RNA–Protein interactions for RNA: ENST00000457788.5

COL11A2-205, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 5

Gene COL11A2, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-205ENST00000457788 CLIP1P30622 1438 aa26.09■■□□□ 1.77
COL11A2-205ENST00000457788 MAGI1Q96QZ7 1491 aaPredicted RBP26.05■■□□□ 1.76
COL11A2-205ENST00000457788 CTTNBP2Q8WZ74 1663 aa26.04■■□□□ 1.76
COL11A2-205ENST00000457788 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
COL11A2-205ENST00000457788 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
COL11A2-205ENST00000457788 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
COL11A2-205ENST00000457788 GRIN2AQ12879 1464 aa25.95■■□□□ 1.74
COL11A2-205ENST00000457788 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
COL11A2-205ENST00000457788 FBLN2P98095 1184 aa25.91■■□□□ 1.74
COL11A2-205ENST00000457788 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.74
COL11A2-205ENST00000457788 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
COL11A2-205ENST00000457788 IQGAP2Q13576 1575 aa25.82■■□□□ 1.72
COL11A2-205ENST00000457788 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
COL11A2-205ENST00000457788 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
COL11A2-205ENST00000457788 EFCAB5A4FU69 1503 aa25.78■■□□□ 1.72
COL11A2-205ENST00000457788 CHD1O14646 1710 aa25.78■■□□□ 1.72
COL11A2-205ENST00000457788 KIAA0586Q9BVV6 1533 aa25.77■■□□□ 1.72
COL11A2-205ENST00000457788 NUP160Q12769 1436 aa25.75■■□□□ 1.71
COL11A2-205ENST00000457788 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
COL11A2-205ENST00000457788 TRIM26Q12899 539 aaPredicted RBP25.73■■□□□ 1.71
COL11A2-205ENST00000457788 SAMD9Q5K651 1589 aa25.73■■□□□ 1.71
COL11A2-205ENST00000457788 FHOD3Q2V2M9 1422 aa25.7■■□□□ 1.71
COL11A2-205ENST00000457788 UGGT2Q9NYU1 1516 aa25.67■■□□□ 1.7
COL11A2-205ENST00000457788 APLP2Q06481 763 aa25.57■■□□□ 1.68
COL11A2-205ENST00000457788 DISP1Q96F81 1524 aa25.56■■□□□ 1.68
COL11A2-205ENST00000457788 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
COL11A2-205ENST00000457788 JPH4Q96JJ6 628 aa25.56■■□□□ 1.68
COL11A2-205ENST00000457788 FMN1Q68DA7 1419 aa25.55■■□□□ 1.68
COL11A2-205ENST00000457788 PCF11O94913 1555 aaKnown RBP25.55■■□□□ 1.68
COL11A2-205ENST00000457788 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
COL11A2-205ENST00000457788 FYCO1Q9BQS8 1478 aa25.47■■□□□ 1.67
COL11A2-205ENST00000457788 CASKIN1Q8WXD9 1431 aa25.47■■□□□ 1.67
COL11A2-205ENST00000457788 CARMIL2Q6F5E8 1435 aa25.47■■□□□ 1.67
COL11A2-205ENST00000457788 ATP1B4Q9UN42 357 aaPredicted RBP25.46■■□□□ 1.67
COL11A2-205ENST00000457788 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
COL11A2-205ENST00000457788 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
COL11A2-205ENST00000457788 PRG4Q92954 1404 aaPredicted RBP25.42■■□□□ 1.66
COL11A2-205ENST00000457788 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
COL11A2-205ENST00000457788 TIAM1Q13009 1591 aa25.4■■□□□ 1.66
COL11A2-205ENST00000457788 MAP3K1Q13233 1512 aa25.37■■□□□ 1.65
COL11A2-205ENST00000457788 KANK4Q5T7N3 995 aaPredicted RBP25.36■■□□□ 1.65
COL11A2-205ENST00000457788 CFAP43Q8NDM7 1665 aa25.36■■□□□ 1.65
COL11A2-205ENST00000457788 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
COL11A2-205ENST00000457788 HECW1Q76N89 1606 aa25.33■■□□□ 1.65
COL11A2-205ENST00000457788 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
COL11A2-205ENST00000457788 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
COL11A2-205ENST00000457788 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
COL11A2-205ENST00000457788 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
COL11A2-205ENST00000457788 PLB1Q6P1J6 1458 aa25.26■■□□□ 1.63
COL11A2-205ENST00000457788 CCDC18Q5T9S5 1454 aa25.24■■□□□ 1.63
COL11A2-205ENST00000457788 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
COL11A2-205ENST00000457788 PTPRGP23470 1445 aa25.23■■□□□ 1.63
COL11A2-205ENST00000457788 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
COL11A2-205ENST00000457788 ARID3CA6NKF2 412 aa25.21■■□□□ 1.63
COL11A2-205ENST00000457788 CDK13Q14004 1512 aaKnown RBP25.2■■□□□ 1.62
COL11A2-205ENST00000457788 ABCA8O94911 1581 aa25.18■■□□□ 1.62
COL11A2-205ENST00000457788 CENPBP07199 599 aaPredicted RBP25.18■■□□□ 1.62
COL11A2-205ENST00000457788 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
COL11A2-205ENST00000457788 MAGI3Q5TCQ9 1506 aa25.11■■□□□ 1.61
COL11A2-205ENST00000457788 EHBP1L1Q8N3D4 1523 aa25.11■■□□□ 1.61
COL11A2-205ENST00000457788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
COL11A2-205ENST00000457788 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
COL11A2-205ENST00000457788 UACAQ9BZF9 1416 aa25.08■■□□□ 1.61
COL11A2-205ENST00000457788 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
COL11A2-205ENST00000457788 SUPT6HQ7KZ85 1726 aaKnown RBP25.04■■□□□ 1.6
COL11A2-205ENST00000457788 PHLDB1Q86UU1 1377 aa25.04■■□□□ 1.6
COL11A2-205ENST00000457788 GTF3C3Q9Y5Q9 886 aa25.02■■□□□ 1.6
COL11A2-205ENST00000457788 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
COL11A2-205ENST00000457788 ATP10BO94823 1461 aa25.02■■□□□ 1.6
COL11A2-205ENST00000457788 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
COL11A2-205ENST00000457788 NCOA2Q15596 1464 aa25■■□□□ 1.59
COL11A2-205ENST00000457788 RRBP1Q9P2E9 1410 aaKnown RBP25■■□□□ 1.59
COL11A2-205ENST00000457788 CCNB3Q8WWL7 1395 aa24.95■■□□□ 1.58
COL11A2-205ENST00000457788 TROQ12816 1431 aaPredicted RBP24.94■■□□□ 1.58
COL11A2-205ENST00000457788 UHRF1BP1LA0JNW5 1464 aa24.94■■□□□ 1.58
COL11A2-205ENST00000457788 ARHGEF11O15085 1522 aa24.94■■□□□ 1.58
COL11A2-205ENST00000457788 PLEKHD1A6NEE1 506 aa24.9■■□□□ 1.58
COL11A2-205ENST00000457788 ADCY10Q96PN6 1610 aa24.89■■□□□ 1.57
COL11A2-205ENST00000457788 MYOM3Q5VTT5 1437 aa24.88■■□□□ 1.57
COL11A2-205ENST00000457788 ZCCHC11Q5TAX3 1644 aaKnown RBP24.87■■□□□ 1.57
COL11A2-205ENST00000457788 FGD6Q6ZV73 1430 aa24.87■■□□□ 1.57
COL11A2-205ENST00000457788 KIF14Q15058 1648 aa24.86■■□□□ 1.57
COL11A2-205ENST00000457788 KDM5BQ9UGL1 1544 aa24.85■■□□□ 1.57
COL11A2-205ENST00000457788 FAM50AQ14320 339 aaKnown RBP24.83■■□□□ 1.57
COL11A2-205ENST00000457788 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
COL11A2-205ENST00000457788 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
COL11A2-205ENST00000457788 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
COL11A2-205ENST00000457788 ITGAEP38570 1179 aa24.78■■□□□ 1.56
COL11A2-205ENST00000457788 PTPN23Q9H3S7 1636 aa24.77■■□□□ 1.56
COL11A2-205ENST00000457788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.557e-7■■■■■ 52.8
COL11A2-205ENST00000457788 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
COL11A2-205ENST00000457788 ITSN2Q9NZM3 1697 aa24.74■■□□□ 1.55
COL11A2-205ENST00000457788 ABCC10Q5T3U5 1492 aa24.73■■□□□ 1.55
COL11A2-205ENST00000457788 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
COL11A2-205ENST00000457788 CDC42BPAQ5VT25 1732 aa24.7■■□□□ 1.54
COL11A2-205ENST00000457788 TCOF1Q13428 1488 aaKnown RBP24.69■■□□□ 1.54
COL11A2-205ENST00000457788 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
COL11A2-205ENST00000457788 KCNH8Q96L42 1107 aa24.68■■□□□ 1.54
COL11A2-205ENST00000457788 NPM1P06748 294 aaKnown RBP eCLIP24.66■■□□□ 1.54
COL11A2-205ENST00000457788 CFDP1Q9UEE9 299 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms