RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
CHKB-CPT1B-202ENST00000453634 TIAM1Q13009 1591 aa15.79■□□□□ 0.12
CHKB-CPT1B-202ENST00000453634 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■■■□□ 14.7
CHKB-CPT1B-202ENST00000453634 CUX1P39880 1505 aa15.75■□□□□ 0.11
CHKB-CPT1B-202ENST00000453634 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
CHKB-CPT1B-202ENST00000453634 ITGAEP38570 1179 aa15.75■□□□□ 0.11
CHKB-CPT1B-202ENST00000453634 ANP32CO43423 234 aa15.74■□□□□ 0.11
CHKB-CPT1B-202ENST00000453634 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
CHKB-CPT1B-202ENST00000453634 MSH5O43196 834 aa15.71■□□□□ 0.11
CHKB-CPT1B-202ENST00000453634 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
CHKB-CPT1B-202ENST00000453634 TRIM52Q96A61 297 aa15.69■□□□□ 0.1
CHKB-CPT1B-202ENST00000453634 PHLDB1Q86UU1 1377 aa15.67■□□□□ 0.1
CHKB-CPT1B-202ENST00000453634 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
CHKB-CPT1B-202ENST00000453634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHKB-CPT1B-202ENST00000453634 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
CHKB-CPT1B-202ENST00000453634 MYT1LQ9UL68 1186 aa15.64■□□□□ 0.09
CHKB-CPT1B-202ENST00000453634 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
CHKB-CPT1B-202ENST00000453634 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
CHKB-CPT1B-202ENST00000453634 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
CHKB-CPT1B-202ENST00000453634 IGF1RP08069 1367 aa15.59■□□□□ 0.09
CHKB-CPT1B-202ENST00000453634 CFTRP13569 1480 aa15.58■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 ERICH6Q7L0X2 663 aa15.55■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 TONSLQ96HA7 1378 aa15.55■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 PCF11O94913 1555 aaKnown RBP15.54■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 PRDM2Q13029 1718 aa15.52■□□□□ 0.08
CHKB-CPT1B-202ENST00000453634 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 FYCO1Q9BQS8 1478 aa15.51■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 HFM1A2PYH4 1435 aa15.48■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 EFCAB5A4FU69 1503 aa15.46■□□□□ 0.07
CHKB-CPT1B-202ENST00000453634 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
CHKB-CPT1B-202ENST00000453634 PTPN23Q9H3S7 1636 aa15.45■□□□□ 0.06
CHKB-CPT1B-202ENST00000453634 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
CHKB-CPT1B-202ENST00000453634 IRX6P78412 446 aaPredicted RBP15.43■□□□□ 0.06
CHKB-CPT1B-202ENST00000453634 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
CHKB-CPT1B-202ENST00000453634 DEKP35659 375 aaKnown RBP15.39■□□□□ 0.06
CHKB-CPT1B-202ENST00000453634 NAIPQ13075 1403 aa15.39■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 FHOD3Q2V2M9 1422 aa15.37■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 FMN1Q68DA7 1419 aa15.35■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
CHKB-CPT1B-202ENST00000453634 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 HECW1Q76N89 1606 aa15.32■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 PRKRIP1Q9H875 184 aaPredicted RBP15.31■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 CUL7Q14999 1698 aa15.28■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 CCDC7Q96M83 1385 aa15.28■□□□□ 0.04
CHKB-CPT1B-202ENST00000453634 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 SUPT6HQ7KZ85 1726 aaKnown RBP15.27■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 SMG6Q86US8 1419 aaKnown RBP15.26■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 MRS2Q9HD23 443 aa15.25■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 LRRIQ1Q96JM4 1722 aa15.24■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 EHBP1L1Q8N3D4 1523 aa15.24■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 RNF123Q5XPI4 1314 aa15.24■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 TCOF1Q13428 1488 aaKnown RBP15.23■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 GRIN2BQ13224 1484 aa15.22■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 UGGT2Q9NYU1 1516 aa15.22■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 C11orf95C9JLR9 678 aaPredicted RBP15.21■□□□□ 0.03
CHKB-CPT1B-202ENST00000453634 ANP32AP39687 249 aaKnown RBP15.19■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 NBR1Q14596 966 aa15.18■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 L3MBTL2Q969R5 705 aa15.17■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 NUDCQ9Y266 331 aa15.16■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
CHKB-CPT1B-202ENST00000453634 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms