RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 CHMP7Q8WUX9 453 aaPredicted RBP26.52■■□□□ 1.84
PDXDC1-204ENST00000455313 ARHGAP35Q9NRY4 1499 aa26.52■■□□□ 1.84
PDXDC1-204ENST00000455313 ARAP1Q96P48 1450 aa26.48■■□□□ 1.83
PDXDC1-204ENST00000455313 FBLN2P98095 1184 aa26.48■■□□□ 1.83
PDXDC1-204ENST00000455313 IQGAP2Q13576 1575 aa26.47■■□□□ 1.83
PDXDC1-204ENST00000455313 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
PDXDC1-204ENST00000455313 CHD1O14646 1710 aa26.44■■□□□ 1.82
PDXDC1-204ENST00000455313 EFCAB5A4FU69 1503 aa26.43■■□□□ 1.82
PDXDC1-204ENST00000455313 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
PDXDC1-204ENST00000455313 KIAA0586Q9BVV6 1533 aa26.42■■□□□ 1.82
PDXDC1-204ENST00000455313 NUP160Q12769 1436 aa26.42■■□□□ 1.82
PDXDC1-204ENST00000455313 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
PDXDC1-204ENST00000455313 UGGT2Q9NYU1 1516 aa26.32■■□□□ 1.8
PDXDC1-204ENST00000455313 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
PDXDC1-204ENST00000455313 P3H3Q8IVL6 736 aa26.29■■□□□ 1.8
PDXDC1-204ENST00000455313 DISP1Q96F81 1524 aa26.21■■□□□ 1.79
PDXDC1-204ENST00000455313 KIAA0556O60303 1618 aa26.21■■□□□ 1.79
PDXDC1-204ENST00000455313 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
PDXDC1-204ENST00000455313 FMN1Q68DA7 1419 aa26.17■■□□□ 1.78
PDXDC1-204ENST00000455313 JPH4Q96JJ6 628 aa26.15■■□□□ 1.78
PDXDC1-204ENST00000455313 PPARGC1BQ86YN6 1023 aaKnown RBP26.13■■□□□ 1.77
PDXDC1-204ENST00000455313 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
PDXDC1-204ENST00000455313 SHROOM2Q13796 1616 aa26.11■■□□□ 1.77
PDXDC1-204ENST00000455313 FYCO1Q9BQS8 1478 aa26.1■■□□□ 1.77
PDXDC1-204ENST00000455313 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
PDXDC1-204ENST00000455313 CARMIL2Q6F5E8 1435 aa26.08■■□□□ 1.77
PDXDC1-204ENST00000455313 APLP2Q06481 763 aa26.08■■□□□ 1.77
PDXDC1-204ENST00000455313 PRG4Q92954 1404 aaPredicted RBP26.04■■□□□ 1.76
PDXDC1-204ENST00000455313 TIAM1Q13009 1591 aa26.01■■□□□ 1.75
PDXDC1-204ENST00000455313 MAP3K1Q13233 1512 aa26■■□□□ 1.75
PDXDC1-204ENST00000455313 TTBK1Q5TCY1 1321 aaPredicted RBP25.99■■□□□ 1.75
PDXDC1-204ENST00000455313 CFAP43Q8NDM7 1665 aa25.99■■□□□ 1.75
PDXDC1-204ENST00000455313 ATP1B4Q9UN42 357 aaPredicted RBP25.97■■□□□ 1.75
PDXDC1-204ENST00000455313 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
PDXDC1-204ENST00000455313 HECW1Q76N89 1606 aa25.95■■□□□ 1.75
PDXDC1-204ENST00000455313 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
PDXDC1-204ENST00000455313 TRIM26Q12899 539 aaPredicted RBP25.93■■□□□ 1.74
PDXDC1-204ENST00000455313 KANK4Q5T7N3 995 aaPredicted RBP25.92■■□□□ 1.74
PDXDC1-204ENST00000455313 RAPGEF6Q8TEU7 1601 aa25.91■■□□□ 1.74
PDXDC1-204ENST00000455313 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
PDXDC1-204ENST00000455313 PLB1Q6P1J6 1458 aa25.87■■□□□ 1.73
PDXDC1-204ENST00000455313 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
PDXDC1-204ENST00000455313 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
PDXDC1-204ENST00000455313 CCDC18Q5T9S5 1454 aa25.86■■□□□ 1.73
PDXDC1-204ENST00000455313 EPRSP07814 1512 aaKnown RBP25.85■■□□□ 1.73
PDXDC1-204ENST00000455313 NUP153P49790 1475 aaKnown RBP25.84■■□□□ 1.73
PDXDC1-204ENST00000455313 PTPRGP23470 1445 aa25.84■■□□□ 1.73
PDXDC1-204ENST00000455313 ABCA8O94911 1581 aa25.83■■□□□ 1.73
PDXDC1-204ENST00000455313 CDK13Q14004 1512 aaKnown RBP25.81■■□□□ 1.72
PDXDC1-204ENST00000455313 ARID3CA6NKF2 412 aa25.74■■□□□ 1.71
PDXDC1-204ENST00000455313 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
PDXDC1-204ENST00000455313 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
PDXDC1-204ENST00000455313 EHBP1L1Q8N3D4 1523 aa25.72■■□□□ 1.71
PDXDC1-204ENST00000455313 UACAQ9BZF9 1416 aa25.7■■□□□ 1.7
PDXDC1-204ENST00000455313 ABCC2Q92887 1545 aa25.66■■□□□ 1.7
PDXDC1-204ENST00000455313 SUPT6HQ7KZ85 1726 aaKnown RBP25.64■■□□□ 1.69
PDXDC1-204ENST00000455313 ATP10BO94823 1461 aa25.63■■□□□ 1.69
PDXDC1-204ENST00000455313 PHLDB1Q86UU1 1377 aa25.62■■□□□ 1.69
PDXDC1-204ENST00000455313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.62■■□□□ 1.69
PDXDC1-204ENST00000455313 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
PDXDC1-204ENST00000455313 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
PDXDC1-204ENST00000455313 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
PDXDC1-204ENST00000455313 UHRF1BP1LA0JNW5 1464 aa25.59■■□□□ 1.69
PDXDC1-204ENST00000455313 CDK11AQ9UQ88 783 aaPredicted RBP25.58■■□□□ 1.68
PDXDC1-204ENST00000455313 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
PDXDC1-204ENST00000455313 TROQ12816 1431 aaPredicted RBP25.55■■□□□ 1.68
PDXDC1-204ENST00000455313 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
PDXDC1-204ENST00000455313 CCNB3Q8WWL7 1395 aa25.52■■□□□ 1.68
PDXDC1-204ENST00000455313 KDM5BQ9UGL1 1544 aa25.5■■□□□ 1.67
PDXDC1-204ENST00000455313 ZCCHC11Q5TAX3 1644 aaKnown RBP25.5■■□□□ 1.67
PDXDC1-204ENST00000455313 KIF14Q15058 1648 aa25.48■■□□□ 1.67
PDXDC1-204ENST00000455313 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
PDXDC1-204ENST00000455313 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
PDXDC1-204ENST00000455313 PLEKHD1A6NEE1 506 aa25.46■■□□□ 1.67
PDXDC1-204ENST00000455313 RIMBP3CA6NJZ7 1639 aa25.44■■□□□ 1.66
PDXDC1-204ENST00000455313 RIMBP3BA6NNM3 1639 aa25.44■■□□□ 1.66
PDXDC1-204ENST00000455313 RIMBP3Q9UFD9 1639 aa25.44■■□□□ 1.66
PDXDC1-204ENST00000455313 PTPN23Q9H3S7 1636 aa25.35■■□□□ 1.65
PDXDC1-204ENST00000455313 ABCC10Q5T3U5 1492 aa25.35■■□□□ 1.65
PDXDC1-204ENST00000455313 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
PDXDC1-204ENST00000455313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
PDXDC1-204ENST00000455313 ITSN2Q9NZM3 1697 aa25.35■■□□□ 1.65
PDXDC1-204ENST00000455313 MIA2Q96PC5 1412 aa25.34■■□□□ 1.65
PDXDC1-204ENST00000455313 GPATCH8Q9UKJ3 1502 aaKnown RBP25.31■■□□□ 1.64
PDXDC1-204ENST00000455313 CDC42BPAQ5VT25 1732 aa25.3■■□□□ 1.64
PDXDC1-204ENST00000455313 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
PDXDC1-204ENST00000455313 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
PDXDC1-204ENST00000455313 WDR7Q9Y4E6 1490 aa25.27■■□□□ 1.64
PDXDC1-204ENST00000455313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.27■■□□□ 1.642e-7■■■■■ 47.7
PDXDC1-204ENST00000455313 ITGAEP38570 1179 aa25.26■■□□□ 1.63
PDXDC1-204ENST00000455313 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
PDXDC1-204ENST00000455313 ASXL2Q76L83 1435 aa25.23■■□□□ 1.63
PDXDC1-204ENST00000455313 PREX2Q70Z35 1606 aa25.22■■□□□ 1.63
PDXDC1-204ENST00000455313 NPM1P06748 294 aaKnown RBP eCLIP25.22■■□□□ 1.63
PDXDC1-204ENST00000455313 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
PDXDC1-204ENST00000455313 CFDP1Q9UEE9 299 aaPredicted RBP25.21■■□□□ 1.63
PDXDC1-204ENST00000455313 CDC42BPBQ9Y5S2 1711 aa25.19■■□□□ 1.62
PDXDC1-204ENST00000455313 MYO5CQ9NQX4 1742 aa25.19■■□□□ 1.62
PDXDC1-204ENST00000455313 CAMSAP2Q08AD1 1489 aa25.18■■□□□ 1.62
PDXDC1-204ENST00000455313 ZNF644Q9H582 1327 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms