RNA–Protein interactions for RNA: ENST00000456026.1

LINC01653-201, Transcript of long intergenic non-protein coding RNA 1653, humanhuman

TSL 1 (best) BASIC

Gene LINC01653, Length 1,728 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01653-201ENST00000456026 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
LINC01653-201ENST00000456026 ARHGAP35Q9NRY4 1499 aa11.9□□□□□ -0.5
LINC01653-201ENST00000456026 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
LINC01653-201ENST00000456026 CUL7Q14999 1698 aa11.89□□□□□ -0.51
LINC01653-201ENST00000456026 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
LINC01653-201ENST00000456026 CTTNBP2Q8WZ74 1663 aa11.85□□□□□ -0.51
LINC01653-201ENST00000456026 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
LINC01653-201ENST00000456026 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
LINC01653-201ENST00000456026 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
LINC01653-201ENST00000456026 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
LINC01653-201ENST00000456026 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
LINC01653-201ENST00000456026 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
LINC01653-201ENST00000456026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.78□□□□□ -0.52
LINC01653-201ENST00000456026 ZEB1P37275 1124 aaPredicted RBP11.78□□□□□ -0.52
LINC01653-201ENST00000456026 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.52
LINC01653-201ENST00000456026 WDR62O43379 1518 aa11.77□□□□□ -0.52
LINC01653-201ENST00000456026 POTEHQ6S545 545 aa11.77□□□□□ -0.53
LINC01653-201ENST00000456026 APLP2Q06481 763 aa11.75□□□□□ -0.53
LINC01653-201ENST00000456026 PCF11O94913 1555 aaKnown RBP11.74□□□□□ -0.53
LINC01653-201ENST00000456026 TIAM1Q13009 1591 aa11.74□□□□□ -0.53
LINC01653-201ENST00000456026 EFCAB5A4FU69 1503 aa11.74□□□□□ -0.53
LINC01653-201ENST00000456026 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
LINC01653-201ENST00000456026 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
LINC01653-201ENST00000456026 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC01653-201ENST00000456026 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
LINC01653-201ENST00000456026 SAMD9Q5K651 1589 aa11.73□□□□□ -0.53
LINC01653-201ENST00000456026 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
LINC01653-201ENST00000456026 ADAMTS12P58397 1594 aa11.72□□□□□ -0.53
LINC01653-201ENST00000456026 LRRIQ1Q96JM4 1722 aa11.71□□□□□ -0.54
LINC01653-201ENST00000456026 FHOD3Q2V2M9 1422 aa11.71□□□□□ -0.54
LINC01653-201ENST00000456026 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
LINC01653-201ENST00000456026 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
LINC01653-201ENST00000456026 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
LINC01653-201ENST00000456026 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
LINC01653-201ENST00000456026 RRBP1Q9P2E9 1410 aaKnown RBP11.68□□□□□ -0.54
LINC01653-201ENST00000456026 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
LINC01653-201ENST00000456026 FHAD1B1AJZ9 1412 aa11.67□□□□□ -0.54
LINC01653-201ENST00000456026 EIF4G3O43432 1585 aaKnown RBP11.66□□□□□ -0.54
LINC01653-201ENST00000456026 GRIN2BQ13224 1484 aa11.66□□□□□ -0.54
LINC01653-201ENST00000456026 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
LINC01653-201ENST00000456026 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
LINC01653-201ENST00000456026 FYCO1Q9BQS8 1478 aa11.65□□□□□ -0.54
LINC01653-201ENST00000456026 CASKIN1Q8WXD9 1431 aa11.65□□□□□ -0.54
LINC01653-201ENST00000456026 ERCC6Q03468 1493 aa11.65□□□□□ -0.54
LINC01653-201ENST00000456026 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
LINC01653-201ENST00000456026 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
LINC01653-201ENST00000456026 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
LINC01653-201ENST00000456026 CCNB3Q8WWL7 1395 aa11.59□□□□□ -0.55
LINC01653-201ENST00000456026 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
LINC01653-201ENST00000456026 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
LINC01653-201ENST00000456026 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
LINC01653-201ENST00000456026 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
LINC01653-201ENST00000456026 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
LINC01653-201ENST00000456026 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
LINC01653-201ENST00000456026 MAGI3Q5TCQ9 1506 aa11.53□□□□□ -0.56
LINC01653-201ENST00000456026 KIAA0586Q9BVV6 1533 aa11.53□□□□□ -0.56
LINC01653-201ENST00000456026 CEP170Q5SW79 1584 aa11.52□□□□□ -0.56
LINC01653-201ENST00000456026 DISP1Q96F81 1524 aa11.52□□□□□ -0.57
LINC01653-201ENST00000456026 KIAA0556O60303 1618 aa11.52□□□□□ -0.57
LINC01653-201ENST00000456026 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
LINC01653-201ENST00000456026 SYNJ2O15056 1496 aa11.5□□□□□ -0.57
LINC01653-201ENST00000456026 HECW1Q76N89 1606 aa11.5□□□□□ -0.57
LINC01653-201ENST00000456026 SUPT6HQ7KZ85 1726 aaKnown RBP11.49□□□□□ -0.57
LINC01653-201ENST00000456026 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
LINC01653-201ENST00000456026 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
LINC01653-201ENST00000456026 ITGAEP38570 1179 aa11.46□□□□□ -0.57
LINC01653-201ENST00000456026 EPRSP07814 1512 aaKnown RBP11.46□□□□□ -0.57
LINC01653-201ENST00000456026 NCOA2Q15596 1464 aa11.46□□□□□ -0.57
LINC01653-201ENST00000456026 CCDC18Q5T9S5 1454 aa11.46□□□□□ -0.57
LINC01653-201ENST00000456026 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.57
LINC01653-201ENST00000456026 CDK13Q14004 1512 aaKnown RBP11.46□□□□□ -0.58
LINC01653-201ENST00000456026 NUP160Q12769 1436 aa11.45□□□□□ -0.58
LINC01653-201ENST00000456026 MTUS2Q5JR59 1369 aa11.45□□□□□ -0.58
LINC01653-201ENST00000456026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC01653-201ENST00000456026 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
LINC01653-201ENST00000456026 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
LINC01653-201ENST00000456026 RAPGEF6Q8TEU7 1601 aa11.44□□□□□ -0.58
LINC01653-201ENST00000456026 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
LINC01653-201ENST00000456026 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
LINC01653-201ENST00000456026 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
LINC01653-201ENST00000456026 CHMP7Q8WUX9 453 aaPredicted RBP11.42□□□□□ -0.58
LINC01653-201ENST00000456026 CHD1O14646 1710 aa11.42□□□□□ -0.58
LINC01653-201ENST00000456026 CLSPNQ9HAW4 1339 aa11.42□□□□□ -0.58
LINC01653-201ENST00000456026 MAPKBP1O60336 1514 aa11.41□□□□□ -0.58
LINC01653-201ENST00000456026 PTPN23Q9H3S7 1636 aa11.41□□□□□ -0.58
LINC01653-201ENST00000456026 NUP153P49790 1475 aaKnown RBP11.41□□□□□ -0.58
LINC01653-201ENST00000456026 PTPRKQ15262 1439 aa11.41□□□□□ -0.58
LINC01653-201ENST00000456026 FBLN2P98095 1184 aa11.38□□□□□ -0.59
LINC01653-201ENST00000456026 TCOF1Q13428 1488 aaKnown RBP11.37□□□□□ -0.59
LINC01653-201ENST00000456026 ZBTB22O15209 634 aa11.36□□□□□ -0.59
LINC01653-201ENST00000456026 PLB1Q6P1J6 1458 aa11.35□□□□□ -0.59
LINC01653-201ENST00000456026 ARID3CA6NKF2 412 aa11.35□□□□□ -0.59
LINC01653-201ENST00000456026 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
LINC01653-201ENST00000456026 ABCA8O94911 1581 aa11.34□□□□□ -0.59
LINC01653-201ENST00000456026 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
LINC01653-201ENST00000456026 ADCY10Q96PN6 1610 aa11.33□□□□□ -0.6
LINC01653-201ENST00000456026 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
LINC01653-201ENST00000456026 HFM1A2PYH4 1435 aa11.32□□□□□ -0.6
LINC01653-201ENST00000456026 NAIPQ13075 1403 aa11.32□□□□□ -0.6
LINC01653-201ENST00000456026 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms