RNA–Protein interactions for RNA: ENST00000455372.2

SLC39A3-202, Transcript of solute carrier family 39 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC39A3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-202ENST00000455372 PDS5BQ9NTI5 1447 aa27.12■■□□□ 1.93
SLC39A3-202ENST00000455372 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
SLC39A3-202ENST00000455372 LRRC9Q6ZRR7 1453 aa27.11■■□□□ 1.93
SLC39A3-202ENST00000455372 CLSPNQ9HAW4 1339 aa27.09■■□□□ 1.93
SLC39A3-202ENST00000455372 CTTNBP2Q8WZ74 1663 aa27.09■■□□□ 1.93
SLC39A3-202ENST00000455372 FHOD3Q2V2M9 1422 aa27.09■■□□□ 1.93
SLC39A3-202ENST00000455372 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
SLC39A3-202ENST00000455372 TDRD9Q8NDG6 1382 aaKnown RBP27.07■■□□□ 1.92
SLC39A3-202ENST00000455372 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
SLC39A3-202ENST00000455372 CFAP43Q8NDM7 1665 aa27.07■■□□□ 1.92
SLC39A3-202ENST00000455372 EFCAB5A4FU69 1503 aa27.07■■□□□ 1.92
SLC39A3-202ENST00000455372 ITGAEP38570 1179 aa27.04■■□□□ 1.92
SLC39A3-202ENST00000455372 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
SLC39A3-202ENST00000455372 PHLDB1Q86UU1 1377 aa27.01■■□□□ 1.91
SLC39A3-202ENST00000455372 GAPVD1Q14C86 1478 aa27.01■■□□□ 1.91
SLC39A3-202ENST00000455372 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
SLC39A3-202ENST00000455372 FYCO1Q9BQS8 1478 aa26.99■■□□□ 1.91
SLC39A3-202ENST00000455372 CASKIN1Q8WXD9 1431 aa26.97■■□□□ 1.91
SLC39A3-202ENST00000455372 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.95e-8■■□□□ 11.9
SLC39A3-202ENST00000455372 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
SLC39A3-202ENST00000455372 RAB3GAP2Q9H2M9 1393 aa26.9■■□□□ 1.9
SLC39A3-202ENST00000455372 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
SLC39A3-202ENST00000455372 NEUROD1Q13562 356 aa26.89■■□□□ 1.89
SLC39A3-202ENST00000455372 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
SLC39A3-202ENST00000455372 SAMD9Q5K651 1589 aa26.87■■□□□ 1.89
SLC39A3-202ENST00000455372 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
SLC39A3-202ENST00000455372 FAM50AQ14320 339 aaKnown RBP26.85■■□□□ 1.89
SLC39A3-202ENST00000455372 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
SLC39A3-202ENST00000455372 MIER1Q8N108 512 aa26.79■■□□□ 1.88
SLC39A3-202ENST00000455372 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
SLC39A3-202ENST00000455372 MAPKBP1O60336 1514 aa26.77■■□□□ 1.88
SLC39A3-202ENST00000455372 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
SLC39A3-202ENST00000455372 LRRIQ1Q96JM4 1722 aa26.75■■□□□ 1.87
SLC39A3-202ENST00000455372 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
SLC39A3-202ENST00000455372 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
SLC39A3-202ENST00000455372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.7■■□□□ 1.862e-9■■■■■ 39.6
SLC39A3-202ENST00000455372 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
SLC39A3-202ENST00000455372 FGD6Q6ZV73 1430 aa26.68■■□□□ 1.86
SLC39A3-202ENST00000455372 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
SLC39A3-202ENST00000455372 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
SLC39A3-202ENST00000455372 YTHDC1Q96MU7 727 aaKnown RBP26.61■■□□□ 1.85
SLC39A3-202ENST00000455372 IQGAP2Q13576 1575 aa26.6■■□□□ 1.85
SLC39A3-202ENST00000455372 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
SLC39A3-202ENST00000455372 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
SLC39A3-202ENST00000455372 EHBP1L1Q8N3D4 1523 aa26.56■■□□□ 1.84
SLC39A3-202ENST00000455372 SUPT6HQ7KZ85 1726 aaKnown RBP26.55■■□□□ 1.84
SLC39A3-202ENST00000455372 GTF3C3Q9Y5Q9 886 aa26.55■■□□□ 1.84
SLC39A3-202ENST00000455372 WDR62O43379 1518 aa26.54■■□□□ 1.84
SLC39A3-202ENST00000455372 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
SLC39A3-202ENST00000455372 MYOM3Q5VTT5 1437 aa26.54■■□□□ 1.84
SLC39A3-202ENST00000455372 MAGI3Q5TCQ9 1506 aa26.53■■□□□ 1.84
SLC39A3-202ENST00000455372 SIN3AQ96ST3 1273 aa26.53■■□□□ 1.84
SLC39A3-202ENST00000455372 PTPRKQ15262 1439 aa26.52■■□□□ 1.84
SLC39A3-202ENST00000455372 CCDC18Q5T9S5 1454 aa26.5■■□□□ 1.83
SLC39A3-202ENST00000455372 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
SLC39A3-202ENST00000455372 UGGT2Q9NYU1 1516 aa26.48■■□□□ 1.83
SLC39A3-202ENST00000455372 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
SLC39A3-202ENST00000455372 HFM1A2PYH4 1435 aa26.45■■□□□ 1.82
SLC39A3-202ENST00000455372 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
SLC39A3-202ENST00000455372 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
SLC39A3-202ENST00000455372 CDK13Q14004 1512 aaKnown RBP26.39■■□□□ 1.82
SLC39A3-202ENST00000455372 EIF4G3O43432 1585 aaKnown RBP26.38■■□□□ 1.81
SLC39A3-202ENST00000455372 NAIPQ13075 1403 aa26.38■■□□□ 1.81
SLC39A3-202ENST00000455372 TIMELESSQ9UNS1 1208 aa26.36■■□□□ 1.81
SLC39A3-202ENST00000455372 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
SLC39A3-202ENST00000455372 UACAQ9BZF9 1416 aa26.35■■□□□ 1.81
SLC39A3-202ENST00000455372 TCOF1Q13428 1488 aaKnown RBP26.33■■□□□ 1.81
SLC39A3-202ENST00000455372 ARID3CA6NKF2 412 aa26.33■■□□□ 1.81
SLC39A3-202ENST00000455372 DISP1Q96F81 1524 aa26.33■■□□□ 1.81
SLC39A3-202ENST00000455372 ERCC6Q03468 1493 aa26.33■■□□□ 1.8
SLC39A3-202ENST00000455372 GRIN2AQ12879 1464 aa26.33■■□□□ 1.8
SLC39A3-202ENST00000455372 KIAA0556O60303 1618 aa26.32■■□□□ 1.8
SLC39A3-202ENST00000455372 PPP1R15AO75807 674 aaPredicted RBP26.28■■□□□ 1.8
SLC39A3-202ENST00000455372 MIA2Q96PC5 1412 aa26.23■■□□□ 1.79
SLC39A3-202ENST00000455372 RRP7BPQ9NSQ0 103 aa26.23■■□□□ 1.79
SLC39A3-202ENST00000455372 CHIC2Q9UKJ5 165 aa26.23■■□□□ 1.79
SLC39A3-202ENST00000455372 NUP153P49790 1475 aaKnown RBP26.21■■□□□ 1.79
SLC39A3-202ENST00000455372 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
SLC39A3-202ENST00000455372 GCC2Q8IWJ2 1684 aa26.21■■□□□ 1.79
SLC39A3-202ENST00000455372 TONSLQ96HA7 1378 aa26.19■■□□□ 1.78
SLC39A3-202ENST00000455372 RAPGEF6Q8TEU7 1601 aa26.19■■□□□ 1.78
SLC39A3-202ENST00000455372 CEP170Q5SW79 1584 aa26.17■■□□□ 1.78
SLC39A3-202ENST00000455372 AKNAQ7Z591 1439 aa26.16■■□□□ 1.78
SLC39A3-202ENST00000455372 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
SLC39A3-202ENST00000455372 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
SLC39A3-202ENST00000455372 KDM6BO15054 1643 aa26.15■■□□□ 1.78
SLC39A3-202ENST00000455372 DDX10Q13206 875 aaKnown RBP26.11■■□□□ 1.77
SLC39A3-202ENST00000455372 HIRIP3Q9BW71 556 aaPredicted RBP26.11■■□□□ 1.77
SLC39A3-202ENST00000455372 DENND4BO75064 1496 aaPredicted RBP26.1■■□□□ 1.77
SLC39A3-202ENST00000455372 FBLN2P98095 1184 aa26.09■■□□□ 1.77
SLC39A3-202ENST00000455372 KDM5BQ9UGL1 1544 aa26.06■■□□□ 1.76
SLC39A3-202ENST00000455372 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
SLC39A3-202ENST00000455372 DAPK1P53355 1430 aa26.05■■□□□ 1.76
SLC39A3-202ENST00000455372 CDK11AQ9UQ88 783 aaPredicted RBP26.05■■□□□ 1.76
SLC39A3-202ENST00000455372 PLB1Q6P1J6 1458 aa26.05■■□□□ 1.76
SLC39A3-202ENST00000455372 NUP160Q12769 1436 aa26.04■■□□□ 1.76
SLC39A3-202ENST00000455372 ZNF644Q9H582 1327 aaPredicted RBP26.04■■□□□ 1.76
SLC39A3-202ENST00000455372 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
SLC39A3-202ENST00000455372 DNMT1P26358 1616 aaKnown RBP26.03■■□□□ 1.76
SLC39A3-202ENST00000455372 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms