RNA–Protein interactions for RNA: ENST00000451091.2

PABPC4-207, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-207ENST00000451091 FAM9AQ8IZU1 332 aaPredicted RBP38.66■■■■□ 3.78
PABPC4-207ENST00000451091 RIMBP3CA6NJZ7 1639 aa38.64■■■■□ 3.78
PABPC4-207ENST00000451091 RIMBP3BA6NNM3 1639 aa38.64■■■■□ 3.78
PABPC4-207ENST00000451091 RIMBP3Q9UFD9 1639 aa38.64■■■■□ 3.78
PABPC4-207ENST00000451091 JPH4Q96JJ6 628 aa38.59■■■■□ 3.77
PABPC4-207ENST00000451091 KIF21BO75037 1637 aa38.58■■■■□ 3.77
PABPC4-207ENST00000451091 IQGAP2Q13576 1575 aa38.53■■■■□ 3.76
PABPC4-207ENST00000451091 CTTNBP2Q8WZ74 1663 aa38.51■■■■□ 3.76
PABPC4-207ENST00000451091 PRG4Q92954 1404 aaPredicted RBP38.46■■■■□ 3.75
PABPC4-207ENST00000451091 ERCC6L2Q5T890 1561 aa38.39■■■■□ 3.74
PABPC4-207ENST00000451091 ARAP1Q96P48 1450 aa38.38■■■■□ 3.73
PABPC4-207ENST00000451091 UGGT2Q9NYU1 1516 aa38.37■■■■□ 3.73
PABPC4-207ENST00000451091 GOLGA3Q08378 1498 aa38.34■■■■□ 3.73
PABPC4-207ENST00000451091 CARMIL2Q6F5E8 1435 aa38.29■■■■□ 3.72
PABPC4-207ENST00000451091 CYB5RLQ6IPT4 315 aa38.26■■■■□ 3.72
PABPC4-207ENST00000451091 DISP1Q96F81 1524 aa38.22■■■■□ 3.71
PABPC4-207ENST00000451091 UBTFP17480 764 aaKnown RBP38.16■■■■□ 3.7
PABPC4-207ENST00000451091 KIAA0556O60303 1618 aa38.14■■■■□ 3.7
PABPC4-207ENST00000451091 TNIKQ9UKE5 1360 aa38.13■■■■□ 3.69
PABPC4-207ENST00000451091 PTPRGP23470 1445 aa38.06■■■■□ 3.68
PABPC4-207ENST00000451091 SAMD9Q5K651 1589 aa38.03■■■■□ 3.68
PABPC4-207ENST00000451091 EHMT2Q96KQ7 1210 aa38.03■■■■□ 3.68
PABPC4-207ENST00000451091 EFCAB5A4FU69 1503 aa37.96■■■■□ 3.67
PABPC4-207ENST00000451091 UHRF1BP1LA0JNW5 1464 aa37.84■■■■□ 3.65
PABPC4-207ENST00000451091 UACAQ9BZF9 1416 aa37.83■■■■□ 3.65
PABPC4-207ENST00000451091 ADCY10Q96PN6 1610 aa37.83■■■■□ 3.65
PABPC4-207ENST00000451091 RANGAP1P46060 587 aaPredicted RBP37.82■■■■□ 3.64
PABPC4-207ENST00000451091 P3H3Q8IVL6 736 aa37.81■■■■□ 3.64
PABPC4-207ENST00000451091 TTBK1Q5TCY1 1321 aaPredicted RBP37.8■■■■□ 3.64
PABPC4-207ENST00000451091 ARHGAP35Q9NRY4 1499 aa37.76■■■■□ 3.63
PABPC4-207ENST00000451091 ABCC2Q92887 1545 aa37.75■■■■□ 3.63
PABPC4-207ENST00000451091 ABCA8O94911 1581 aa37.72■■■■□ 3.63
PABPC4-207ENST00000451091 FHOD3Q2V2M9 1422 aa37.72■■■■□ 3.63
PABPC4-207ENST00000451091 LOC105371045A0A1W2PR82 267 aa37.71■■■■□ 3.63
PABPC4-207ENST00000451091 PLB1Q6P1J6 1458 aa37.7■■■■□ 3.63
PABPC4-207ENST00000451091 NPM1P06748 294 aaKnown RBP eCLIP37.69■■■■□ 3.62
PABPC4-207ENST00000451091 CLIP1P30622 1438 aa37.63■■■■□ 3.61
PABPC4-207ENST00000451091 KDM5BQ9UGL1 1544 aa37.62■■■■□ 3.61
PABPC4-207ENST00000451091 FMN1Q68DA7 1419 aa37.6■■■■□ 3.61
PABPC4-207ENST00000451091 RAPGEF6Q8TEU7 1601 aa37.58■■■■□ 3.61
PABPC4-207ENST00000451091 MAPKBP1O60336 1514 aa37.58■■■■□ 3.61
PABPC4-207ENST00000451091 CEP162Q5TB80 1403 aa37.54■■■■□ 3.6
PABPC4-207ENST00000451091 ZCCHC11Q5TAX3 1644 aaKnown RBP37.5■■■■□ 3.59
PABPC4-207ENST00000451091 NUP153P49790 1475 aaKnown RBP37.43■■■■□ 3.58
PABPC4-207ENST00000451091 ATP10BO94823 1461 aa37.41■■■■□ 3.58
PABPC4-207ENST00000451091 ASXL2Q76L83 1435 aa37.38■■■■□ 3.57
PABPC4-207ENST00000451091 ABCC10Q5T3U5 1492 aa37.34■■■■□ 3.57
PABPC4-207ENST00000451091 TRHP20396 242 aaPredicted RBP37.34■■■■□ 3.57
PABPC4-207ENST00000451091 HECW1Q76N89 1606 aa37.34■■■■□ 3.57
PABPC4-207ENST00000451091 CASKIN1Q8WXD9 1431 aa37.33■■■■□ 3.57
PABPC4-207ENST00000451091 KIF13AQ9H1H9 1805 aa37.27■■■■□ 3.56
PABPC4-207ENST00000451091 WDR7Q9Y4E6 1490 aa37.26■■■■□ 3.56
PABPC4-207ENST00000451091 DIP2BQ9P265 1576 aa37.26■■■■□ 3.56
PABPC4-207ENST00000451091 FYCO1Q9BQS8 1478 aa37.26■■■■□ 3.55
PABPC4-207ENST00000451091 PCF11O94913 1555 aaKnown RBP37.24■■■■□ 3.55
PABPC4-207ENST00000451091 EPRSP07814 1512 aaKnown RBP37.23■■■■□ 3.55
PABPC4-207ENST00000451091 ARID3CA6NKF2 412 aa37.21■■■■□ 3.55
PABPC4-207ENST00000451091 GLI2P10070 1586 aa37.2■■■■□ 3.55
PABPC4-207ENST00000451091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.18■■■■□ 3.54
PABPC4-207ENST00000451091 FAM69CQ0P6D2 419 aa37.18■■■■□ 3.54
PABPC4-207ENST00000451091 HNRNPUL2Q1KMD3 747 aaKnown RBP37.18■■■■□ 3.54
PABPC4-207ENST00000451091 ATP1B4Q9UN42 357 aaPredicted RBP37.18■■■■□ 3.54
PABPC4-207ENST00000451091 CCDC18Q5T9S5 1454 aa37.15■■■■□ 3.54
PABPC4-207ENST00000451091 LRRIQ1Q96JM4 1722 aa37.15■■■■□ 3.54
PABPC4-207ENST00000451091 CDK13Q14004 1512 aaKnown RBP37.15■■■■□ 3.54
PABPC4-207ENST00000451091 PLEKHD1A6NEE1 506 aa37.13■■■■□ 3.53
PABPC4-207ENST00000451091 VPS8Q8N3P4 1428 aa37.1■■■■□ 3.53
PABPC4-207ENST00000451091 CDK11AQ9UQ88 783 aaPredicted RBP37.09■■■■□ 3.53
PABPC4-207ENST00000451091 KCNH8Q96L42 1107 aa37.04■■■■□ 3.52
PABPC4-207ENST00000451091 MAP3K4Q9Y6R4 1608 aa37.01■■■■□ 3.52
PABPC4-207ENST00000451091 CFAP43Q8NDM7 1665 aa36.98■■■■□ 3.51
PABPC4-207ENST00000451091 ABCA9Q8IUA7 1624 aa36.96■■■■□ 3.51
PABPC4-207ENST00000451091 TROQ12816 1431 aaPredicted RBP36.93■■■■□ 3.5
PABPC4-207ENST00000451091 CD109Q6YHK3 1445 aa36.89■■■■□ 3.5
PABPC4-207ENST00000451091 TSPOAP1O95153 1857 aa36.88■■■■□ 3.49
PABPC4-207ENST00000451091 PPRC1Q5VV67 1664 aaKnown RBP36.86■■■■□ 3.49
PABPC4-207ENST00000451091 MAGI3Q5TCQ9 1506 aa36.85■■■■□ 3.49
PABPC4-207ENST00000451091 MAP3K1Q13233 1512 aa36.85■■■■□ 3.49
PABPC4-207ENST00000451091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.84■■■■□ 3.491e-9■■■□□ 16.1
PABPC4-207ENST00000451091 TEX14Q8IWB6 1497 aa36.82■■■■□ 3.48
PABPC4-207ENST00000451091 KIF14Q15058 1648 aa36.81■■■■□ 3.48
PABPC4-207ENST00000451091 TIAM1Q13009 1591 aa36.79■■■■□ 3.48
PABPC4-207ENST00000451091 TTC37Q6PGP7 1564 aa36.74■■■■□ 3.47
PABPC4-207ENST00000451091 MTUS2Q5JR59 1369 aa36.74■■■■□ 3.47
PABPC4-207ENST00000451091 EHBP1L1Q8N3D4 1523 aa36.71■■■■□ 3.47
PABPC4-207ENST00000451091 PHLDB1Q86UU1 1377 aa36.67■■■■□ 3.46
PABPC4-207ENST00000451091 PLCH2O75038 1416 aa36.67■■■■□ 3.46
PABPC4-207ENST00000451091 ARAP3Q8WWN8 1544 aa36.66■■■■□ 3.46
PABPC4-207ENST00000451091 APLP2Q06481 763 aa36.65■■■■□ 3.46
PABPC4-207ENST00000451091 MYO5CQ9NQX4 1742 aa36.65■■■■□ 3.46
PABPC4-207ENST00000451091 LRRC9Q6ZRR7 1453 aa36.63■■■■□ 3.45
PABPC4-207ENST00000451091 NEO1Q92859 1461 aa36.62■■■■□ 3.45
PABPC4-207ENST00000451091 CFAP74Q9C0B2 1584 aa36.58■■■■□ 3.45
PABPC4-207ENST00000451091 FANCAO15360 1455 aa36.56■■■■□ 3.44
PABPC4-207ENST00000451091 KDM6BO15054 1643 aa36.56■■■■□ 3.44
PABPC4-207ENST00000451091 SUPT6HQ7KZ85 1726 aaKnown RBP36.55■■■■□ 3.44
PABPC4-207ENST00000451091 KANK4Q5T7N3 995 aaPredicted RBP36.53■■■■□ 3.44
PABPC4-207ENST00000451091 PREX2Q70Z35 1606 aa36.52■■■■□ 3.44
PABPC4-207ENST00000451091 CDC42BPAQ5VT25 1732 aa36.52■■■■□ 3.44
PABPC4-207ENST00000451091 CDC42BPBQ9Y5S2 1711 aa36.51■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms