RNA–Protein interactions for RNA: ENST00000454909.6

SATB1-209, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 3,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-209ENST00000454909 IQGAP2Q13576 1575 aa9.72□□□□□ -0.85
SATB1-209ENST00000454909 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
SATB1-209ENST00000454909 GRIN2AQ12879 1464 aa9.72□□□□□ -0.85
SATB1-209ENST00000454909 ARHGAP35Q9NRY4 1499 aa9.71□□□□□ -0.85
SATB1-209ENST00000454909 UGGT2Q9NYU1 1516 aa9.69□□□□□ -0.86
SATB1-209ENST00000454909 CHD1O14646 1710 aa9.68□□□□□ -0.86
SATB1-209ENST00000454909 MAP3K1Q13233 1512 aa9.67□□□□□ -0.86
SATB1-209ENST00000454909 KIAA0586Q9BVV6 1533 aa9.67□□□□□ -0.86
SATB1-209ENST00000454909 NUP160Q12769 1436 aa9.67□□□□□ -0.86
SATB1-209ENST00000454909 CFAP43Q8NDM7 1665 aa9.67□□□□□ -0.86
SATB1-209ENST00000454909 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
SATB1-209ENST00000454909 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
SATB1-209ENST00000454909 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
SATB1-209ENST00000454909 FYCO1Q9BQS8 1478 aa9.63□□□□□ -0.87
SATB1-209ENST00000454909 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
SATB1-209ENST00000454909 SHROOM2Q13796 1616 aa9.62□□□□□ -0.87
SATB1-209ENST00000454909 FMN1Q68DA7 1419 aa9.62□□□□□ -0.87
SATB1-209ENST00000454909 TIAM1Q13009 1591 aa9.6□□□□□ -0.87
SATB1-209ENST00000454909 CASKIN1Q8WXD9 1431 aa9.59□□□□□ -0.87
SATB1-209ENST00000454909 HECW1Q76N89 1606 aa9.59□□□□□ -0.87
SATB1-209ENST00000454909 CLASP1Q7Z460 1538 aa9.58□□□□□ -0.88
SATB1-209ENST00000454909 DISP1Q96F81 1524 aa9.58□□□□□ -0.88
SATB1-209ENST00000454909 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
SATB1-209ENST00000454909 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
SATB1-209ENST00000454909 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
SATB1-209ENST00000454909 CCDC18Q5T9S5 1454 aa9.56□□□□□ -0.88
SATB1-209ENST00000454909 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
SATB1-209ENST00000454909 RAPGEF6Q8TEU7 1601 aa9.54□□□□□ -0.88
SATB1-209ENST00000454909 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
SATB1-209ENST00000454909 EHBP1L1Q8N3D4 1523 aa9.51□□□□□ -0.89
SATB1-209ENST00000454909 APLP2Q06481 763 aa9.51□□□□□ -0.89
SATB1-209ENST00000454909 LRRC9Q6ZRR7 1453 aa9.5□□□□□ -0.89
SATB1-209ENST00000454909 ABCA8O94911 1581 aa9.5□□□□□ -0.89
SATB1-209ENST00000454909 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
SATB1-209ENST00000454909 ADCY10Q96PN6 1610 aa9.47□□□□□ -0.89
SATB1-209ENST00000454909 RANGAP1P46060 587 aaPredicted RBP9.47□□□□□ -0.89
SATB1-209ENST00000454909 EPRSP07814 1512 aaKnown RBP9.46□□□□□ -0.89
SATB1-209ENST00000454909 ARHGEF11O15085 1522 aa9.45□□□□□ -0.9
SATB1-209ENST00000454909 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
SATB1-209ENST00000454909 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
SATB1-209ENST00000454909 PRG4Q92954 1404 aaPredicted RBP9.44□□□□□ -0.9
SATB1-209ENST00000454909 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
SATB1-209ENST00000454909 FBLN2P98095 1184 aa9.44□□□□□ -0.9
SATB1-209ENST00000454909 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
SATB1-209ENST00000454909 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
SATB1-209ENST00000454909 ITSN2Q9NZM3 1697 aa9.41□□□□□ -0.9
SATB1-209ENST00000454909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
SATB1-209ENST00000454909 ABCC2Q92887 1545 aa9.41□□□□□ -0.9
SATB1-209ENST00000454909 MAGI3Q5TCQ9 1506 aa9.4□□□□□ -0.9
SATB1-209ENST00000454909 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.91
SATB1-209ENST00000454909 CDK13Q14004 1512 aaKnown RBP9.39□□□□□ -0.91
SATB1-209ENST00000454909 ERCC6L2Q5T890 1561 aa9.38□□□□□ -0.91
SATB1-209ENST00000454909 PLB1Q6P1J6 1458 aa9.38□□□□□ -0.91
SATB1-209ENST00000454909 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
SATB1-209ENST00000454909 PTPRGP23470 1445 aa9.38□□□□□ -0.91
SATB1-209ENST00000454909 MTUS2Q5JR59 1369 aa9.38□□□□□ -0.91
SATB1-209ENST00000454909 NCOA2Q15596 1464 aa9.37□□□□□ -0.91
SATB1-209ENST00000454909 UACAQ9BZF9 1416 aa9.37□□□□□ -0.91
SATB1-209ENST00000454909 KIF14Q15058 1648 aa9.37□□□□□ -0.91
SATB1-209ENST00000454909 TCOF1Q13428 1488 aaKnown RBP9.36□□□□□ -0.91
SATB1-209ENST00000454909 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
SATB1-209ENST00000454909 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
SATB1-209ENST00000454909 MYOM3Q5VTT5 1437 aa9.35□□□□□ -0.91
SATB1-209ENST00000454909 ZCCHC11Q5TAX3 1644 aaKnown RBP9.35□□□□□ -0.91
SATB1-209ENST00000454909 PTPN23Q9H3S7 1636 aa9.35□□□□□ -0.91
SATB1-209ENST00000454909 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
SATB1-209ENST00000454909 PHLDB1Q86UU1 1377 aa9.34□□□□□ -0.91
SATB1-209ENST00000454909 FGD6Q6ZV73 1430 aa9.34□□□□□ -0.91
SATB1-209ENST00000454909 ATP10BO94823 1461 aa9.34□□□□□ -0.91
SATB1-209ENST00000454909 KDM5BQ9UGL1 1544 aa9.34□□□□□ -0.91
SATB1-209ENST00000454909 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.92
SATB1-209ENST00000454909 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
SATB1-209ENST00000454909 CDC42BPAQ5VT25 1732 aa9.32□□□□□ -0.92
SATB1-209ENST00000454909 OSCARQ8IYS5 282 aa9.32□□□□□ -0.92
SATB1-209ENST00000454909 PREX2Q70Z35 1606 aa9.31□□□□□ -0.92
SATB1-209ENST00000454909 CROCC2H7BZ55 1655 aa9.3□□□□□ -0.92
SATB1-209ENST00000454909 ABCC10Q5T3U5 1492 aa9.3□□□□□ -0.92
SATB1-209ENST00000454909 ATP1B4Q9UN42 357 aaPredicted RBP9.3□□□□□ -0.92
SATB1-209ENST00000454909 MYO5CQ9NQX4 1742 aa9.3□□□□□ -0.92
SATB1-209ENST00000454909 GCC2Q8IWJ2 1684 aa9.29□□□□□ -0.92
SATB1-209ENST00000454909 DNMT1P26358 1616 aaKnown RBP9.29□□□□□ -0.92
SATB1-209ENST00000454909 ADGBQ8N7X0 1667 aa9.29□□□□□ -0.92
SATB1-209ENST00000454909 ARAP3Q8WWN8 1544 aa9.28□□□□□ -0.92
SATB1-209ENST00000454909 AKNAQ7Z591 1439 aa9.28□□□□□ -0.92
SATB1-209ENST00000454909 CDC42BPBQ9Y5S2 1711 aa9.26□□□□□ -0.93
SATB1-209ENST00000454909 TTBK1Q5TCY1 1321 aaPredicted RBP9.26□□□□□ -0.93
SATB1-209ENST00000454909 ARHGEF5Q12774 1597 aa9.25□□□□□ -0.93
SATB1-209ENST00000454909 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
SATB1-209ENST00000454909 RIMBP3CA6NJZ7 1639 aa9.25□□□□□ -0.93
SATB1-209ENST00000454909 RIMBP3BA6NNM3 1639 aa9.25□□□□□ -0.93
SATB1-209ENST00000454909 ABCA9Q8IUA7 1624 aa9.25□□□□□ -0.93
SATB1-209ENST00000454909 RIMBP3Q9UFD9 1639 aa9.25□□□□□ -0.93
SATB1-209ENST00000454909 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
SATB1-209ENST00000454909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.24□□□□□ -0.93
SATB1-209ENST00000454909 CAMSAP2Q08AD1 1489 aa9.23□□□□□ -0.93
SATB1-209ENST00000454909 PLEKHD1A6NEE1 506 aa9.23□□□□□ -0.93
SATB1-209ENST00000454909 SHANK2Q9UPX8 1470 aa9.23□□□□□ -0.93
SATB1-209ENST00000454909 WDR7Q9Y4E6 1490 aa9.23□□□□□ -0.93
SATB1-209ENST00000454909 ZEB1P37275 1124 aaPredicted RBP9.22□□□□□ -0.93
SATB1-209ENST00000454909 CFAP74Q9C0B2 1584 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms