN1Q8WXD9 1431 aa8.49□□□□□ -1.05
PTBP3-207ENST00000458258 NUP153P49790 1475 aaKnown RBP8.49□□□□□ -1.05
PTBP3-207ENST00000458258 WDR62O43379 1518 aa8.49□□□□□ -1.05
PTBP3-207ENST00000458258 CNGB1Q14028 1251 aaPredicted RBP8.48□□□□□ -1.05
PTBP3-207ENST00000458258 NCOA2Q15596 1464 aa8.48□□□□□ -1.05
PTBP3-207ENST00000458258 TIAM1Q13009 1591 aa8.48□□□□□ -1.05
PTBP3-207ENST00000458258 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
PTBP3-207ENST00000458258 DENND4BO75064 1496 aaPredicted RBP8.48□□□□□ -1.05
PTBP3-207ENST00000458258 EIF4G3O43432 1585 aaKnown RBP8.47□□□□□ -1.05
PTBP3-207ENST00000458258 CEP170Q5SW79 1584 aa8.47□□□□□ -1.05
PTBP3-207ENST00000458258 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.05
PTBP3-207ENST00000458258 DIEXFQ68CQ4 756 aaKnown RBP8.46□□□□□ -1.06
PTBP3-207ENST00000458258 ADAMTS12P58397 1594 aa8.46□□□□□ -1.06
PTBP3-207ENST00000458258 KIAA0586Q9BVV6 1533 aa8.45□□□□□ -1.06
PTBP3-207ENST00000458258 TRIM52Q96A61 297 aa8.45□□□□□ -1.06
PTBP3-207ENST00000458258 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
PTBP3-207ENST00000458258 MAPKBP1O60336 1514 aa8.44□□□□□ -1.06
PTBP3-207ENST00000458258 WDR97A6NE52 1622 aa8.43□□□□□ -1.06
PTBP3-207ENST00000458258 KDM6BO15054 1643 aa8.43□□□□□ -1.06
PTBP3-207ENST00000458258 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
PTBP3-207ENST00000458258 NUP160Q12769 1436 aa8.43□□□□□ -1.06
PTBP3-207ENST00000458258 C11orf95C9JLR9 678 aaPredicted RBP8.43□□□□□ -1.06
PTBP3-207ENST00000458258 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
PTBP3-207ENST00000458258 AFAP1Q8N556 730 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 NAIPQ13075 1403 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 FMN1Q68DA7 1419 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
PTBP3-207ENST00000458258 SYNJ2O15056 1496 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 ATP10BO94823 1461 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 PTPRGP23470 1445 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 SETD5Q9C0A6 1442 aa8.41□□□□□ -1.06
PTBP3-207ENST00000458258 DDX10Q13206 875 aaKnown RBP8.39□□□□□ -1.07
PTBP3-207ENST00000458258 SCAF1Q9H7N4 1312 aaKnown RBP8.39□□□□□ -1.07
PTBP3-207ENST00000458258 MYOM3Q5VTT5 1437 aa8.39□□□□□ -1.07
PTBP3-207ENST00000458258 ZEB1P37275 1124 aaPredicted RBP8.39□□□□□ -1.07
PTBP3-207ENST00000458258 IQGAP2Q13576 1575 aa8.38□□□□□ -1.07
PTBP3-207ENST00000458258 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
PTBP3-207ENST00000458258 ABCC5O15440 1437 aa8.38□□□□□ -1.07
PTBP3-207ENST00000458258 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
PTBP3-207ENST00000458258 ARHGEF11O15085 1522 aa8.37□□□□□ -1.07
PTBP3-207ENST00000458258 ZNF326Q5BKZ1 582 aaKnown RBP8.37□□□□□ -1.07
PTBP3-207ENST00000458258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.37□□□□□ -1.075e-8■□□□□ 10.5
PTBP3-207ENST00000458258 SAMD9Q5K651 1589 aa8.37□□□□□ -1.07
PTBP3-207ENST00000458258 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
PTBP3-207ENST00000458258 L3MBTL2Q969R5 705 aa8.37□□□□□ -1.07
PTBP3-207ENST00000458258 PLEKHD1A6NEE1 506 aa8.36□□□□□ -1.07
PTBP3-207ENST00000458258 PPP1R15AO75807 674 aaPredicted RBP8.36□□□□□ -1.07
PTBP3-207ENST00000458258 MPHOSPH9Q99550 1183 aa8.36□□□□□ -1.07
PTBP3-207ENST00000458258 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
PTBP3-207ENST00000458258 UGGT2Q9NYU1 1516 aa8.33□□□□□ -1.08
PTBP3-207ENST00000458258 GPATCH8Q9UKJ3 1502 aaKnown RBP8.33□□□□□ -1.08
PTBP3-207ENST00000458258 KIAA0556O60303 1618 aa8.33□□□□□ -1.08
PTBP3-207ENST00000458258 RGL3Q3MIN7 710 aa8.33□□□□□ -1.08
PTBP3-207ENST00000458258 ARHGEF12Q9NZN5 1544 aa8.32□□□□□ -1.08
PTBP3-207ENST00000458258 PKD2Q13563 968 aa8.32□□□□□ -1.08
PTBP3-207ENST00000458258 KDM2AQ9Y2K7 1162 aa8.32□□□□□ -1.08
PTBP3-207ENST00000458258 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
PTBP3-207ENST00000458258 KIF14Q15058 1648 aa8.32□□□□□ -1.08
PTBP3-207ENST00000458258 SLC4A1APQ9BWU0 796 aaKnown RBP8.31□□□□□ -1.08
PTBP3-207ENST00000458258 EFCAB5A4FU69 1503 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms