RNA–Protein interactions for RNA: ENST00000455399.1

PTCHD1-AS-201, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 3 BASIC

Gene PTCHD1-AS, Length 718 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-201ENST00000455399 KIF21AQ7Z4S6 1674 aa9.43□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 BAZ1BQ9UIG0 1483 aaKnown RBP9.41□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
PTCHD1-AS-201ENST00000455399 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
PTCHD1-AS-201ENST00000455399 BAZ1AQ9NRL2 1556 aaPredicted RBP9.34□□□□□ -0.91
PTCHD1-AS-201ENST00000455399 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 PROM2Q8N271 834 aa9.32□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 FKBP8Q14318 412 aa9.29□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
PTCHD1-AS-201ENST00000455399 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
PTCHD1-AS-201ENST00000455399 FARP1Q9Y4F1 1045 aaPredicted RBP9.27□□□□□ -0.93
PTCHD1-AS-201ENST00000455399 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
PTCHD1-AS-201ENST00000455399 WDR62O43379 1518 aa9.26□□□□□ -0.93
PTCHD1-AS-201ENST00000455399 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
PTCHD1-AS-201ENST00000455399 CEP164Q9UPV0 1460 aa9.21□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 GABBR2O75899 941 aa9.2□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 WIZO95785 1651 aa9.18□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
PTCHD1-AS-201ENST00000455399 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
PTCHD1-AS-201ENST00000455399 ARHGEF11O15085 1522 aa9.09□□□□□ -0.95
PTCHD1-AS-201ENST00000455399 CFTRP13569 1480 aa9.07□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 ZRANB1Q9UGI0 708 aa9.06□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 CYB5RLQ6IPT4 315 aa9.05□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 ZNF579Q8NAF0 562 aaKnown RBP9.05□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 ZNF608Q9ULD9 1512 aaPredicted RBP9.05□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 LHX8Q68G74 356 aa9.04□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 CHD1O14646 1710 aa9.02□□□□□ -0.96
PTCHD1-AS-201ENST00000455399 POTEIP0CG38 1075 aa9.02□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 TOP2AP11388 1531 aaKnown RBP9.01□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 CLCN6P51797 869 aa9.01□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 EIF4G3O43432 1585 aaKnown RBP9□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 MIER1Q8N108 512 aa9□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 ARAP1Q96P48 1450 aa8.98□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 PAK3O75914 559 aaPredicted RBP8.97□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 TOPBP1Q92547 1522 aa8.96□□□□□ -0.97
PTCHD1-AS-201ENST00000455399 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 GALR2O43603 387 aaPredicted RBP8.94□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 PLEKHG5O94827 1062 aa8.94□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 DCBLD2Q96PD2 775 aa8.93□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 AQRO60306 1485 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 DNMBPQ6XZF7 1577 aa8.91□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 RASEFQ8IZ41 740 aa8.9□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
PTCHD1-AS-201ENST00000455399 TARBP1Q13395 1621 aaKnown RBP8.9□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 ABCC8Q09428 1581 aa8.9□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 NUBP1P53384 320 aa8.86□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 ZBTB47Q9UFB7 747 aaPredicted RBP8.86□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 RAD54L2Q9Y4B4 1467 aa8.85□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 SNAPC4Q5SXM2 1469 aa8.84□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 CLASP1Q7Z460 1538 aa8.84□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
PTCHD1-AS-201ENST00000455399 VASPP50552 380 aaPredicted RBP8.83□□□□□ -1
PTCHD1-AS-201ENST00000455399 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
PTCHD1-AS-201ENST00000455399 KIF12Q96FN5 646 aa8.83□□□□□ -1
PTCHD1-AS-201ENST00000455399 SOGA1O94964 1423 aa8.81□□□□□ -1
PTCHD1-AS-201ENST00000455399 GAPVD1Q14C86 1478 aa8.78□□□□□ -1
PTCHD1-AS-201ENST00000455399 FGD5Q6ZNL6 1462 aa8.78□□□□□ -1
PTCHD1-AS-201ENST00000455399 PBRM1Q86U86 1689 aa8.78□□□□□ -1
PTCHD1-AS-201ENST00000455399 MAGI1Q96QZ7 1491 aaPredicted RBP8.77□□□□□ -1
PTCHD1-AS-201ENST00000455399 MAP3K13O43283 966 aa8.77□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 ASTLQ6HA08 431 aaPredicted RBP8.77□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 PELP1Q8IZL8 1130 aaKnown RBP8.77□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 GRIN2BQ13224 1484 aa8.77□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 WDR97A6NE52 1622 aa8.76□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 ATMINO43313 823 aaPredicted RBP8.75□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 SYNJ2O15056 1496 aa8.75□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 POTEB2H3BUK9 544 aa8.74□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 FAM212AQ96EL1 285 aa8.74□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 ERCC6L2Q5T890 1561 aa8.72□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 CUX1P39880 1505 aa8.71□□□□□ -1.01
PTCHD1-AS-201ENST00000455399 OTUD5Q96G74 571 aa8.71□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 KIF13AQ9H1H9 1805 aa8.7□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 TIE1P35590 1138 aa8.69□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 ATN1P54259 1190 aaPredicted RBP8.69□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 KLHL34Q8N239 644 aa8.69□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 BMP2KQ9NSY1 1161 aaPredicted RBP8.69□□□□□ -1.02
PTCHD1-AS-201ENST00000455399 PCDHB13Q9Y5F0 798 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms