RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
TIMP1-205ENST00000456754 KIAA0586Q9BVV6 1533 aa23.25■■□□□ 1.31
TIMP1-205ENST00000456754 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
TIMP1-205ENST00000456754 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
TIMP1-205ENST00000456754 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
TIMP1-205ENST00000456754 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
TIMP1-205ENST00000456754 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
TIMP1-205ENST00000456754 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
TIMP1-205ENST00000456754 IQGAP2Q13576 1575 aa23.2■■□□□ 1.3
TIMP1-205ENST00000456754 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
TIMP1-205ENST00000456754 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
TIMP1-205ENST00000456754 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
TIMP1-205ENST00000456754 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
TIMP1-205ENST00000456754 UBTFP17480 764 aaKnown RBP23.09■■□□□ 1.29
TIMP1-205ENST00000456754 RANGAP1P46060 587 aaPredicted RBP23.08■■□□□ 1.29
TIMP1-205ENST00000456754 UGGT2Q9NYU1 1516 aa23.08■■□□□ 1.28
TIMP1-205ENST00000456754 DISP1Q96F81 1524 aa23.06■■□□□ 1.28
TIMP1-205ENST00000456754 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
TIMP1-205ENST00000456754 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
TIMP1-205ENST00000456754 KIAA0556O60303 1618 aa23■■□□□ 1.27
TIMP1-205ENST00000456754 TTBK1Q5TCY1 1321 aaPredicted RBP23■■□□□ 1.27
TIMP1-205ENST00000456754 P3H3Q8IVL6 736 aa22.97■■□□□ 1.27
TIMP1-205ENST00000456754 SAMD9Q5K651 1589 aa22.95■■□□□ 1.26
TIMP1-205ENST00000456754 CARMIL2Q6F5E8 1435 aa22.94■■□□□ 1.26
TIMP1-205ENST00000456754 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
TIMP1-205ENST00000456754 PTPRGP23470 1445 aa22.87■■□□□ 1.25
TIMP1-205ENST00000456754 FHOD3Q2V2M9 1422 aa22.87■■□□□ 1.25
TIMP1-205ENST00000456754 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
TIMP1-205ENST00000456754 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
TIMP1-205ENST00000456754 ADCY10Q96PN6 1610 aa22.81■■□□□ 1.24
TIMP1-205ENST00000456754 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
TIMP1-205ENST00000456754 CLIP1P30622 1438 aa22.77■■□□□ 1.24
TIMP1-205ENST00000456754 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
TIMP1-205ENST00000456754 ABCA8O94911 1581 aa22.74■■□□□ 1.23
TIMP1-205ENST00000456754 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
TIMP1-205ENST00000456754 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
TIMP1-205ENST00000456754 ARID3CA6NKF2 412 aa22.68■■□□□ 1.22
TIMP1-205ENST00000456754 RAPGEF6Q8TEU7 1601 aa22.67■■□□□ 1.22
TIMP1-205ENST00000456754 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
TIMP1-205ENST00000456754 ZCCHC11Q5TAX3 1644 aaKnown RBP22.62■■□□□ 1.21
TIMP1-205ENST00000456754 NUP153P49790 1475 aaKnown RBP22.6■■□□□ 1.21
TIMP1-205ENST00000456754 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
TIMP1-205ENST00000456754 FMN1Q68DA7 1419 aa22.58■■□□□ 1.21
TIMP1-205ENST00000456754 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.21
TIMP1-205ENST00000456754 LRRIQ1Q96JM4 1722 aa22.57■■□□□ 1.2
TIMP1-205ENST00000456754 ATP10BO94823 1461 aa22.55■■□□□ 1.2
TIMP1-205ENST00000456754 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
TIMP1-205ENST00000456754 NPM1P06748 294 aaKnown RBP eCLIP22.54■■□□□ 1.2
TIMP1-205ENST00000456754 CDK13Q14004 1512 aaKnown RBP22.53■■□□□ 1.2
TIMP1-205ENST00000456754 MAPKBP1O60336 1514 aa22.52■■□□□ 1.19
TIMP1-205ENST00000456754 HECW1Q76N89 1606 aa22.51■■□□□ 1.19
TIMP1-205ENST00000456754 ASXL2Q76L83 1435 aa22.49■■□□□ 1.19
TIMP1-205ENST00000456754 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
TIMP1-205ENST00000456754 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
TIMP1-205ENST00000456754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
TIMP1-205ENST00000456754 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
TIMP1-205ENST00000456754 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
TIMP1-205ENST00000456754 KIF13AQ9H1H9 1805 aa22.43■■□□□ 1.18
TIMP1-205ENST00000456754 VPS8Q8N3P4 1428 aa22.43■■□□□ 1.18
TIMP1-205ENST00000456754 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
TIMP1-205ENST00000456754 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
TIMP1-205ENST00000456754 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
TIMP1-205ENST00000456754 ABCC10Q5T3U5 1492 aa22.39■■□□□ 1.17
TIMP1-205ENST00000456754 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
TIMP1-205ENST00000456754 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
TIMP1-205ENST00000456754 FAM69CQ0P6D2 419 aa22.35■■□□□ 1.17
TIMP1-205ENST00000456754 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
TIMP1-205ENST00000456754 TSPOAP1O95153 1857 aa22.29■■□□□ 1.16
TIMP1-205ENST00000456754 PLEKHD1A6NEE1 506 aa22.29■■□□□ 1.16
TIMP1-205ENST00000456754 CFAP43Q8NDM7 1665 aa22.29■■□□□ 1.16
TIMP1-205ENST00000456754 KIF14Q15058 1648 aa22.28■■□□□ 1.16
TIMP1-205ENST00000456754 GLI2P10070 1586 aa22.28■■□□□ 1.16
TIMP1-205ENST00000456754 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
TIMP1-205ENST00000456754 MAP3K4Q9Y6R4 1608 aa22.24■■□□□ 1.15
TIMP1-205ENST00000456754 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
TIMP1-205ENST00000456754 PPRC1Q5VV67 1664 aaKnown RBP22.23■■□□□ 1.15
TIMP1-205ENST00000456754 TTC37Q6PGP7 1564 aa22.23■■□□□ 1.15
TIMP1-205ENST00000456754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.152e-13■□□□□ 11.1
TIMP1-205ENST00000456754 ABCA9Q8IUA7 1624 aa22.21■■□□□ 1.15
TIMP1-205ENST00000456754 KANK4Q5T7N3 995 aaPredicted RBP22.2■■□□□ 1.14
TIMP1-205ENST00000456754 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
TIMP1-205ENST00000456754 CD109Q6YHK3 1445 aa22.16■■□□□ 1.14
TIMP1-205ENST00000456754 MTUS2Q5JR59 1369 aa22.16■■□□□ 1.14
TIMP1-205ENST00000456754 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
TIMP1-205ENST00000456754 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
TIMP1-205ENST00000456754 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
TIMP1-205ENST00000456754 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
TIMP1-205ENST00000456754 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
TIMP1-205ENST00000456754 APLP2Q06481 763 aa22.08■■□□□ 1.13
TIMP1-205ENST00000456754 CDC42BPAQ5VT25 1732 aa22.08■■□□□ 1.12
TIMP1-205ENST00000456754 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
TIMP1-205ENST00000456754 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
TIMP1-205ENST00000456754 CDC42BPBQ9Y5S2 1711 aa22.06■■□□□ 1.12
TIMP1-205ENST00000456754 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
TIMP1-205ENST00000456754 PLCH2O75038 1416 aa22.03■■□□□ 1.12
TIMP1-205ENST00000456754 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
TIMP1-205ENST00000456754 TEX14Q8IWB6 1497 aa22.01■■□□□ 1.11
TIMP1-205ENST00000456754 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
TIMP1-205ENST00000456754 ARHGAP5Q13017 1502 aa22■■□□□ 1.11
TIMP1-205ENST00000456754 FANCAO15360 1455 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms