RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
CASC4P1-201ENST00000456608 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
CASC4P1-201ENST00000456608 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
CASC4P1-201ENST00000456608 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
CASC4P1-201ENST00000456608 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.89
CASC4P1-201ENST00000456608 EFCAB5A4FU69 1503 aa20.62■□□□□ 0.89
CASC4P1-201ENST00000456608 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
CASC4P1-201ENST00000456608 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
CASC4P1-201ENST00000456608 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
CASC4P1-201ENST00000456608 CHD1O14646 1710 aa20.6■□□□□ 0.89
CASC4P1-201ENST00000456608 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
CASC4P1-201ENST00000456608 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
CASC4P1-201ENST00000456608 KIAA0586Q9BVV6 1533 aa20.58■□□□□ 0.88
CASC4P1-201ENST00000456608 NUP160Q12769 1436 aa20.57■□□□□ 0.88
CASC4P1-201ENST00000456608 UGGT2Q9NYU1 1516 aa20.53■□□□□ 0.88
CASC4P1-201ENST00000456608 FBLN2P98095 1184 aa20.52■□□□□ 0.87
CASC4P1-201ENST00000456608 FHOD3Q2V2M9 1422 aa20.47■□□□□ 0.87
CASC4P1-201ENST00000456608 P3H3Q8IVL6 736 aa20.43■□□□□ 0.86
CASC4P1-201ENST00000456608 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
CASC4P1-201ENST00000456608 DISP1Q96F81 1524 aa20.41■□□□□ 0.86
CASC4P1-201ENST00000456608 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.86
CASC4P1-201ENST00000456608 FMN1Q68DA7 1419 aa20.39■□□□□ 0.85
CASC4P1-201ENST00000456608 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
CASC4P1-201ENST00000456608 FYCO1Q9BQS8 1478 aa20.35■□□□□ 0.85
CASC4P1-201ENST00000456608 CASKIN1Q8WXD9 1431 aa20.34■□□□□ 0.85
CASC4P1-201ENST00000456608 JPH4Q96JJ6 628 aa20.34■□□□□ 0.85
CASC4P1-201ENST00000456608 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
CASC4P1-201ENST00000456608 MAP3K1Q13233 1512 aa20.33■□□□□ 0.85
CASC4P1-201ENST00000456608 APLP2Q06481 763 aa20.32■□□□□ 0.84
CASC4P1-201ENST00000456608 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
CASC4P1-201ENST00000456608 CFAP43Q8NDM7 1665 aa20.32■□□□□ 0.84
CASC4P1-201ENST00000456608 TIAM1Q13009 1591 aa20.3■□□□□ 0.84
CASC4P1-201ENST00000456608 CARMIL2Q6F5E8 1435 aa20.29■□□□□ 0.84
CASC4P1-201ENST00000456608 LRRIQ1Q96JM4 1722 aa20.29■□□□□ 0.84
CASC4P1-201ENST00000456608 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
CASC4P1-201ENST00000456608 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
CASC4P1-201ENST00000456608 PRG4Q92954 1404 aaPredicted RBP20.24■□□□□ 0.83
CASC4P1-201ENST00000456608 RAPGEF6Q8TEU7 1601 aa20.2■□□□□ 0.82
CASC4P1-201ENST00000456608 KANK4Q5T7N3 995 aaPredicted RBP20.2■□□□□ 0.82
CASC4P1-201ENST00000456608 PCGF6Q9BYE7 350 aa20.18■□□□□ 0.82
CASC4P1-201ENST00000456608 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
CASC4P1-201ENST00000456608 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
CASC4P1-201ENST00000456608 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
CASC4P1-201ENST00000456608 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
CASC4P1-201ENST00000456608 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
CASC4P1-201ENST00000456608 ABCA8O94911 1581 aa20.14■□□□□ 0.82
CASC4P1-201ENST00000456608 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
CASC4P1-201ENST00000456608 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
CASC4P1-201ENST00000456608 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
CASC4P1-201ENST00000456608 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
CASC4P1-201ENST00000456608 PTPRGP23470 1445 aa20.1■□□□□ 0.81
CASC4P1-201ENST00000456608 CDK13Q14004 1512 aaKnown RBP20.08■□□□□ 0.81
CASC4P1-201ENST00000456608 EHBP1L1Q8N3D4 1523 aa20.06■□□□□ 0.8
CASC4P1-201ENST00000456608 MAGI3Q5TCQ9 1506 aa20.05■□□□□ 0.8
CASC4P1-201ENST00000456608 MTUS2Q5JR59 1369 aa20.02■□□□□ 0.8
CASC4P1-201ENST00000456608 SUPT6HQ7KZ85 1726 aaKnown RBP20.02■□□□□ 0.8
CASC4P1-201ENST00000456608 UACAQ9BZF9 1416 aa20■□□□□ 0.79
CASC4P1-201ENST00000456608 RRBP1Q9P2E9 1410 aaKnown RBP19.99■□□□□ 0.79
CASC4P1-201ENST00000456608 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
CASC4P1-201ENST00000456608 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
CASC4P1-201ENST00000456608 ATP10BO94823 1461 aa19.96■□□□□ 0.79
CASC4P1-201ENST00000456608 PHLDB1Q86UU1 1377 aa19.96■□□□□ 0.79
CASC4P1-201ENST00000456608 ARID3CA6NKF2 412 aa19.96■□□□□ 0.79
CASC4P1-201ENST00000456608 UHRF1BP1LA0JNW5 1464 aa19.95■□□□□ 0.78
CASC4P1-201ENST00000456608 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
CASC4P1-201ENST00000456608 FOXD1Q16676 465 aa19.93■□□□□ 0.78
CASC4P1-201ENST00000456608 ADCY10Q96PN6 1610 aa19.92■□□□□ 0.78
CASC4P1-201ENST00000456608 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
CASC4P1-201ENST00000456608 TROQ12816 1431 aaPredicted RBP19.91■□□□□ 0.78
CASC4P1-201ENST00000456608 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
CASC4P1-201ENST00000456608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.89■□□□□ 0.77
CASC4P1-201ENST00000456608 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.77
CASC4P1-201ENST00000456608 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
CASC4P1-201ENST00000456608 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
CASC4P1-201ENST00000456608 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
CASC4P1-201ENST00000456608 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
CASC4P1-201ENST00000456608 KIF14Q15058 1648 aa19.84■□□□□ 0.77
CASC4P1-201ENST00000456608 FGD6Q6ZV73 1430 aa19.84■□□□□ 0.77
CASC4P1-201ENST00000456608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.82■□□□□ 0.76
CASC4P1-201ENST00000456608 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
CASC4P1-201ENST00000456608 ITSN2Q9NZM3 1697 aa19.79■□□□□ 0.76
CASC4P1-201ENST00000456608 PTPN23Q9H3S7 1636 aa19.79■□□□□ 0.76
CASC4P1-201ENST00000456608 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
CASC4P1-201ENST00000456608 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
CASC4P1-201ENST00000456608 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
CASC4P1-201ENST00000456608 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
CASC4P1-201ENST00000456608 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
CASC4P1-201ENST00000456608 TCOF1Q13428 1488 aaKnown RBP19.76■□□□□ 0.75
CASC4P1-201ENST00000456608 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
CASC4P1-201ENST00000456608 GPATCH8Q9UKJ3 1502 aaKnown RBP19.73■□□□□ 0.75
CASC4P1-201ENST00000456608 FAM50AQ14320 339 aaKnown RBP19.72■□□□□ 0.75
CASC4P1-201ENST00000456608 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
CASC4P1-201ENST00000456608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
CASC4P1-201ENST00000456608 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
CASC4P1-201ENST00000456608 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
CASC4P1-201ENST00000456608 CDC42BPBQ9Y5S2 1711 aa19.67■□□□□ 0.74
CASC4P1-201ENST00000456608 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
CASC4P1-201ENST00000456608 WDR7Q9Y4E6 1490 aa19.65■□□□□ 0.74
CASC4P1-201ENST00000456608 ITGAEP38570 1179 aa19.63■□□□□ 0.73
CASC4P1-201ENST00000456608 DNMT1P26358 1616 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms