RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 FBLN2P98095 1184 aa19.9■□□□□ 0.78
TOP3B-213ENST00000457179 ANP32EQ9BTT0 268 aa19.88■□□□□ 0.77
TOP3B-213ENST00000457179 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
TOP3B-213ENST00000457179 FAM50AQ14320 339 aaKnown RBP19.84■□□□□ 0.77
TOP3B-213ENST00000457179 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
TOP3B-213ENST00000457179 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
TOP3B-213ENST00000457179 FHOD3Q2V2M9 1422 aa19.78■□□□□ 0.76
TOP3B-213ENST00000457179 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.764e-7■■■■■ 29.7
TOP3B-213ENST00000457179 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
TOP3B-213ENST00000457179 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
TOP3B-213ENST00000457179 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
TOP3B-213ENST00000457179 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
TOP3B-213ENST00000457179 ERCC6Q03468 1493 aa19.72■□□□□ 0.75
TOP3B-213ENST00000457179 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
TOP3B-213ENST00000457179 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
TOP3B-213ENST00000457179 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
TOP3B-213ENST00000457179 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
TOP3B-213ENST00000457179 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-213ENST00000457179 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
TOP3B-213ENST00000457179 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
TOP3B-213ENST00000457179 BCANQ96GW7 911 aa19.53■□□□□ 0.72
TOP3B-213ENST00000457179 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
TOP3B-213ENST00000457179 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
TOP3B-213ENST00000457179 MRC2Q9UBG0 1479 aa19.52■□□□□ 0.71
TOP3B-213ENST00000457179 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
TOP3B-213ENST00000457179 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
TOP3B-213ENST00000457179 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
TOP3B-213ENST00000457179 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
TOP3B-213ENST00000457179 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
TOP3B-213ENST00000457179 PCF11O94913 1555 aaKnown RBP19.41■□□□□ 0.7
TOP3B-213ENST00000457179 PRKCSHP14314 528 aaPredicted RBP19.4■□□□□ 0.7
TOP3B-213ENST00000457179 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
TOP3B-213ENST00000457179 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
TOP3B-213ENST00000457179 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
TOP3B-213ENST00000457179 RRP7BPQ9NSQ0 103 aa19.38■□□□□ 0.69
TOP3B-213ENST00000457179 RAB3GAP2Q9H2M9 1393 aa19.37■□□□□ 0.69
TOP3B-213ENST00000457179 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
TOP3B-213ENST00000457179 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
TOP3B-213ENST00000457179 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
TOP3B-213ENST00000457179 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
TOP3B-213ENST00000457179 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
TOP3B-213ENST00000457179 CUL7Q14999 1698 aa19.35■□□□□ 0.69
TOP3B-213ENST00000457179 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TOP3B-213ENST00000457179 CASKIN1Q8WXD9 1431 aa19.32■□□□□ 0.68
TOP3B-213ENST00000457179 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
TOP3B-213ENST00000457179 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
TOP3B-213ENST00000457179 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
TOP3B-213ENST00000457179 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
TOP3B-213ENST00000457179 FKBP8Q14318 412 aa19.27■□□□□ 0.68
TOP3B-213ENST00000457179 RBM19Q9Y4C8 960 aaKnown RBP19.26■□□□□ 0.67
TOP3B-213ENST00000457179 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
TOP3B-213ENST00000457179 FYCO1Q9BQS8 1478 aa19.25■□□□□ 0.67
TOP3B-213ENST00000457179 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
TOP3B-213ENST00000457179 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
TOP3B-213ENST00000457179 SETD5Q9C0A6 1442 aa19.22■□□□□ 0.67
TOP3B-213ENST00000457179 CTTNBP2Q8WZ74 1663 aa19.22■□□□□ 0.67
TOP3B-213ENST00000457179 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
TOP3B-213ENST00000457179 CDK13Q14004 1512 aaKnown RBP19.22■□□□□ 0.67
TOP3B-213ENST00000457179 WDR62O43379 1518 aa19.19■□□□□ 0.66
TOP3B-213ENST00000457179 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
TOP3B-213ENST00000457179 FGD6Q6ZV73 1430 aa19.18■□□□□ 0.66
TOP3B-213ENST00000457179 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
TOP3B-213ENST00000457179 FOXD1Q16676 465 aa19.17■□□□□ 0.66
TOP3B-213ENST00000457179 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
TOP3B-213ENST00000457179 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
TOP3B-213ENST00000457179 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
TOP3B-213ENST00000457179 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TOP3B-213ENST00000457179 CDK11AQ9UQ88 783 aaPredicted RBP19.15■□□□□ 0.66
TOP3B-213ENST00000457179 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
TOP3B-213ENST00000457179 MSH5O43196 834 aa19.11■□□□□ 0.65
TOP3B-213ENST00000457179 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
TOP3B-213ENST00000457179 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
TOP3B-213ENST00000457179 PLB1Q6P1J6 1458 aa19.1■□□□□ 0.65
TOP3B-213ENST00000457179 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
TOP3B-213ENST00000457179 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
TOP3B-213ENST00000457179 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
TOP3B-213ENST00000457179 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
TOP3B-213ENST00000457179 NEFLP07196 543 aa19.09■□□□□ 0.65
TOP3B-213ENST00000457179 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.65
TOP3B-213ENST00000457179 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
TOP3B-213ENST00000457179 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
TOP3B-213ENST00000457179 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
TOP3B-213ENST00000457179 PLEKHD1A6NEE1 506 aa19.06■□□□□ 0.64
TOP3B-213ENST00000457179 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
TOP3B-213ENST00000457179 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
TOP3B-213ENST00000457179 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
TOP3B-213ENST00000457179 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
TOP3B-213ENST00000457179 CFAP43Q8NDM7 1665 aa19.03■□□□□ 0.64
TOP3B-213ENST00000457179 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
TOP3B-213ENST00000457179 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
TOP3B-213ENST00000457179 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
TOP3B-213ENST00000457179 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
TOP3B-213ENST00000457179 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
TOP3B-213ENST00000457179 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
TOP3B-213ENST00000457179 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
TOP3B-213ENST00000457179 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
TOP3B-213ENST00000457179 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
TOP3B-213ENST00000457179 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
TOP3B-213ENST00000457179 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■■■■ 28.8
TOP3B-213ENST00000457179 PTPRGP23470 1445 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms