RNA–Protein interactions for RNA: ENST00000458167.6

GPN1-205, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2 BASIC

Gene GPN1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-205ENST00000458167 MSH5O43196 834 aa9.87□□□□□ -0.83
GPN1-205ENST00000458167 CEP170Q5SW79 1584 aa9.87□□□□□ -0.83
GPN1-205ENST00000458167 MAPKBP1O60336 1514 aa9.87□□□□□ -0.83
GPN1-205ENST00000458167 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
GPN1-205ENST00000458167 TDRD9Q8NDG6 1382 aaKnown RBP9.86□□□□□ -0.83
GPN1-205ENST00000458167 PIAS4Q8N2W9 510 aaPredicted RBP9.85□□□□□ -0.83
GPN1-205ENST00000458167 SHROOM2Q13796 1616 aa9.84□□□□□ -0.83
GPN1-205ENST00000458167 PBRM1Q86U86 1689 aa9.84□□□□□ -0.83
GPN1-205ENST00000458167 RAD54L2Q9Y4B4 1467 aa9.84□□□□□ -0.83
GPN1-205ENST00000458167 SUPT5HO00267 1087 aaKnown RBP9.83□□□□□ -0.84
GPN1-205ENST00000458167 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
GPN1-205ENST00000458167 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
GPN1-205ENST00000458167 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
GPN1-205ENST00000458167 TOP2BQ02880 1626 aa9.79□□□□□ -0.84
GPN1-205ENST00000458167 PPP6R1Q9UPN7 881 aa9.79□□□□□ -0.84
GPN1-205ENST00000458167 ADRA2BP18089 450 aa9.78□□□□□ -0.84
GPN1-205ENST00000458167 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
GPN1-205ENST00000458167 SOGA1O94964 1423 aa9.77□□□□□ -0.85
GPN1-205ENST00000458167 ADCY10Q96PN6 1610 aa9.75□□□□□ -0.85
GPN1-205ENST00000458167 TRIM26Q12899 539 aaPredicted RBP9.73□□□□□ -0.85
GPN1-205ENST00000458167 COL17A1Q9UMD9 1497 aaPredicted RBP9.71□□□□□ -0.85
GPN1-205ENST00000458167 NUP160Q12769 1436 aa9.71□□□□□ -0.86
GPN1-205ENST00000458167 GRIN2AQ12879 1464 aa9.71□□□□□ -0.86
GPN1-205ENST00000458167 PPARGC1BQ86YN6 1023 aaKnown RBP9.69□□□□□ -0.86
GPN1-205ENST00000458167 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
GPN1-205ENST00000458167 FGD5Q6ZNL6 1462 aa9.69□□□□□ -0.86
GPN1-205ENST00000458167 NPM1P06748 294 aaKnown RBP eCLIP9.67□□□□□ -0.86
GPN1-205ENST00000458167 PCF11O94913 1555 aaKnown RBP9.67□□□□□ -0.86
GPN1-205ENST00000458167 ABCA5Q8WWZ7 1642 aa9.67□□□□□ -0.86
GPN1-205ENST00000458167 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
GPN1-205ENST00000458167 GLI2P10070 1586 aa9.64□□□□□ -0.87
GPN1-205ENST00000458167 PRG4Q92954 1404 aaPredicted RBP9.64□□□□□ -0.87
GPN1-205ENST00000458167 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
GPN1-205ENST00000458167 KIF21BO75037 1637 aa9.63□□□□□ -0.87
GPN1-205ENST00000458167 MAP3K4Q9Y6R4 1608 aa9.61□□□□□ -0.87
GPN1-205ENST00000458167 ADAMTSL3P82987 1691 aa9.61□□□□□ -0.87
GPN1-205ENST00000458167 PTPRMP28827 1452 aa9.6□□□□□ -0.87
GPN1-205ENST00000458167 SCAF1Q9H7N4 1312 aaKnown RBP9.6□□□□□ -0.87
GPN1-205ENST00000458167 TTBK1Q5TCY1 1321 aaPredicted RBP9.59□□□□□ -0.87
GPN1-205ENST00000458167 CUX1P39880 1505 aa9.56□□□□□ -0.88
GPN1-205ENST00000458167 TEX14Q8IWB6 1497 aa9.54□□□□□ -0.88
GPN1-205ENST00000458167 ABCA10Q8WWZ4 1543 aa9.54□□□□□ -0.88
GPN1-205ENST00000458167 CUL7Q14999 1698 aa9.53□□□□□ -0.88
GPN1-205ENST00000458167 RUSC2Q8N2Y8 1516 aa9.53□□□□□ -0.88
GPN1-205ENST00000458167 JPH4Q96JJ6 628 aa9.53□□□□□ -0.88
GPN1-205ENST00000458167 ASXL2Q76L83 1435 aa9.51□□□□□ -0.89
GPN1-205ENST00000458167 CENPBP07199 599 aaPredicted RBP9.51□□□□□ -0.89
GPN1-205ENST00000458167 MADDQ8WXG6 1647 aa9.51□□□□□ -0.89
GPN1-205ENST00000458167 PLB1Q6P1J6 1458 aa9.5□□□□□ -0.89
GPN1-205ENST00000458167 BCORL1Q5H9F3 1711 aa9.49□□□□□ -0.89
GPN1-205ENST00000458167 KIAA0586Q9BVV6 1533 aa9.49□□□□□ -0.89
GPN1-205ENST00000458167 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
GPN1-205ENST00000458167 HSPA2P54652 639 aa9.49□□□□□ -0.89
GPN1-205ENST00000458167 FHAD1B1AJZ9 1412 aa9.48□□□□□ -0.89
GPN1-205ENST00000458167 ABCC2Q92887 1545 aa9.47□□□□□ -0.89
GPN1-205ENST00000458167 EPRSP07814 1512 aaKnown RBP9.47□□□□□ -0.89
GPN1-205ENST00000458167 RIMS1Q86UR5 1692 aaKnown RBP9.46□□□□□ -0.89
GPN1-205ENST00000458167 STRCQ7RTU9 1775 aa9.45□□□□□ -0.9
GPN1-205ENST00000458167 MED1Q15648 1581 aaPredicted RBP9.44□□□□□ -0.9
GPN1-205ENST00000458167 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
GPN1-205ENST00000458167 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
GPN1-205ENST00000458167 IQSEC2Q5JU85 1478 aa9.39□□□□□ -0.91
GPN1-205ENST00000458167 ZCCHC11Q5TAX3 1644 aaKnown RBP9.37□□□□□ -0.91
GPN1-205ENST00000458167 LTBP4Q8N2S1 1624 aa9.37□□□□□ -0.91
GPN1-205ENST00000458167 MAGI3Q5TCQ9 1506 aa9.37□□□□□ -0.91
GPN1-205ENST00000458167 UHRF1BP1LA0JNW5 1464 aa9.36□□□□□ -0.91
GPN1-205ENST00000458167 PREX1Q8TCU6 1659 aa9.36□□□□□ -0.91
GPN1-205ENST00000458167 PTPRGP23470 1445 aa9.35□□□□□ -0.91
GPN1-205ENST00000458167 CLSPNQ9HAW4 1339 aa9.35□□□□□ -0.91
GPN1-205ENST00000458167 KDM5BQ9UGL1 1544 aa9.33□□□□□ -0.92
GPN1-205ENST00000458167 LOC105371045A0A1W2PR82 267 aa9.33□□□□□ -0.92
GPN1-205ENST00000458167 ARAP3Q8WWN8 1544 aa9.33□□□□□ -0.92
GPN1-205ENST00000458167 YEATS2Q9ULM3 1422 aa9.32□□□□□ -0.92
GPN1-205ENST00000458167 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
GPN1-205ENST00000458167 FER1L4A9Z1Z3 1794 aa9.3□□□□□ -0.92
GPN1-205ENST00000458167 GTF3C3Q9Y5Q9 886 aa9.3□□□□□ -0.92
GPN1-205ENST00000458167 DMRT2Q9Y5R5 561 aa9.3□□□□□ -0.92
GPN1-205ENST00000458167 CD109Q6YHK3 1445 aa9.29□□□□□ -0.92
GPN1-205ENST00000458167 WDR7Q9Y4E6 1490 aa9.28□□□□□ -0.92
GPN1-205ENST00000458167 TTC37Q6PGP7 1564 aa9.28□□□□□ -0.92
GPN1-205ENST00000458167 WRNQ14191 1432 aaPredicted RBP eCLIP9.27□□□□□ -0.92
GPN1-205ENST00000458167 UACAQ9BZF9 1416 aa9.27□□□□□ -0.92
GPN1-205ENST00000458167 TNIKQ9UKE5 1360 aa9.27□□□□□ -0.93
GPN1-205ENST00000458167 SIGLEC1Q9BZZ2 1709 aa9.26□□□□□ -0.93
GPN1-205ENST00000458167 PTPRTO14522 1441 aa9.26□□□□□ -0.93
GPN1-205ENST00000458167 FRMPD1Q5SYB0 1578 aa9.25□□□□□ -0.93
GPN1-205ENST00000458167 DIEXFQ68CQ4 756 aaKnown RBP9.25□□□□□ -0.93
GPN1-205ENST00000458167 SETD1BQ9UPS6 1966 aaKnown RBP9.25□□□□□ -0.93
GPN1-205ENST00000458167 ARHGEF40Q8TER5 1519 aa9.24□□□□□ -0.93
GPN1-205ENST00000458167 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
GPN1-205ENST00000458167 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
GPN1-205ENST00000458167 UBAP1LF5GYI3 381 aa9.21□□□□□ -0.93
GPN1-205ENST00000458167 CARMIL2Q6F5E8 1435 aa9.21□□□□□ -0.93
GPN1-205ENST00000458167 HSPA1LP34931 641 aa9.2□□□□□ -0.94
GPN1-205ENST00000458167 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
GPN1-205ENST00000458167 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
GPN1-205ENST00000458167 RICTORQ6R327 1708 aa9.17□□□□□ -0.94
GPN1-205ENST00000458167 RAPGEF3O95398 923 aa9.17□□□□□ -0.94
GPN1-205ENST00000458167 CCER1Q8TC90 406 aaPredicted RBP9.17□□□□□ -0.94
GPN1-205ENST00000458167 FANCAO15360 1455 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms