RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 JPH4Q96JJ6 628 aa30.11■■■□□ 2.41
TRIM13-206ENST00000457662 RIMBP3CA6NJZ7 1639 aa30.07■■■□□ 2.4
TRIM13-206ENST00000457662 RIMBP3BA6NNM3 1639 aa30.07■■■□□ 2.4
TRIM13-206ENST00000457662 RIMBP3Q9UFD9 1639 aa30.07■■■□□ 2.4
TRIM13-206ENST00000457662 SHROOM2Q13796 1616 aa30.03■■■□□ 2.4
TRIM13-206ENST00000457662 PRG4Q92954 1404 aaPredicted RBP29.97■■■□□ 2.39
TRIM13-206ENST00000457662 IQGAP2Q13576 1575 aa29.95■■■□□ 2.38
TRIM13-206ENST00000457662 KIF21BO75037 1637 aa29.94■■■□□ 2.38
TRIM13-206ENST00000457662 CYB5RLQ6IPT4 315 aa29.92■■■□□ 2.38
TRIM13-206ENST00000457662 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
TRIM13-206ENST00000457662 ERCC6L2Q5T890 1561 aa29.89■■■□□ 2.37
TRIM13-206ENST00000457662 CTTNBP2Q8WZ74 1663 aa29.87■■■□□ 2.37
TRIM13-206ENST00000457662 CARMIL2Q6F5E8 1435 aa29.82■■■□□ 2.36
TRIM13-206ENST00000457662 GOLGA3Q08378 1498 aa29.81■■■□□ 2.36
TRIM13-206ENST00000457662 UGGT2Q9NYU1 1516 aa29.81■■■□□ 2.36
TRIM13-206ENST00000457662 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
TRIM13-206ENST00000457662 EHMT2Q96KQ7 1210 aa29.8■■■□□ 2.36
TRIM13-206ENST00000457662 DISP1Q96F81 1524 aa29.72■■■□□ 2.35
TRIM13-206ENST00000457662 TNIKQ9UKE5 1360 aa29.7■■■□□ 2.34
TRIM13-206ENST00000457662 PTPRGP23470 1445 aa29.67■■■□□ 2.34
TRIM13-206ENST00000457662 KIAA0556O60303 1618 aa29.64■■■□□ 2.34
TRIM13-206ENST00000457662 TTBK1Q5TCY1 1321 aaPredicted RBP29.61■■■□□ 2.33
TRIM13-206ENST00000457662 RANGAP1P46060 587 aaPredicted RBP29.61■■■□□ 2.33
TRIM13-206ENST00000457662 P3H3Q8IVL6 736 aa29.55■■■□□ 2.32
TRIM13-206ENST00000457662 SAMD9Q5K651 1589 aa29.53■■■□□ 2.32
TRIM13-206ENST00000457662 EFCAB5A4FU69 1503 aa29.48■■■□□ 2.31
TRIM13-206ENST00000457662 UACAQ9BZF9 1416 aa29.46■■■□□ 2.31
TRIM13-206ENST00000457662 NPM1P06748 294 aaKnown RBP eCLIP29.45■■■□□ 2.31
TRIM13-206ENST00000457662 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
TRIM13-206ENST00000457662 UHRF1BP1LA0JNW5 1464 aa29.41■■■□□ 2.3
TRIM13-206ENST00000457662 ADCY10Q96PN6 1610 aa29.41■■■□□ 2.3
TRIM13-206ENST00000457662 FHOD3Q2V2M9 1422 aa29.39■■■□□ 2.3
TRIM13-206ENST00000457662 ARHGAP35Q9NRY4 1499 aa29.37■■■□□ 2.29
TRIM13-206ENST00000457662 PLB1Q6P1J6 1458 aa29.36■■■□□ 2.29
TRIM13-206ENST00000457662 ABCC2Q92887 1545 aa29.36■■■□□ 2.29
TRIM13-206ENST00000457662 ABCA8O94911 1581 aa29.32■■■□□ 2.28
TRIM13-206ENST00000457662 CLIP1P30622 1438 aa29.3■■■□□ 2.28
TRIM13-206ENST00000457662 KDM5BQ9UGL1 1544 aa29.25■■■□□ 2.27
TRIM13-206ENST00000457662 FMN1Q68DA7 1419 aa29.25■■■□□ 2.27
TRIM13-206ENST00000457662 TRHP20396 242 aaPredicted RBP29.23■■■□□ 2.27
TRIM13-206ENST00000457662 CEP162Q5TB80 1403 aa29.21■■■□□ 2.27
TRIM13-206ENST00000457662 MAPKBP1O60336 1514 aa29.21■■■□□ 2.27
TRIM13-206ENST00000457662 RAPGEF6Q8TEU7 1601 aa29.21■■■□□ 2.27
TRIM13-206ENST00000457662 ZCCHC11Q5TAX3 1644 aaKnown RBP29.15■■■□□ 2.26
TRIM13-206ENST00000457662 ASXL2Q76L83 1435 aa29.13■■■□□ 2.25
TRIM13-206ENST00000457662 ATP10BO94823 1461 aa29.13■■■□□ 2.25
TRIM13-206ENST00000457662 ARID3CA6NKF2 412 aa29.12■■■□□ 2.25
TRIM13-206ENST00000457662 NUP153P49790 1475 aaKnown RBP29.12■■■□□ 2.25
TRIM13-206ENST00000457662 ATP1B4Q9UN42 357 aaPredicted RBP29.1■■■□□ 2.25
TRIM13-206ENST00000457662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
TRIM13-206ENST00000457662 HNRNPUL2Q1KMD3 747 aaKnown RBP29.09■■■□□ 2.25
TRIM13-206ENST00000457662 ABCC10Q5T3U5 1492 aa29.07■■■□□ 2.24
TRIM13-206ENST00000457662 FAM69CQ0P6D2 419 aa29.05■■■□□ 2.24
TRIM13-206ENST00000457662 CASKIN1Q8WXD9 1431 aa29.03■■■□□ 2.24
TRIM13-206ENST00000457662 HECW1Q76N89 1606 aa29.01■■■□□ 2.24
TRIM13-206ENST00000457662 WDR7Q9Y4E6 1490 aa29.01■■■□□ 2.23
TRIM13-206ENST00000457662 DIP2BQ9P265 1576 aa28.98■■■□□ 2.23
TRIM13-206ENST00000457662 PLEKHD1A6NEE1 506 aa28.97■■■□□ 2.23
TRIM13-206ENST00000457662 EPRSP07814 1512 aaKnown RBP28.97■■■□□ 2.23
TRIM13-206ENST00000457662 KCNH8Q96L42 1107 aa28.96■■■□□ 2.23
TRIM13-206ENST00000457662 KIF13AQ9H1H9 1805 aa28.95■■■□□ 2.23
TRIM13-206ENST00000457662 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
TRIM13-206ENST00000457662 PCF11O94913 1555 aaKnown RBP28.94■■■□□ 2.22
TRIM13-206ENST00000457662 CDK11AQ9UQ88 783 aaPredicted RBP28.93■■■□□ 2.22
TRIM13-206ENST00000457662 CDK13Q14004 1512 aaKnown RBP28.92■■■□□ 2.22
TRIM13-206ENST00000457662 GLI2P10070 1586 aa28.91■■■□□ 2.22
TRIM13-206ENST00000457662 CCDC18Q5T9S5 1454 aa28.88■■■□□ 2.21
TRIM13-206ENST00000457662 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
TRIM13-206ENST00000457662 LRRIQ1Q96JM4 1722 aa28.82■■■□□ 2.2
TRIM13-206ENST00000457662 CD109Q6YHK3 1445 aa28.76■■■□□ 2.19
TRIM13-206ENST00000457662 MAP3K4Q9Y6R4 1608 aa28.75■■■□□ 2.19
TRIM13-206ENST00000457662 TROQ12816 1431 aaPredicted RBP28.75■■■□□ 2.19
TRIM13-206ENST00000457662 TSPOAP1O95153 1857 aa28.73■■■□□ 2.19
TRIM13-206ENST00000457662 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
TRIM13-206ENST00000457662 ABCA9Q8IUA7 1624 aa28.71■■■□□ 2.19
TRIM13-206ENST00000457662 MAGI3Q5TCQ9 1506 aa28.66■■■□□ 2.18
TRIM13-206ENST00000457662 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
TRIM13-206ENST00000457662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.65■■■□□ 2.18
TRIM13-206ENST00000457662 MTUS2Q5JR59 1369 aa28.64■■■□□ 2.18
TRIM13-206ENST00000457662 PPRC1Q5VV67 1664 aaKnown RBP28.64■■■□□ 2.17
TRIM13-206ENST00000457662 APLP2Q06481 763 aa28.63■■■□□ 2.17
TRIM13-206ENST00000457662 KIF14Q15058 1648 aa28.61■■■□□ 2.17
TRIM13-206ENST00000457662 MAP3K1Q13233 1512 aa28.6■■■□□ 2.17
TRIM13-206ENST00000457662 TIAM1Q13009 1591 aa28.59■■■□□ 2.17
TRIM13-206ENST00000457662 TTC37Q6PGP7 1564 aa28.57■■■□□ 2.16
TRIM13-206ENST00000457662 PLCH2O75038 1416 aa28.54■■■□□ 2.16
TRIM13-206ENST00000457662 PHLDB1Q86UU1 1377 aa28.53■■■□□ 2.16
TRIM13-206ENST00000457662 EHBP1L1Q8N3D4 1523 aa28.53■■■□□ 2.16
TRIM13-206ENST00000457662 LRRC9Q6ZRR7 1453 aa28.49■■■□□ 2.15
TRIM13-206ENST00000457662 NEO1Q92859 1461 aa28.49■■■□□ 2.15
TRIM13-206ENST00000457662 KANK4Q5T7N3 995 aaPredicted RBP28.48■■■□□ 2.15
TRIM13-206ENST00000457662 EFCAB2Q5VUJ9 269 aa28.48■■■□□ 2.15
TRIM13-206ENST00000457662 MYO5CQ9NQX4 1742 aa28.46■■■□□ 2.15
TRIM13-206ENST00000457662 FANCAO15360 1455 aa28.46■■■□□ 2.15
TRIM13-206ENST00000457662 ARAP3Q8WWN8 1544 aa28.46■■■□□ 2.15
TRIM13-206ENST00000457662 KDM6BO15054 1643 aa28.46■■■□□ 2.15
TRIM13-206ENST00000457662 CCNB3Q8WWL7 1395 aa28.43■■■□□ 2.14
TRIM13-206ENST00000457662 COL17A1Q9UMD9 1497 aaPredicted RBP28.42■■■□□ 2.14
TRIM13-206ENST00000457662 AKNAQ7Z591 1439 aa28.42■■■□□ 2.14
TRIM13-206ENST00000457662 CFAP74Q9C0B2 1584 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms