RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ERCC6L2Q5T890 1561 aa11.19□□□□□ -0.62
SBDSP1-204ENST00000453858 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
SBDSP1-204ENST00000453858 CHD1O14646 1710 aa11.17□□□□□ -0.62
SBDSP1-204ENST00000453858 FBLN2P98095 1184 aa11.13□□□□□ -0.63
SBDSP1-204ENST00000453858 CLASP1Q7Z460 1538 aa11.13□□□□□ -0.63
SBDSP1-204ENST00000453858 CFTRP13569 1480 aa11.12□□□□□ -0.63
SBDSP1-204ENST00000453858 HECW2Q9P2P5 1572 aa11.11□□□□□ -0.63
SBDSP1-204ENST00000453858 EIF4G3O43432 1585 aaKnown RBP11.09□□□□□ -0.63
SBDSP1-204ENST00000453858 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.63
SBDSP1-204ENST00000453858 ABCB7O75027 752 aa11.09□□□□□ -0.63
SBDSP1-204ENST00000453858 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
SBDSP1-204ENST00000453858 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
SBDSP1-204ENST00000453858 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
SBDSP1-204ENST00000453858 SYNJ2O15056 1496 aa11.04□□□□□ -0.64
SBDSP1-204ENST00000453858 DISP3Q9P2K9 1392 aa10.99□□□□□ -0.65
SBDSP1-204ENST00000453858 ADGRL1O94910 1474 aa10.97□□□□□ -0.65
SBDSP1-204ENST00000453858 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
SBDSP1-204ENST00000453858 TARBP1Q13395 1621 aaKnown RBP10.95□□□□□ -0.66
SBDSP1-204ENST00000453858 FAM69CQ0P6D2 419 aa10.95□□□□□ -0.66
SBDSP1-204ENST00000453858 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
SBDSP1-204ENST00000453858 CHMP7Q8WUX9 453 aaPredicted RBP10.93□□□□□ -0.66
SBDSP1-204ENST00000453858 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
SBDSP1-204ENST00000453858 POLA2Q14181 598 aa10.92□□□□□ -0.66
SBDSP1-204ENST00000453858 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
SBDSP1-204ENST00000453858 ABCC10Q5T3U5 1492 aa10.91□□□□□ -0.66
SBDSP1-204ENST00000453858 POTEHQ6S545 545 aa10.9□□□□□ -0.66
SBDSP1-204ENST00000453858 KDM6BO15054 1643 aa10.9□□□□□ -0.66
SBDSP1-204ENST00000453858 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
SBDSP1-204ENST00000453858 TDRD9Q8NDG6 1382 aaKnown RBP10.87□□□□□ -0.67
SBDSP1-204ENST00000453858 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
SBDSP1-204ENST00000453858 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
SBDSP1-204ENST00000453858 WIZO95785 1651 aa10.8□□□□□ -0.68
SBDSP1-204ENST00000453858 DIP2BQ9P265 1576 aa10.79□□□□□ -0.68
SBDSP1-204ENST00000453858 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
SBDSP1-204ENST00000453858 POLA1P09884 1462 aaPredicted RBP10.79□□□□□ -0.68
SBDSP1-204ENST00000453858 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
SBDSP1-204ENST00000453858 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
SBDSP1-204ENST00000453858 MAPKBP1O60336 1514 aa10.75□□□□□ -0.69
SBDSP1-204ENST00000453858 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
SBDSP1-204ENST00000453858 SOGA1O94964 1423 aa10.74□□□□□ -0.69
SBDSP1-204ENST00000453858 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
SBDSP1-204ENST00000453858 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
SBDSP1-204ENST00000453858 GRIN2BQ13224 1484 aa10.72□□□□□ -0.69
SBDSP1-204ENST00000453858 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
SBDSP1-204ENST00000453858 SPATA31D1Q6ZQQ2 1576 aa10.7□□□□□ -0.7
SBDSP1-204ENST00000453858 TSPOAP1O95153 1857 aa10.69□□□□□ -0.7
SBDSP1-204ENST00000453858 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
SBDSP1-204ENST00000453858 SRCAPQ6ZRS2 3230 aa10.68□□□□□ -0.7
SBDSP1-204ENST00000453858 SHROOM2Q13796 1616 aa10.66□□□□□ -0.7
SBDSP1-204ENST00000453858 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
SBDSP1-204ENST00000453858 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
SBDSP1-204ENST00000453858 NUP160Q12769 1436 aa10.65□□□□□ -0.7
SBDSP1-204ENST00000453858 CHRDL2Q6WN34 429 aa10.62□□□□□ -0.71
SBDSP1-204ENST00000453858 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
SBDSP1-204ENST00000453858 PPRC1Q5VV67 1664 aaKnown RBP10.61□□□□□ -0.71
SBDSP1-204ENST00000453858 PRG4Q92954 1404 aaPredicted RBP10.58□□□□□ -0.72
SBDSP1-204ENST00000453858 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
SBDSP1-204ENST00000453858 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
SBDSP1-204ENST00000453858 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
SBDSP1-204ENST00000453858 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
SBDSP1-204ENST00000453858 CCDC88BA6NC98 1476 aa10.56□□□□□ -0.72
SBDSP1-204ENST00000453858 FKBP8Q14318 412 aa10.56□□□□□ -0.72
SBDSP1-204ENST00000453858 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
SBDSP1-204ENST00000453858 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
SBDSP1-204ENST00000453858 PTPRMP28827 1452 aa10.53□□□□□ -0.72
SBDSP1-204ENST00000453858 GLI2P10070 1586 aa10.52□□□□□ -0.73
SBDSP1-204ENST00000453858 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
SBDSP1-204ENST00000453858 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
SBDSP1-204ENST00000453858 PBRM1Q86U86 1689 aa10.5□□□□□ -0.73
SBDSP1-204ENST00000453858 HSPA2P54652 639 aa10.49□□□□□ -0.73
SBDSP1-204ENST00000453858 SPDYE2BA6NHP3 402 aa10.45□□□□□ -0.74
SBDSP1-204ENST00000453858 SPDYE6P0CI01 402 aa10.45□□□□□ -0.74
SBDSP1-204ENST00000453858 SPDYE2Q495Y8 402 aa10.45□□□□□ -0.74
SBDSP1-204ENST00000453858 ADAMTSL3P82987 1691 aa10.44□□□□□ -0.74
SBDSP1-204ENST00000453858 ABCA5Q8WWZ7 1642 aa10.44□□□□□ -0.74
SBDSP1-204ENST00000453858 ASXL2Q76L83 1435 aa10.43□□□□□ -0.74
SBDSP1-204ENST00000453858 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
SBDSP1-204ENST00000453858 CUX1P39880 1505 aa10.43□□□□□ -0.74
SBDSP1-204ENST00000453858 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
SBDSP1-204ENST00000453858 PLB1Q6P1J6 1458 aa10.41□□□□□ -0.74
SBDSP1-204ENST00000453858 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
SBDSP1-204ENST00000453858 FHAD1B1AJZ9 1412 aa10.4□□□□□ -0.75
SBDSP1-204ENST00000453858 TEX14Q8IWB6 1497 aa10.38□□□□□ -0.75
SBDSP1-204ENST00000453858 MAP3K4Q9Y6R4 1608 aa10.38□□□□□ -0.75
SBDSP1-204ENST00000453858 PITPNM1O00562 1244 aa10.37□□□□□ -0.75
SBDSP1-204ENST00000453858 EPRSP07814 1512 aaKnown RBP10.37□□□□□ -0.75
SBDSP1-204ENST00000453858 KIF21BO75037 1637 aa10.36□□□□□ -0.75
SBDSP1-204ENST00000453858 ABCC2Q92887 1545 aa10.36□□□□□ -0.75
SBDSP1-204ENST00000453858 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
SBDSP1-204ENST00000453858 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
SBDSP1-204ENST00000453858 KIAA0586Q9BVV6 1533 aa10.32□□□□□ -0.76
SBDSP1-204ENST00000453858 PROM2Q8N271 834 aa10.3□□□□□ -0.76
SBDSP1-204ENST00000453858 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
SBDSP1-204ENST00000453858 PTPRGP23470 1445 aa10.29□□□□□ -0.76
SBDSP1-204ENST00000453858 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
SBDSP1-204ENST00000453858 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
SBDSP1-204ENST00000453858 MADDQ8WXG6 1647 aa10.28□□□□□ -0.76
SBDSP1-204ENST00000453858 RUSC2Q8N2Y8 1516 aa10.28□□□□□ -0.76
SBDSP1-204ENST00000453858 YEATS2Q9ULM3 1422 aa10.27□□□□□ -0.77
SBDSP1-204ENST00000453858 LTBP4Q8N2S1 1624 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms