RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 RIMBP3BA6NNM3 1639 aa40.42■■■■■ 4.06
TPR-202ENST00000451586 RIMBP3Q9UFD9 1639 aa40.42■■■■■ 4.06
TPR-202ENST00000451586 KIAA0586Q9BVV6 1533 aa40.39■■■■■ 4.06
TPR-202ENST00000451586 JPH4Q96JJ6 628 aa40.36■■■■■ 4.05
TPR-202ENST00000451586 SHROOM2Q13796 1616 aa40.31■■■■■ 4.04
TPR-202ENST00000451586 ERCC6L2Q5T890 1561 aa40.23■■■■■ 4.03
TPR-202ENST00000451586 PRG4Q92954 1404 aaPredicted RBP40.22■■■■■ 4.03
TPR-202ENST00000451586 IQGAP2Q13576 1575 aa40.19■■■■■ 4.02
TPR-202ENST00000451586 KIF21BO75037 1637 aa40.18■■■■■ 4.02
TPR-202ENST00000451586 ARAP1Q96P48 1450 aa40.16■■■■■ 4.02
TPR-202ENST00000451586 CYB5RLQ6IPT4 315 aa40.16■■■■■ 4.02
TPR-202ENST00000451586 EHMT2Q96KQ7 1210 aa40.14■■■■■ 4.02
TPR-202ENST00000451586 CTTNBP2Q8WZ74 1663 aa40.13■■■■■ 4.01
TPR-202ENST00000451586 UGGT2Q9NYU1 1516 aa40■■■■□ 3.99
TPR-202ENST00000451586 GOLGA3Q08378 1498 aa40■■■■□ 3.99
TPR-202ENST00000451586 UBTFP17480 764 aaKnown RBP39.97■■■■□ 3.99
TPR-202ENST00000451586 CARMIL2Q6F5E8 1435 aa39.95■■■■□ 3.99
TPR-202ENST00000451586 DISP1Q96F81 1524 aa39.91■■■■□ 3.98
TPR-202ENST00000451586 RANGAP1P46060 587 aaPredicted RBP39.83■■■■□ 3.97
TPR-202ENST00000451586 TTBK1Q5TCY1 1321 aaPredicted RBP39.83■■■■□ 3.97
TPR-202ENST00000451586 TNIKQ9UKE5 1360 aa39.82■■■■□ 3.96
TPR-202ENST00000451586 KIAA0556O60303 1618 aa39.81■■■■□ 3.96
TPR-202ENST00000451586 PTPRGP23470 1445 aa39.79■■■■□ 3.96
TPR-202ENST00000451586 P3H3Q8IVL6 736 aa39.73■■■■□ 3.95
TPR-202ENST00000451586 SAMD9Q5K651 1589 aa39.65■■■■□ 3.94
TPR-202ENST00000451586 LOC105371045A0A1W2PR82 267 aa39.58■■■■□ 3.93
TPR-202ENST00000451586 ADCY10Q96PN6 1610 aa39.52■■■■□ 3.92
TPR-202ENST00000451586 EFCAB5A4FU69 1503 aa39.51■■■■□ 3.92
TPR-202ENST00000451586 UACAQ9BZF9 1416 aa39.51■■■■□ 3.92
TPR-202ENST00000451586 FHOD3Q2V2M9 1422 aa39.5■■■■□ 3.91
TPR-202ENST00000451586 ARHGAP35Q9NRY4 1499 aa39.44■■■■□ 3.9
TPR-202ENST00000451586 PLB1Q6P1J6 1458 aa39.43■■■■□ 3.9
TPR-202ENST00000451586 NPM1P06748 294 aaKnown RBP eCLIP39.43■■■■□ 3.9
TPR-202ENST00000451586 UHRF1BP1LA0JNW5 1464 aa39.42■■■■□ 3.9
TPR-202ENST00000451586 ABCC2Q92887 1545 aa39.4■■■■□ 3.9
TPR-202ENST00000451586 ABCA8O94911 1581 aa39.37■■■■□ 3.89
TPR-202ENST00000451586 CLIP1P30622 1438 aa39.31■■■■□ 3.88
TPR-202ENST00000451586 KDM5BQ9UGL1 1544 aa39.24■■■■□ 3.87
TPR-202ENST00000451586 TRHP20396 242 aaPredicted RBP39.23■■■■□ 3.87
TPR-202ENST00000451586 RAPGEF6Q8TEU7 1601 aa39.22■■■■□ 3.87
TPR-202ENST00000451586 CEP162Q5TB80 1403 aa39.22■■■■□ 3.87
TPR-202ENST00000451586 ARID3CA6NKF2 412 aa39.19■■■■□ 3.86
TPR-202ENST00000451586 FMN1Q68DA7 1419 aa39.18■■■■□ 3.86
TPR-202ENST00000451586 MAPKBP1O60336 1514 aa39.18■■■■□ 3.86
TPR-202ENST00000451586 ZCCHC11Q5TAX3 1644 aaKnown RBP39.17■■■■□ 3.86
TPR-202ENST00000451586 ATP10BO94823 1461 aa39.1■■■■□ 3.85
TPR-202ENST00000451586 NUP153P49790 1475 aaKnown RBP39.1■■■■□ 3.85
TPR-202ENST00000451586 ASXL2Q76L83 1435 aa39.09■■■■□ 3.85
TPR-202ENST00000451586 ATP1B4Q9UN42 357 aaPredicted RBP39.07■■■■□ 3.85
TPR-202ENST00000451586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.02■■■■□ 3.84
TPR-202ENST00000451586 HNRNPUL2Q1KMD3 747 aaKnown RBP39.02■■■■□ 3.84
TPR-202ENST00000451586 ABCC10Q5T3U5 1492 aa38.99■■■■□ 3.83
TPR-202ENST00000451586 FAM69CQ0P6D2 419 aa38.97■■■■□ 3.83
TPR-202ENST00000451586 HECW1Q76N89 1606 aa38.93■■■■□ 3.82
TPR-202ENST00000451586 CASKIN1Q8WXD9 1431 aa38.93■■■■□ 3.82
TPR-202ENST00000451586 KIF13AQ9H1H9 1805 aa38.93■■■■□ 3.82
TPR-202ENST00000451586 WDR7Q9Y4E6 1490 aa38.92■■■■□ 3.82
TPR-202ENST00000451586 DIP2BQ9P265 1576 aa38.91■■■■□ 3.82
TPR-202ENST00000451586 PCF11O94913 1555 aaKnown RBP38.91■■■■□ 3.82
TPR-202ENST00000451586 CDK13Q14004 1512 aaKnown RBP38.88■■■■□ 3.81
TPR-202ENST00000451586 KCNH8Q96L42 1107 aa38.87■■■■□ 3.81
TPR-202ENST00000451586 EPRSP07814 1512 aaKnown RBP38.87■■■■□ 3.81
TPR-202ENST00000451586 FYCO1Q9BQS8 1478 aa38.82■■■■□ 3.81
TPR-202ENST00000451586 PLEKHD1A6NEE1 506 aa38.81■■■■□ 3.8
TPR-202ENST00000451586 LRRIQ1Q96JM4 1722 aa38.8■■■■□ 3.8
TPR-202ENST00000451586 GLI2P10070 1586 aa38.77■■■■□ 3.8
TPR-202ENST00000451586 VPS8Q8N3P4 1428 aa38.71■■■■□ 3.79
TPR-202ENST00000451586 CDK11AQ9UQ88 783 aaPredicted RBP38.7■■■■□ 3.79
TPR-202ENST00000451586 CCDC18Q5T9S5 1454 aa38.7■■■■□ 3.79
TPR-202ENST00000451586 TSPOAP1O95153 1857 aa38.65■■■■□ 3.78
TPR-202ENST00000451586 MAP3K4Q9Y6R4 1608 aa38.6■■■■□ 3.77
TPR-202ENST00000451586 CD109Q6YHK3 1445 aa38.56■■■■□ 3.76
TPR-202ENST00000451586 TROQ12816 1431 aaPredicted RBP38.55■■■■□ 3.76
TPR-202ENST00000451586 CFAP43Q8NDM7 1665 aa38.54■■■■□ 3.76
TPR-202ENST00000451586 ABCA9Q8IUA7 1624 aa38.52■■■■□ 3.76
TPR-202ENST00000451586 MAGI3Q5TCQ9 1506 aa38.52■■■■□ 3.76
TPR-202ENST00000451586 PPRC1Q5VV67 1664 aaKnown RBP38.51■■■■□ 3.76
TPR-202ENST00000451586 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.47■■■■□ 3.75
TPR-202ENST00000451586 KIF14Q15058 1648 aa38.44■■■■□ 3.74
TPR-202ENST00000451586 TTC37Q6PGP7 1564 aa38.4■■■■□ 3.74
TPR-202ENST00000451586 TEX14Q8IWB6 1497 aa38.4■■■■□ 3.74
TPR-202ENST00000451586 MTUS2Q5JR59 1369 aa38.39■■■■□ 3.74
TPR-202ENST00000451586 TIAM1Q13009 1591 aa38.37■■■■□ 3.73
TPR-202ENST00000451586 APLP2Q06481 763 aa38.31■■■■□ 3.72
TPR-202ENST00000451586 MAP3K1Q13233 1512 aa38.3■■■■□ 3.72
TPR-202ENST00000451586 EHBP1L1Q8N3D4 1523 aa38.28■■■■□ 3.72
TPR-202ENST00000451586 PLCH2O75038 1416 aa38.27■■■■□ 3.72
TPR-202ENST00000451586 KANK4Q5T7N3 995 aaPredicted RBP38.26■■■■□ 3.72
TPR-202ENST00000451586 LRRC9Q6ZRR7 1453 aa38.23■■■■□ 3.71
TPR-202ENST00000451586 MYO5CQ9NQX4 1742 aa38.22■■■■□ 3.71
TPR-202ENST00000451586 KDM6BO15054 1643 aa38.22■■■■□ 3.71
TPR-202ENST00000451586 COL17A1Q9UMD9 1497 aaPredicted RBP38.19■■■■□ 3.7
TPR-202ENST00000451586 FANCAO15360 1455 aa38.18■■■■□ 3.7
TPR-202ENST00000451586 NEO1Q92859 1461 aa38.18■■■■□ 3.7
TPR-202ENST00000451586 EFCAB2Q5VUJ9 269 aa38.15■■■■□ 3.7
TPR-202ENST00000451586 PHLDB1Q86UU1 1377 aa38.15■■■■□ 3.7
TPR-202ENST00000451586 AKNAQ7Z591 1439 aa38.12■■■■□ 3.69
TPR-202ENST00000451586 ARAP3Q8WWN8 1544 aa38.12■■■■□ 3.69
TPR-202ENST00000451586 CCNB3Q8WWL7 1395 aa38.12■■■■□ 3.69
TPR-202ENST00000451586 CDC42BPAQ5VT25 1732 aa38.11■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms