RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 FBLN2P98095 1184 aa19.9■□□□□ 0.78
TOP3B-213ENST00000457179 ANP32EQ9BTT0 268 aa19.88■□□□□ 0.77
TOP3B-213ENST00000457179 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
TOP3B-213ENST00000457179 FAM50AQ14320 339 aaKnown RBP19.84■□□□□ 0.77
TOP3B-213ENST00000457179 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
TOP3B-213ENST00000457179 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
TOP3B-213ENST00000457179 FHOD3Q2V2M9 1422 aa19.78■□□□□ 0.76
TOP3B-213ENST00000457179 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.764e-7■■■■■ 29.7
TOP3B-213ENST00000457179 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
TOP3B-213ENST00000457179 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
TOP3B-213ENST00000457179 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
TOP3B-213ENST00000457179 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
TOP3B-213ENST00000457179 ERCC6Q03468 1493 aa19.72■□□□□ 0.75
TOP3B-213ENST00000457179 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
TOP3B-213ENST00000457179 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
TOP3B-213ENST00000457179 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
TOP3B-213ENST00000457179 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
TOP3B-213ENST00000457179 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-213ENST00000457179 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
TOP3B-213ENST00000457179 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
TOP3B-213ENST00000457179 BCANQ96GW7 911 aa19.53■□□□□ 0.72
TOP3B-213ENST00000457179 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
TOP3B-213ENST00000457179 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
TOP3B-213ENST00000457179 MRC2Q9UBG0 1479 aa19.52■□□□□ 0.71
TOP3B-213ENST00000457179 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
TOP3B-213ENST00000457179 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
TOP3B-213ENST00000457179 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
TOP3B-213ENST00000457179 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
TOP3B-213ENST00000457179 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
TOP3B-213ENST00000457179 PCF11O94913 1555 aaKnown RBP19.41■□□□□ 0.7
TOP3B-213ENST00000457179 PRKCSHP14314 528 aaPredicted RBP19.4■□□□□ 0.7
TOP3B-213ENST00000457179 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
TOP3B-213ENST00000457179 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
TOP3B-213ENST00000457179 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
TOP3B-213ENST00000457179 RRP7BPQ9NSQ0 103 aa19.38■□□□□ 0.69
TOP3B-213ENST00000457179 RAB3GAP2Q9H2M9 1393 aa19.37■□□□□ 0.69
TOP3B-213ENST00000457179 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
TOP3B-213ENST00000457179 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
TOP3B-213ENST00000457179 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
TOP3B-213ENST00000457179 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
TOP3B-213ENST00000457179 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
TOP3B-213ENST00000457179 CUL7Q14999 1698 aa19.35■□□□□ 0.69
TOP3B-213ENST00000457179 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TOP3B-213ENST00000457179 CASKIN1Q8WXD9 1431 aa19.32■□□□□ 0.68
TOP3B-213ENST00000457179 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
TOP3B-213ENST00000457179 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
TOP3B-213ENST00000457179 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
TOP3B-213ENST00000457179 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
TOP3B-213ENST00000457179 FKBP8Q14318 412 aa19.27■□□□□ 0.68
TOP3B-213ENST00000457179 RBM19Q9Y4C8 960 aaKnown RBP19.26■□□□□ 0.67
TOP3B-213ENST00000457179 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
TOP3B-213ENST00000457179 FYCO1Q9BQS8 1478 aa19.25■□□□□ 0.67
TOP3B-213ENST00000457179 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
TOP3B-213ENST00000457179 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
TOP3B-213ENST00000457179 SETD5Q9C0A6 1442 aa19.22■□□□□ 0.67
TOP3B-213ENST00000457179 CTTNBP2Q8WZ74 1663 aa19.22■□□□□ 0.67
TOP3B-213ENST00000457179 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
TOP3B-213ENST00000457179 CDK13Q14004 1512 aaKnown RBP19.22■□□□□ 0.67
TOP3B-213ENST00000457179 WDR62O43379 1518 aa19.19■□□□□ 0.66
TOP3B-213ENST00000457179 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
TOP3B-213ENST00000457179 FGD6Q6ZV73 1430 aa19.18■□□□□ 0.66
TOP3B-213ENST00000457179 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
TOP3B-213ENST00000457179 FOXD1Q16676 465 aa19.17■□□□□ 0.66
TOP3B-213ENST00000457179 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
TOP3B-213ENST00000457179 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
TOP3B-213ENST00000457179 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
TOP3B-213ENST00000457179 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TOP3B-213ENST00000457179 CDK11AQ9UQ88 783 aaPredicted RBP19.15■□□□□ 0.66
TOP3B-213ENST00000457179 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
TOP3B-213ENST00000457179 MSH5O43196 834 aa19.11■□□□□ 0.65
TOP3B-213ENST00000457179 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
TOP3B-213ENST00000457179 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
TOP3B-213ENST00000457179 PLB1Q6P1J6 1458 aa19.1■□□□□ 0.65
TOP3B-213ENST00000457179 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
TOP3B-213ENST00000457179 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
TOP3B-213ENST00000457179 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
TOP3B-213ENST00000457179 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
TOP3B-213ENST00000457179 NEFLP07196 543 aa19.09■□□□□ 0.65
TOP3B-213ENST00000457179 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.65
TOP3B-213ENST00000457179 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
TOP3B-213ENST00000457179 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
TOP3B-213ENST00000457179 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
TOP3B-213ENST00000457179 PLEKHD1A6NEE1 506 aa19.06■□□□□ 0.64
TOP3B-213ENST00000457179 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
TOP3B-213ENST00000457179 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
TOP3B-213ENST00000457179 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
TOP3B-213ENST00000457179 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
TOP3B-213ENST00000457179 CFAP43Q8NDM7 1665 aa19.03■□□□□ 0.64
TOP3B-213ENST00000457179 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
TOP3B-213ENST00000457179 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
TOP3B-213ENST00000457179 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
TOP3B-213ENST00000457179 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
TOP3B-213ENST00000457179 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
TOP3B-213ENST00000457179 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
TOP3B-213ENST00000457179 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
TOP3B-213ENST00000457179 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
TOP3B-213ENST00000457179 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
TOP3B-213ENST00000457179 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
TOP3B-213ENST00000457179 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■■■■ 28.8
TOP3B-213ENST00000457179 PTPRGP23470 1445 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms