RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
NPHP1-208ENST00000449600 PRR29P0C7W0 189 aa15.35■□□□□ 0.05
NPHP1-208ENST00000449600 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
NPHP1-208ENST00000449600 GABBR2O75899 941 aa15.33■□□□□ 0.04
NPHP1-208ENST00000449600 KIF21AQ7Z4S6 1674 aa15.31■□□□□ 0.04
NPHP1-208ENST00000449600 WDR62O43379 1518 aa15.26■□□□□ 0.03
NPHP1-208ENST00000449600 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
NPHP1-208ENST00000449600 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
NPHP1-208ENST00000449600 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
NPHP1-208ENST00000449600 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
NPHP1-208ENST00000449600 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
NPHP1-208ENST00000449600 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
NPHP1-208ENST00000449600 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
NPHP1-208ENST00000449600 ARHGEF11O15085 1522 aa15.14■□□□□ 0.01
NPHP1-208ENST00000449600 CD44P16070 742 aaKnown RBP15.13■□□□□ 0.01
NPHP1-208ENST00000449600 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
NPHP1-208ENST00000449600 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
NPHP1-208ENST00000449600 POTEIP0CG38 1075 aa15.07■□□□□ 0
NPHP1-208ENST00000449600 LHX8Q68G74 356 aa15.07■□□□□ 0
NPHP1-208ENST00000449600 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
NPHP1-208ENST00000449600 CREBZFQ9NS37 354 aa15□□□□□ -0.01
NPHP1-208ENST00000449600 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
NPHP1-208ENST00000449600 CLCN6P51797 869 aa14.97□□□□□ -0.01
NPHP1-208ENST00000449600 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
NPHP1-208ENST00000449600 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
NPHP1-208ENST00000449600 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
NPHP1-208ENST00000449600 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
NPHP1-208ENST00000449600 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
NPHP1-208ENST00000449600 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
NPHP1-208ENST00000449600 ZRANB1Q9UGI0 708 aa14.86□□□□□ -0.03
NPHP1-208ENST00000449600 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
NPHP1-208ENST00000449600 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
NPHP1-208ENST00000449600 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
NPHP1-208ENST00000449600 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
NPHP1-208ENST00000449600 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
NPHP1-208ENST00000449600 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
NPHP1-208ENST00000449600 CFTRP13569 1480 aa14.78□□□□□ -0.04
NPHP1-208ENST00000449600 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
NPHP1-208ENST00000449600 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
NPHP1-208ENST00000449600 MNX1P50219 401 aaPredicted RBP14.75□□□□□ -0.05
NPHP1-208ENST00000449600 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
NPHP1-208ENST00000449600 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
NPHP1-208ENST00000449600 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
NPHP1-208ENST00000449600 CHD1O14646 1710 aa14.63□□□□□ -0.07
NPHP1-208ENST00000449600 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
NPHP1-208ENST00000449600 PROM2Q8N271 834 aa14.61□□□□□ -0.07
NPHP1-208ENST00000449600 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
NPHP1-208ENST00000449600 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
NPHP1-208ENST00000449600 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPHP1-208ENST00000449600 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
NPHP1-208ENST00000449600 WIZO95785 1651 aa14.52□□□□□ -0.08
NPHP1-208ENST00000449600 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
NPHP1-208ENST00000449600 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
NPHP1-208ENST00000449600 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
NPHP1-208ENST00000449600 MS4A3Q96HJ5 214 aa14.48□□□□□ -0.09
NPHP1-208ENST00000449600 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
NPHP1-208ENST00000449600 ASTLQ6HA08 431 aaPredicted RBP14.45□□□□□ -0.1
NPHP1-208ENST00000449600 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
NPHP1-208ENST00000449600 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
NPHP1-208ENST00000449600 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
NPHP1-208ENST00000449600 SYNJ1O43426 1573 aa14.43□□□□□ -0.1
NPHP1-208ENST00000449600 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
NPHP1-208ENST00000449600 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
NPHP1-208ENST00000449600 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
NPHP1-208ENST00000449600 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
NPHP1-208ENST00000449600 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
NPHP1-208ENST00000449600 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
NPHP1-208ENST00000449600 SNAPC4Q5SXM2 1469 aa14.35□□□□□ -0.11
NPHP1-208ENST00000449600 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
NPHP1-208ENST00000449600 MAGI1Q96QZ7 1491 aaPredicted RBP14.34□□□□□ -0.11
NPHP1-208ENST00000449600 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
NPHP1-208ENST00000449600 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
NPHP1-208ENST00000449600 WDR97A6NE52 1622 aa14.33□□□□□ -0.12
NPHP1-208ENST00000449600 SLC39A7Q92504 469 aa14.32□□□□□ -0.12
NPHP1-208ENST00000449600 C7P10643 843 aa14.3□□□□□ -0.12
NPHP1-208ENST00000449600 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
NPHP1-208ENST00000449600 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
NPHP1-208ENST00000449600 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
NPHP1-208ENST00000449600 KIF13AQ9H1H9 1805 aa14.29□□□□□ -0.12
NPHP1-208ENST00000449600 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
NPHP1-208ENST00000449600 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.13
NPHP1-208ENST00000449600 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
NPHP1-208ENST00000449600 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
NPHP1-208ENST00000449600 PLSCR2Q9NRY7 297 aa14.24□□□□□ -0.13
NPHP1-208ENST00000449600 TRPC6Q9Y210 931 aa14.24□□□□□ -0.13
NPHP1-208ENST00000449600 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
NPHP1-208ENST00000449600 SOGA1O94964 1423 aa14.24□□□□□ -0.13
NPHP1-208ENST00000449600 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
NPHP1-208ENST00000449600 FBXO41Q8TF61 875 aa14.23□□□□□ -0.13
NPHP1-208ENST00000449600 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
NPHP1-208ENST00000449600 POTEMA6NI47 508 aa14.2□□□□□ -0.14
NPHP1-208ENST00000449600 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
NPHP1-208ENST00000449600 ABCC10Q5T3U5 1492 aa14.19□□□□□ -0.14
NPHP1-208ENST00000449600 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
NPHP1-208ENST00000449600 MAP3K13O43283 966 aa14.19□□□□□ -0.14
NPHP1-208ENST00000449600 MIER1Q8N108 512 aa14.19□□□□□ -0.14
NPHP1-208ENST00000449600 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
NPHP1-208ENST00000449600 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
NPHP1-208ENST00000449600 KDM6BO15054 1643 aa14.15□□□□□ -0.14
NPHP1-208ENST00000449600 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms