RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.18
CCDC171-203ENST00000449575 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
CCDC171-203ENST00000449575 KIAA0586Q9BVV6 1533 aa16.18■□□□□ 0.18
CCDC171-203ENST00000449575 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
CCDC171-203ENST00000449575 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
CCDC171-203ENST00000449575 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
CCDC171-203ENST00000449575 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
CCDC171-203ENST00000449575 IQGAP2Q13576 1575 aa16.16■□□□□ 0.18
CCDC171-203ENST00000449575 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
CCDC171-203ENST00000449575 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
CCDC171-203ENST00000449575 GOLGA3Q08378 1498 aa16.13■□□□□ 0.17
CCDC171-203ENST00000449575 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
CCDC171-203ENST00000449575 UBTFP17480 764 aaKnown RBP16.1■□□□□ 0.17
CCDC171-203ENST00000449575 LOC105371045A0A1W2PR82 267 aa16.09■□□□□ 0.17
CCDC171-203ENST00000449575 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.17
CCDC171-203ENST00000449575 UGGT2Q9NYU1 1516 aa16.05■□□□□ 0.16
CCDC171-203ENST00000449575 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
CCDC171-203ENST00000449575 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
CCDC171-203ENST00000449575 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
CCDC171-203ENST00000449575 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
CCDC171-203ENST00000449575 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
CCDC171-203ENST00000449575 P3H3Q8IVL6 736 aa16■□□□□ 0.15
CCDC171-203ENST00000449575 SAMD9Q5K651 1589 aa15.98■□□□□ 0.15
CCDC171-203ENST00000449575 CARMIL2Q6F5E8 1435 aa15.96■□□□□ 0.15
CCDC171-203ENST00000449575 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
CCDC171-203ENST00000449575 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
CCDC171-203ENST00000449575 FHOD3Q2V2M9 1422 aa15.92■□□□□ 0.14
CCDC171-203ENST00000449575 PTPRGP23470 1445 aa15.91■□□□□ 0.14
CCDC171-203ENST00000449575 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
CCDC171-203ENST00000449575 ADCY10Q96PN6 1610 aa15.87■□□□□ 0.13
CCDC171-203ENST00000449575 CLIP1P30622 1438 aa15.86■□□□□ 0.13
CCDC171-203ENST00000449575 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
CCDC171-203ENST00000449575 PLB1Q6P1J6 1458 aa15.86■□□□□ 0.13
CCDC171-203ENST00000449575 ABCA8O94911 1581 aa15.81■□□□□ 0.12
CCDC171-203ENST00000449575 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
CCDC171-203ENST00000449575 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
CCDC171-203ENST00000449575 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
CCDC171-203ENST00000449575 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
CCDC171-203ENST00000449575 UHRF1BP1LA0JNW5 1464 aa15.76■□□□□ 0.11
CCDC171-203ENST00000449575 LRRIQ1Q96JM4 1722 aa15.75■□□□□ 0.11
CCDC171-203ENST00000449575 ZCCHC11Q5TAX3 1644 aaKnown RBP15.74■□□□□ 0.11
CCDC171-203ENST00000449575 PCF11O94913 1555 aaKnown RBP15.74■□□□□ 0.11
CCDC171-203ENST00000449575 NUP153P49790 1475 aaKnown RBP15.73■□□□□ 0.11
CCDC171-203ENST00000449575 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
CCDC171-203ENST00000449575 KDM5BQ9UGL1 1544 aa15.72■□□□□ 0.11
CCDC171-203ENST00000449575 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
CCDC171-203ENST00000449575 ATP10BO94823 1461 aa15.69■□□□□ 0.1
CCDC171-203ENST00000449575 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
CCDC171-203ENST00000449575 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC171-203ENST00000449575 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
CCDC171-203ENST00000449575 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
CCDC171-203ENST00000449575 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
CCDC171-203ENST00000449575 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
CCDC171-203ENST00000449575 EPRSP07814 1512 aaKnown RBP15.64■□□□□ 0.09
CCDC171-203ENST00000449575 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
CCDC171-203ENST00000449575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
CCDC171-203ENST00000449575 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
CCDC171-203ENST00000449575 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
CCDC171-203ENST00000449575 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
CCDC171-203ENST00000449575 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
CCDC171-203ENST00000449575 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
CCDC171-203ENST00000449575 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.08
CCDC171-203ENST00000449575 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
CCDC171-203ENST00000449575 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
CCDC171-203ENST00000449575 ABCC10Q5T3U5 1492 aa15.56■□□□□ 0.08
CCDC171-203ENST00000449575 TSPOAP1O95153 1857 aa15.55■□□□□ 0.08
CCDC171-203ENST00000449575 CCDC18Q5T9S5 1454 aa15.54■□□□□ 0.08
CCDC171-203ENST00000449575 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
CCDC171-203ENST00000449575 CFAP43Q8NDM7 1665 aa15.53■□□□□ 0.08
CCDC171-203ENST00000449575 KIF14Q15058 1648 aa15.52■□□□□ 0.08
CCDC171-203ENST00000449575 PLEKHD1A6NEE1 506 aa15.52■□□□□ 0.07
CCDC171-203ENST00000449575 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
CCDC171-203ENST00000449575 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
CCDC171-203ENST00000449575 GLI2P10070 1586 aa15.48■□□□□ 0.07
CCDC171-203ENST00000449575 TTC37Q6PGP7 1564 aa15.48■□□□□ 0.07
CCDC171-203ENST00000449575 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
CCDC171-203ENST00000449575 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
CCDC171-203ENST00000449575 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
CCDC171-203ENST00000449575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC171-203ENST00000449575 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
CCDC171-203ENST00000449575 CDK11AQ9UQ88 783 aaPredicted RBP15.46■□□□□ 0.07
CCDC171-203ENST00000449575 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
CCDC171-203ENST00000449575 LRRC9Q6ZRR7 1453 aa15.43■□□□□ 0.06
CCDC171-203ENST00000449575 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
CCDC171-203ENST00000449575 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
CCDC171-203ENST00000449575 EHBP1L1Q8N3D4 1523 aa15.42■□□□□ 0.06
CCDC171-203ENST00000449575 CD109Q6YHK3 1445 aa15.41■□□□□ 0.06
CCDC171-203ENST00000449575 CDC42BPAQ5VT25 1732 aa15.4■□□□□ 0.06
CCDC171-203ENST00000449575 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
CCDC171-203ENST00000449575 APLP2Q06481 763 aa15.39■□□□□ 0.05
CCDC171-203ENST00000449575 CDC42BPBQ9Y5S2 1711 aa15.39■□□□□ 0.05
CCDC171-203ENST00000449575 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
CCDC171-203ENST00000449575 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
CCDC171-203ENST00000449575 PREX2Q70Z35 1606 aa15.34■□□□□ 0.05
CCDC171-203ENST00000449575 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
CCDC171-203ENST00000449575 PLCH2O75038 1416 aa15.33■□□□□ 0.04
CCDC171-203ENST00000449575 HRCP23327 699 aa15.32■□□□□ 0.04
CCDC171-203ENST00000449575 COL17A1Q9UMD9 1497 aaPredicted RBP15.31■□□□□ 0.04
CCDC171-203ENST00000449575 FANCAO15360 1455 aa15.31■□□□□ 0.04
CCDC171-203ENST00000449575 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms