RNA–Protein interactions for RNA: ENST00000449581.1

LINC01428-201, Transcript of long intergenic non-protein coding RNA 1428, humanhuman

TSL 1 (best) BASIC

Gene LINC01428, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01428-201ENST00000449581 FOXD1Q16676 465 aa18.65■□□□□ 0.58
LINC01428-201ENST00000449581 CUL7Q14999 1698 aa18.61■□□□□ 0.57
LINC01428-201ENST00000449581 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
LINC01428-201ENST00000449581 LRRC9Q6ZRR7 1453 aa18.58■□□□□ 0.57
LINC01428-201ENST00000449581 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.57
LINC01428-201ENST00000449581 IGF1RP08069 1367 aa18.57■□□□□ 0.56
LINC01428-201ENST00000449581 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
LINC01428-201ENST00000449581 SETD5Q9C0A6 1442 aa18.57■□□□□ 0.56
LINC01428-201ENST00000449581 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
LINC01428-201ENST00000449581 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
LINC01428-201ENST00000449581 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
LINC01428-201ENST00000449581 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
LINC01428-201ENST00000449581 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
LINC01428-201ENST00000449581 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
LINC01428-201ENST00000449581 KIF21AQ7Z4S6 1674 aa18.49■□□□□ 0.55
LINC01428-201ENST00000449581 RAB3GAP2Q9H2M9 1393 aa18.48■□□□□ 0.55
LINC01428-201ENST00000449581 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
LINC01428-201ENST00000449581 CASKIN1Q8WXD9 1431 aa18.48■□□□□ 0.55
LINC01428-201ENST00000449581 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
LINC01428-201ENST00000449581 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
LINC01428-201ENST00000449581 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
LINC01428-201ENST00000449581 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
LINC01428-201ENST00000449581 CCER2I3L3R5 266 aa18.37■□□□□ 0.53
LINC01428-201ENST00000449581 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
LINC01428-201ENST00000449581 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
LINC01428-201ENST00000449581 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
LINC01428-201ENST00000449581 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
LINC01428-201ENST00000449581 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
LINC01428-201ENST00000449581 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
LINC01428-201ENST00000449581 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
LINC01428-201ENST00000449581 AKNAQ7Z591 1439 aa18.31■□□□□ 0.52
LINC01428-201ENST00000449581 EHBP1L1Q8N3D4 1523 aa18.3■□□□□ 0.52
LINC01428-201ENST00000449581 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
LINC01428-201ENST00000449581 HFM1A2PYH4 1435 aa18.29■□□□□ 0.52
LINC01428-201ENST00000449581 FGD6Q6ZV73 1430 aa18.29■□□□□ 0.52
LINC01428-201ENST00000449581 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
LINC01428-201ENST00000449581 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
LINC01428-201ENST00000449581 SUPT6HQ7KZ85 1726 aaKnown RBP18.27■□□□□ 0.52
LINC01428-201ENST00000449581 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
LINC01428-201ENST00000449581 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
LINC01428-201ENST00000449581 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
LINC01428-201ENST00000449581 PTPN23Q9H3S7 1636 aa18.2■□□□□ 0.5
LINC01428-201ENST00000449581 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
LINC01428-201ENST00000449581 NEFLP07196 543 aa18.2■□□□□ 0.5
LINC01428-201ENST00000449581 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
LINC01428-201ENST00000449581 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
LINC01428-201ENST00000449581 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
LINC01428-201ENST00000449581 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
LINC01428-201ENST00000449581 FHOD3Q2V2M9 1422 aa18.17■□□□□ 0.5
LINC01428-201ENST00000449581 ANP32CO43423 234 aa18.17■□□□□ 0.5
LINC01428-201ENST00000449581 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
LINC01428-201ENST00000449581 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
LINC01428-201ENST00000449581 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
LINC01428-201ENST00000449581 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
LINC01428-201ENST00000449581 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
LINC01428-201ENST00000449581 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
LINC01428-201ENST00000449581 UGGT2Q9NYU1 1516 aa18.13■□□□□ 0.49
LINC01428-201ENST00000449581 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
LINC01428-201ENST00000449581 ITGAEP38570 1179 aa18.11■□□□□ 0.49
LINC01428-201ENST00000449581 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
LINC01428-201ENST00000449581 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
LINC01428-201ENST00000449581 NESP48681 1621 aa18.09■□□□□ 0.49
LINC01428-201ENST00000449581 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
LINC01428-201ENST00000449581 NAIPQ13075 1403 aa18.07■□□□□ 0.48
LINC01428-201ENST00000449581 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
LINC01428-201ENST00000449581 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
LINC01428-201ENST00000449581 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.48
LINC01428-201ENST00000449581 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
LINC01428-201ENST00000449581 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
LINC01428-201ENST00000449581 ROCK1Q13464 1354 aa18■□□□□ 0.47
LINC01428-201ENST00000449581 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
LINC01428-201ENST00000449581 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
LINC01428-201ENST00000449581 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
LINC01428-201ENST00000449581 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
LINC01428-201ENST00000449581 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
LINC01428-201ENST00000449581 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
LINC01428-201ENST00000449581 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
LINC01428-201ENST00000449581 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
LINC01428-201ENST00000449581 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
LINC01428-201ENST00000449581 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
LINC01428-201ENST00000449581 WDR62O43379 1518 aa17.91■□□□□ 0.46
LINC01428-201ENST00000449581 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
LINC01428-201ENST00000449581 PTPRKQ15262 1439 aa17.89■□□□□ 0.46
LINC01428-201ENST00000449581 FKBP8Q14318 412 aa17.89■□□□□ 0.45
LINC01428-201ENST00000449581 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
LINC01428-201ENST00000449581 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
LINC01428-201ENST00000449581 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
LINC01428-201ENST00000449581 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC01428-201ENST00000449581 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
LINC01428-201ENST00000449581 ITSN2Q9NZM3 1697 aa17.85■□□□□ 0.45
LINC01428-201ENST00000449581 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
LINC01428-201ENST00000449581 RPRD2Q5VT52 1461 aaKnown RBP17.83■□□□□ 0.45
LINC01428-201ENST00000449581 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
LINC01428-201ENST00000449581 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
LINC01428-201ENST00000449581 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
LINC01428-201ENST00000449581 ADGBQ8N7X0 1667 aa17.8■□□□□ 0.44
LINC01428-201ENST00000449581 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
LINC01428-201ENST00000449581 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
LINC01428-201ENST00000449581 KIAA0586Q9BVV6 1533 aa17.78■□□□□ 0.44
LINC01428-201ENST00000449581 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms