RNA–Protein interactions for RNA: ENST00000455098.2

PDE3B-202, Transcript of phosphodiesterase 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE3B, Length 3,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-202ENST00000455098 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
PDE3B-202ENST00000455098 DDX10Q13206 875 aaKnown RBP21.62■■□□□ 1.05
PDE3B-202ENST00000455098 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
PDE3B-202ENST00000455098 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.05
PDE3B-202ENST00000455098 FHOD3Q2V2M9 1422 aa21.57■■□□□ 1.04
PDE3B-202ENST00000455098 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
PDE3B-202ENST00000455098 BCANQ96GW7 911 aa21.57■■□□□ 1.04
PDE3B-202ENST00000455098 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
PDE3B-202ENST00000455098 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
PDE3B-202ENST00000455098 MYT1LQ9UL68 1186 aa21.54■■□□□ 1.04
PDE3B-202ENST00000455098 PRXQ9BXM0 1461 aa21.52■■□□□ 1.04
PDE3B-202ENST00000455098 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
PDE3B-202ENST00000455098 ZNF777Q9ULD5 760 aaPredicted RBP21.51■■□□□ 1.03
PDE3B-202ENST00000455098 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
PDE3B-202ENST00000455098 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
PDE3B-202ENST00000455098 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
PDE3B-202ENST00000455098 RAB3GAP2Q9H2M9 1393 aa21.47■■□□□ 1.03
PDE3B-202ENST00000455098 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.035e-6■□□□□ 8.5
PDE3B-202ENST00000455098 ZNF326Q5BKZ1 582 aaKnown RBP21.42■■□□□ 1.02
PDE3B-202ENST00000455098 FOXD1Q16676 465 aa21.39■■□□□ 1.02
PDE3B-202ENST00000455098 PHLDB1Q86UU1 1377 aa21.39■■□□□ 1.01
PDE3B-202ENST00000455098 SENP3-EIF4A1A0A087X0R7 540 aa21.38■■□□□ 1.01
PDE3B-202ENST00000455098 TOPBP1Q92547 1522 aa21.33■■□□□ 1.01
PDE3B-202ENST00000455098 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
PDE3B-202ENST00000455098 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
PDE3B-202ENST00000455098 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
PDE3B-202ENST00000455098 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
PDE3B-202ENST00000455098 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
PDE3B-202ENST00000455098 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
PDE3B-202ENST00000455098 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
PDE3B-202ENST00000455098 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
PDE3B-202ENST00000455098 ANP32CO43423 234 aa21.18■□□□□ 0.98
PDE3B-202ENST00000455098 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
PDE3B-202ENST00000455098 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
PDE3B-202ENST00000455098 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
PDE3B-202ENST00000455098 IRX6P78412 446 aaPredicted RBP21.13■□□□□ 0.97
PDE3B-202ENST00000455098 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
PDE3B-202ENST00000455098 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
PDE3B-202ENST00000455098 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
PDE3B-202ENST00000455098 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
PDE3B-202ENST00000455098 ZNF644Q9H582 1327 aaPredicted RBP21.1■□□□□ 0.97
PDE3B-202ENST00000455098 FKBP8Q14318 412 aa21.1■□□□□ 0.97
PDE3B-202ENST00000455098 CLSPNQ9HAW4 1339 aa21.1■□□□□ 0.97
PDE3B-202ENST00000455098 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
PDE3B-202ENST00000455098 NEFLP07196 543 aa21.07■□□□□ 0.96
PDE3B-202ENST00000455098 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
PDE3B-202ENST00000455098 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
PDE3B-202ENST00000455098 PPP1R15AO75807 674 aaPredicted RBP21.04■□□□□ 0.96
PDE3B-202ENST00000455098 KDM2AQ9Y2K7 1162 aa21.03■□□□□ 0.96
PDE3B-202ENST00000455098 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
PDE3B-202ENST00000455098 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
PDE3B-202ENST00000455098 HNRNPUQ00839 825 aaKnown RBP eCLIP21.01■□□□□ 0.95
PDE3B-202ENST00000455098 TIAM1Q13009 1591 aa21.01■□□□□ 0.95
PDE3B-202ENST00000455098 FMN1Q68DA7 1419 aa21■□□□□ 0.95
PDE3B-202ENST00000455098 PCF11O94913 1555 aaKnown RBP20.99■□□□□ 0.95
PDE3B-202ENST00000455098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.954e-9■■■■□ 20.7
PDE3B-202ENST00000455098 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
PDE3B-202ENST00000455098 CFDP1Q9UEE9 299 aaPredicted RBP20.97■□□□□ 0.95
PDE3B-202ENST00000455098 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
PDE3B-202ENST00000455098 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
PDE3B-202ENST00000455098 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
PDE3B-202ENST00000455098 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
PDE3B-202ENST00000455098 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
PDE3B-202ENST00000455098 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
PDE3B-202ENST00000455098 WDR97A6NE52 1622 aa20.9■□□□□ 0.94
PDE3B-202ENST00000455098 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
PDE3B-202ENST00000455098 L3MBTL2Q969R5 705 aa20.9■□□□□ 0.94
PDE3B-202ENST00000455098 SALL2Q9Y467 1007 aaPredicted RBP20.89■□□□□ 0.93
PDE3B-202ENST00000455098 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
PDE3B-202ENST00000455098 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
PDE3B-202ENST00000455098 IFT140Q96RY7 1462 aa20.87■□□□□ 0.93
PDE3B-202ENST00000455098 MYT1Q01538 1121 aa20.87■□□□□ 0.93
PDE3B-202ENST00000455098 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
PDE3B-202ENST00000455098 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
PDE3B-202ENST00000455098 CCDC18Q5T9S5 1454 aa20.86■□□□□ 0.93
PDE3B-202ENST00000455098 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
PDE3B-202ENST00000455098 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
PDE3B-202ENST00000455098 EIF4G2P78344 907 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDE3B-202ENST00000455098 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
PDE3B-202ENST00000455098 TSPY4P0CV99 314 aa20.82■□□□□ 0.92
PDE3B-202ENST00000455098 TSPY10P0CW01 314 aa20.82■□□□□ 0.92
PDE3B-202ENST00000455098 CARMIL2Q6F5E8 1435 aa20.82■□□□□ 0.92
PDE3B-202ENST00000455098 CDK13Q14004 1512 aaKnown RBP20.82■□□□□ 0.92
PDE3B-202ENST00000455098 MAPKBP1O60336 1514 aa20.8■□□□□ 0.92
PDE3B-202ENST00000455098 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
PDE3B-202ENST00000455098 FYCO1Q9BQS8 1478 aa20.78■□□□□ 0.92
PDE3B-202ENST00000455098 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■■■■ 29.5
PDE3B-202ENST00000455098 MYOM3Q5VTT5 1437 aa20.77■□□□□ 0.92
PDE3B-202ENST00000455098 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
PDE3B-202ENST00000455098 PKD2Q13563 968 aa20.75■□□□□ 0.91
PDE3B-202ENST00000455098 PTPRGP23470 1445 aa20.74■□□□□ 0.91
PDE3B-202ENST00000455098 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
PDE3B-202ENST00000455098 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
PDE3B-202ENST00000455098 NAIPQ13075 1403 aa20.68■□□□□ 0.9
PDE3B-202ENST00000455098 PRG4Q92954 1404 aaPredicted RBP20.67■□□□□ 0.9
PDE3B-202ENST00000455098 C11orf95C9JLR9 678 aaPredicted RBP20.66■□□□□ 0.9
PDE3B-202ENST00000455098 NBPF8Q3BBV2 869 aa20.66■□□□□ 0.9
PDE3B-202ENST00000455098 DCAF11Q8TEB1 546 aa20.65■□□□□ 0.9
PDE3B-202ENST00000455098 WASHC2AQ641Q2 1341 aa20.65■□□□□ 0.9
PDE3B-202ENST00000455098 CHGAP10645 457 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms