RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
FAM239A-203ENST00000456563 JPH4Q96JJ6 628 aa29.3■■■□□ 2.28
FAM239A-203ENST00000456563 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
FAM239A-203ENST00000456563 IQGAP2Q13576 1575 aa29.26■■■□□ 2.28
FAM239A-203ENST00000456563 CTTNBP2Q8WZ74 1663 aa29.25■■■□□ 2.27
FAM239A-203ENST00000456563 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
FAM239A-203ENST00000456563 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
FAM239A-203ENST00000456563 ARHGEF11O15085 1522 aa29.2■■■□□ 2.26
FAM239A-203ENST00000456563 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
FAM239A-203ENST00000456563 UGGT2Q9NYU1 1516 aa29.15■■■□□ 2.26
FAM239A-203ENST00000456563 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
FAM239A-203ENST00000456563 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
FAM239A-203ENST00000456563 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
FAM239A-203ENST00000456563 ERCC6L2Q5T890 1561 aa29.1■■■□□ 2.25
FAM239A-203ENST00000456563 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
FAM239A-203ENST00000456563 DISP1Q96F81 1524 aa29.05■■■□□ 2.24
FAM239A-203ENST00000456563 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
FAM239A-203ENST00000456563 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
FAM239A-203ENST00000456563 ARAP1Q96P48 1450 aa29■■■□□ 2.23
FAM239A-203ENST00000456563 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
FAM239A-203ENST00000456563 SAMD9Q5K651 1589 aa28.94■■■□□ 2.22
FAM239A-203ENST00000456563 RANGAP1P46060 587 aaPredicted RBP28.94■■■□□ 2.22
FAM239A-203ENST00000456563 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
FAM239A-203ENST00000456563 EFCAB5A4FU69 1503 aa28.91■■■□□ 2.22
FAM239A-203ENST00000456563 PTPRGP23470 1445 aa28.89■■■□□ 2.22
FAM239A-203ENST00000456563 P3H3Q8IVL6 736 aa28.86■■■□□ 2.21
FAM239A-203ENST00000456563 ARHGAP35Q9NRY4 1499 aa28.84■■■□□ 2.21
FAM239A-203ENST00000456563 CLIP1P30622 1438 aa28.8■■■□□ 2.2
FAM239A-203ENST00000456563 FHOD3Q2V2M9 1422 aa28.79■■■□□ 2.2
FAM239A-203ENST00000456563 TTBK1Q5TCY1 1321 aaPredicted RBP28.79■■■□□ 2.2
FAM239A-203ENST00000456563 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
FAM239A-203ENST00000456563 UACAQ9BZF9 1416 aa28.71■■■□□ 2.19
FAM239A-203ENST00000456563 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
FAM239A-203ENST00000456563 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
FAM239A-203ENST00000456563 ABCA8O94911 1581 aa28.66■■■□□ 2.18
FAM239A-203ENST00000456563 FMN1Q68DA7 1419 aa28.65■■■□□ 2.18
FAM239A-203ENST00000456563 ADCY10Q96PN6 1610 aa28.64■■■□□ 2.18
FAM239A-203ENST00000456563 ABCC2Q92887 1545 aa28.64■■■□□ 2.17
FAM239A-203ENST00000456563 RAPGEF6Q8TEU7 1601 aa28.56■■■□□ 2.16
FAM239A-203ENST00000456563 NPM1P06748 294 aaKnown RBP eCLIP28.55■■■□□ 2.16
FAM239A-203ENST00000456563 KDM5BQ9UGL1 1544 aa28.53■■■□□ 2.16
FAM239A-203ENST00000456563 NUP153P49790 1475 aaKnown RBP28.49■■■□□ 2.15
FAM239A-203ENST00000456563 CASKIN1Q8WXD9 1431 aa28.47■■■□□ 2.15
FAM239A-203ENST00000456563 ATP10BO94823 1461 aa28.44■■■□□ 2.14
FAM239A-203ENST00000456563 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
FAM239A-203ENST00000456563 PCF11O94913 1555 aaKnown RBP28.42■■■□□ 2.14
FAM239A-203ENST00000456563 ZCCHC11Q5TAX3 1644 aaKnown RBP28.42■■■□□ 2.14
FAM239A-203ENST00000456563 VPS8Q8N3P4 1428 aa28.42■■■□□ 2.14
FAM239A-203ENST00000456563 FYCO1Q9BQS8 1478 aa28.41■■■□□ 2.14
FAM239A-203ENST00000456563 MAPKBP1O60336 1514 aa28.4■■■□□ 2.14
FAM239A-203ENST00000456563 ATP1B4Q9UN42 357 aaPredicted RBP28.4■■■□□ 2.14
FAM239A-203ENST00000456563 ARID3CA6NKF2 412 aa28.39■■■□□ 2.14
FAM239A-203ENST00000456563 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
FAM239A-203ENST00000456563 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
FAM239A-203ENST00000456563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
FAM239A-203ENST00000456563 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
FAM239A-203ENST00000456563 CDK13Q14004 1512 aaKnown RBP28.31■■■□□ 2.12
FAM239A-203ENST00000456563 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
FAM239A-203ENST00000456563 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
FAM239A-203ENST00000456563 LRRIQ1Q96JM4 1722 aa28.26■■■□□ 2.12
FAM239A-203ENST00000456563 PLEKHD1A6NEE1 506 aa28.25■■■□□ 2.11
FAM239A-203ENST00000456563 ABCC10Q5T3U5 1492 aa28.23■■■□□ 2.11
FAM239A-203ENST00000456563 CDK11AQ9UQ88 783 aaPredicted RBP28.23■■■□□ 2.11
FAM239A-203ENST00000456563 TRHP20396 242 aaPredicted RBP28.17■■■□□ 2.1
FAM239A-203ENST00000456563 DIP2BQ9P265 1576 aa28.16■■■□□ 2.1
FAM239A-203ENST00000456563 FAM69CQ0P6D2 419 aa28.15■■■□□ 2.1
FAM239A-203ENST00000456563 KCNH8Q96L42 1107 aa28.14■■■□□ 2.1
FAM239A-203ENST00000456563 MAP3K1Q13233 1512 aa28.13■■■□□ 2.09
FAM239A-203ENST00000456563 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
FAM239A-203ENST00000456563 GLI2P10070 1586 aa28.12■■■□□ 2.09
FAM239A-203ENST00000456563 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
FAM239A-203ENST00000456563 MAGI3Q5TCQ9 1506 aa28.09■■■□□ 2.09
FAM239A-203ENST00000456563 CFAP43Q8NDM7 1665 aa28.09■■■□□ 2.09
FAM239A-203ENST00000456563 KIF13AQ9H1H9 1805 aa28.08■■■□□ 2.09
FAM239A-203ENST00000456563 APLP2Q06481 763 aa28.08■■■□□ 2.09
FAM239A-203ENST00000456563 MTUS2Q5JR59 1369 aa28.05■■■□□ 2.08
FAM239A-203ENST00000456563 ABCA9Q8IUA7 1624 aa28.01■■■□□ 2.07
FAM239A-203ENST00000456563 EHBP1L1Q8N3D4 1523 aa28.01■■■□□ 2.07
FAM239A-203ENST00000456563 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
FAM239A-203ENST00000456563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.99■■■□□ 2.07
FAM239A-203ENST00000456563 KIF14Q15058 1648 aa27.99■■■□□ 2.07
FAM239A-203ENST00000456563 KANK4Q5T7N3 995 aaPredicted RBP27.98■■■□□ 2.07
FAM239A-203ENST00000456563 MAP3K4Q9Y6R4 1608 aa27.98■■■□□ 2.07
FAM239A-203ENST00000456563 CD109Q6YHK3 1445 aa27.97■■■□□ 2.07
FAM239A-203ENST00000456563 TTC37Q6PGP7 1564 aa27.92■■■□□ 2.06
FAM239A-203ENST00000456563 PLCH2O75038 1416 aa27.86■■■□□ 2.05
FAM239A-203ENST00000456563 PPRC1Q5VV67 1664 aaKnown RBP27.85■■■□□ 2.05
FAM239A-203ENST00000456563 TEX14Q8IWB6 1497 aa27.85■■■□□ 2.05
FAM239A-203ENST00000456563 SUPT6HQ7KZ85 1726 aaKnown RBP27.85■■■□□ 2.05
FAM239A-203ENST00000456563 NCOA2Q15596 1464 aa27.84■■■□□ 2.05
FAM239A-203ENST00000456563 TSPOAP1O95153 1857 aa27.84■■■□□ 2.05
FAM239A-203ENST00000456563 ARAP3Q8WWN8 1544 aa27.82■■■□□ 2.04
FAM239A-203ENST00000456563 CCNB3Q8WWL7 1395 aa27.81■■■□□ 2.04
FAM239A-203ENST00000456563 GPATCH8Q9UKJ3 1502 aaKnown RBP27.8■■■□□ 2.04
FAM239A-203ENST00000456563 MYO5CQ9NQX4 1742 aa27.8■■■□□ 2.04
FAM239A-203ENST00000456563 EFCAB2Q5VUJ9 269 aa27.76■■■□□ 2.03
FAM239A-203ENST00000456563 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
FAM239A-203ENST00000456563 FANCAO15360 1455 aa27.76■■■□□ 2.03
FAM239A-203ENST00000456563 NEO1Q92859 1461 aa27.76■■■□□ 2.03
FAM239A-203ENST00000456563 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms