RNA–Protein interactions for RNA: ENST00000450865.2

VNN3-210, Transcript of vanin 3, humanhuman

TSL 4 BASIC

Gene VNN3, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-210ENST00000450865 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
VNN3-210ENST00000450865 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
VNN3-210ENST00000450865 EVX2Q03828 476 aa12.21□□□□□ -0.45
VNN3-210ENST00000450865 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
VNN3-210ENST00000450865 LHX8Q68G74 356 aa12.18□□□□□ -0.46
VNN3-210ENST00000450865 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
VNN3-210ENST00000450865 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
VNN3-210ENST00000450865 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
VNN3-210ENST00000450865 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
VNN3-210ENST00000450865 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
VNN3-210ENST00000450865 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
VNN3-210ENST00000450865 LAMC3Q9Y6N6 1575 aa11.99□□□□□ -0.49
VNN3-210ENST00000450865 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
VNN3-210ENST00000450865 NESP48681 1621 aa11.95□□□□□ -0.5
VNN3-210ENST00000450865 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
VNN3-210ENST00000450865 PROM2Q8N271 834 aa11.93□□□□□ -0.5
VNN3-210ENST00000450865 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
VNN3-210ENST00000450865 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
VNN3-210ENST00000450865 CFTRP13569 1480 aa11.89□□□□□ -0.51
VNN3-210ENST00000450865 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
VNN3-210ENST00000450865 GABBR2O75899 941 aa11.87□□□□□ -0.51
VNN3-210ENST00000450865 PDS5BQ9NTI5 1447 aa11.85□□□□□ -0.51
VNN3-210ENST00000450865 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
VNN3-210ENST00000450865 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
VNN3-210ENST00000450865 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
VNN3-210ENST00000450865 CLCN6P51797 869 aa11.81□□□□□ -0.52
VNN3-210ENST00000450865 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
VNN3-210ENST00000450865 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
VNN3-210ENST00000450865 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
VNN3-210ENST00000450865 FKBP8Q14318 412 aa11.77□□□□□ -0.53
VNN3-210ENST00000450865 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
VNN3-210ENST00000450865 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
VNN3-210ENST00000450865 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
VNN3-210ENST00000450865 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
VNN3-210ENST00000450865 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
VNN3-210ENST00000450865 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
VNN3-210ENST00000450865 WDR62O43379 1518 aa11.71□□□□□ -0.53
VNN3-210ENST00000450865 MIER1Q8N108 512 aa11.7□□□□□ -0.54
VNN3-210ENST00000450865 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
VNN3-210ENST00000450865 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
VNN3-210ENST00000450865 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
VNN3-210ENST00000450865 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
VNN3-210ENST00000450865 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
VNN3-210ENST00000450865 CUX1P39880 1505 aa11.65□□□□□ -0.54
VNN3-210ENST00000450865 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
VNN3-210ENST00000450865 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
VNN3-210ENST00000450865 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
VNN3-210ENST00000450865 CUX2O14529 1486 aa11.63□□□□□ -0.55
VNN3-210ENST00000450865 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
VNN3-210ENST00000450865 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
VNN3-210ENST00000450865 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
VNN3-210ENST00000450865 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
VNN3-210ENST00000450865 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
VNN3-210ENST00000450865 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
VNN3-210ENST00000450865 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
VNN3-210ENST00000450865 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
VNN3-210ENST00000450865 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
VNN3-210ENST00000450865 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
VNN3-210ENST00000450865 IFT140Q96RY7 1462 aa11.53□□□□□ -0.56
VNN3-210ENST00000450865 POTEMA6NI47 508 aa11.53□□□□□ -0.56
VNN3-210ENST00000450865 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.57
VNN3-210ENST00000450865 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
VNN3-210ENST00000450865 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
VNN3-210ENST00000450865 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
VNN3-210ENST00000450865 SOGA1O94964 1423 aa11.5□□□□□ -0.57
VNN3-210ENST00000450865 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
VNN3-210ENST00000450865 ABCA5Q8WWZ7 1642 aa11.47□□□□□ -0.57
VNN3-210ENST00000450865 ABCA10Q8WWZ4 1543 aa11.47□□□□□ -0.57
VNN3-210ENST00000450865 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
VNN3-210ENST00000450865 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
VNN3-210ENST00000450865 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
VNN3-210ENST00000450865 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
VNN3-210ENST00000450865 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
VNN3-210ENST00000450865 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
VNN3-210ENST00000450865 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
VNN3-210ENST00000450865 NUBP1P53384 320 aa11.4□□□□□ -0.58
VNN3-210ENST00000450865 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
VNN3-210ENST00000450865 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
VNN3-210ENST00000450865 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
VNN3-210ENST00000450865 CHD1O14646 1710 aa11.38□□□□□ -0.59
VNN3-210ENST00000450865 CUL7Q14999 1698 aa11.37□□□□□ -0.59
VNN3-210ENST00000450865 GRIN2BQ13224 1484 aa11.37□□□□□ -0.59
VNN3-210ENST00000450865 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 MAP3K13O43283 966 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
VNN3-210ENST00000450865 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 ADAMTS12P58397 1594 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
VNN3-210ENST00000450865 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
VNN3-210ENST00000450865 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
VNN3-210ENST00000450865 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
VNN3-210ENST00000450865 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
VNN3-210ENST00000450865 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
VNN3-210ENST00000450865 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
VNN3-210ENST00000450865 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
VNN3-210ENST00000450865 EEA1Q15075 1411 aa11.32□□□□□ -0.6
VNN3-210ENST00000450865 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
VNN3-210ENST00000450865 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
VNN3-210ENST00000450865 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
VNN3-210ENST00000450865 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms