RNA–Protein interactions for RNA: ENST00000449224.1

CRTAP-202, Transcript of cartilage associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRTAP, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-202ENST00000449224 CHMP7Q8WUX9 453 aaPredicted RBP39.4■■■■□ 3.9
CRTAP-202ENST00000449224 FBLN2P98095 1184 aa39.34■■■■□ 3.89
CRTAP-202ENST00000449224 ARHGAP35Q9NRY4 1499 aa39.22■■■■□ 3.87
CRTAP-202ENST00000449224 CEP170Q5SW79 1584 aa39.19■■■■□ 3.86
CRTAP-202ENST00000449224 IQGAP2Q13576 1575 aa39.18■■■■□ 3.86
CRTAP-202ENST00000449224 KIAA0586Q9BVV6 1533 aa39.16■■■■□ 3.86
CRTAP-202ENST00000449224 CHD1O14646 1710 aa39.16■■■■□ 3.86
CRTAP-202ENST00000449224 NUP160Q12769 1436 aa39.16■■■■□ 3.86
CRTAP-202ENST00000449224 ARAP1Q96P48 1450 aa39.14■■■■□ 3.86
CRTAP-202ENST00000449224 EFCAB5A4FU69 1503 aa39.1■■■■□ 3.85
CRTAP-202ENST00000449224 VPS8Q8N3P4 1428 aa39.07■■■■□ 3.84
CRTAP-202ENST00000449224 SAMD9Q5K651 1589 aa39.01■■■■□ 3.84
CRTAP-202ENST00000449224 P3H3Q8IVL6 736 aa39■■■■□ 3.83
CRTAP-202ENST00000449224 UGGT2Q9NYU1 1516 aa38.99■■■■□ 3.83
CRTAP-202ENST00000449224 FHOD3Q2V2M9 1422 aa38.94■■■■□ 3.82
CRTAP-202ENST00000449224 JPH4Q96JJ6 628 aa38.84■■■■□ 3.81
CRTAP-202ENST00000449224 DISP1Q96F81 1524 aa38.82■■■■□ 3.8
CRTAP-202ENST00000449224 KIAA0556O60303 1618 aa38.79■■■■□ 3.8
CRTAP-202ENST00000449224 FMN1Q68DA7 1419 aa38.75■■■■□ 3.79
CRTAP-202ENST00000449224 CLASP1Q7Z460 1538 aa38.73■■■■□ 3.79
CRTAP-202ENST00000449224 CARMIL2Q6F5E8 1435 aa38.69■■■■□ 3.78
CRTAP-202ENST00000449224 SHROOM2Q13796 1616 aa38.67■■■■□ 3.78
CRTAP-202ENST00000449224 PCF11O94913 1555 aaKnown RBP38.67■■■■□ 3.78
CRTAP-202ENST00000449224 APLP2Q06481 763 aa38.66■■■■□ 3.78
CRTAP-202ENST00000449224 PPARGC1BQ86YN6 1023 aaKnown RBP38.65■■■■□ 3.78
CRTAP-202ENST00000449224 PRG4Q92954 1404 aaPredicted RBP38.63■■■■□ 3.77
CRTAP-202ENST00000449224 CASKIN1Q8WXD9 1431 aa38.61■■■■□ 3.77
CRTAP-202ENST00000449224 FYCO1Q9BQS8 1478 aa38.6■■■■□ 3.77
CRTAP-202ENST00000449224 OSCARQ8IYS5 282 aa38.56■■■■□ 3.76
CRTAP-202ENST00000449224 ATP1B4Q9UN42 357 aaPredicted RBP38.53■■■■□ 3.76
CRTAP-202ENST00000449224 TTBK1Q5TCY1 1321 aaPredicted RBP38.51■■■■□ 3.76
CRTAP-202ENST00000449224 MAP3K1Q13233 1512 aa38.45■■■■□ 3.75
CRTAP-202ENST00000449224 TIAM1Q13009 1591 aa38.44■■■■□ 3.74
CRTAP-202ENST00000449224 ERCC6L2Q5T890 1561 aa38.43■■■■□ 3.74
CRTAP-202ENST00000449224 HECW1Q76N89 1606 aa38.39■■■■□ 3.74
CRTAP-202ENST00000449224 CFAP43Q8NDM7 1665 aa38.38■■■■□ 3.73
CRTAP-202ENST00000449224 KANK4Q5T7N3 995 aaPredicted RBP38.37■■■■□ 3.73
CRTAP-202ENST00000449224 RAPGEF6Q8TEU7 1601 aa38.35■■■■□ 3.73
CRTAP-202ENST00000449224 PTPRGP23470 1445 aa38.35■■■■□ 3.73
CRTAP-202ENST00000449224 LRRIQ1Q96JM4 1722 aa38.34■■■■□ 3.73
CRTAP-202ENST00000449224 PLB1Q6P1J6 1458 aa38.33■■■■□ 3.73
CRTAP-202ENST00000449224 TRIM26Q12899 539 aaPredicted RBP38.31■■■■□ 3.72
CRTAP-202ENST00000449224 CCDC18Q5T9S5 1454 aa38.28■■■■□ 3.72
CRTAP-202ENST00000449224 LRRC9Q6ZRR7 1453 aa38.26■■■■□ 3.72
CRTAP-202ENST00000449224 ABCA8O94911 1581 aa38.26■■■■□ 3.72
CRTAP-202ENST00000449224 EPRSP07814 1512 aaKnown RBP38.26■■■■□ 3.72
CRTAP-202ENST00000449224 NUP153P49790 1475 aaKnown RBP38.26■■■■□ 3.71
CRTAP-202ENST00000449224 CDK13Q14004 1512 aaKnown RBP38.19■■■■□ 3.7
CRTAP-202ENST00000449224 ARID3CA6NKF2 412 aa38.17■■■■□ 3.7
CRTAP-202ENST00000449224 PCGF6Q9BYE7 350 aa38.17■■■■□ 3.7
CRTAP-202ENST00000449224 UACAQ9BZF9 1416 aa38.13■■■■□ 3.69
CRTAP-202ENST00000449224 MTUS2Q5JR59 1369 aa38.1■■■■□ 3.69
CRTAP-202ENST00000449224 MAGI3Q5TCQ9 1506 aa38.05■■■■□ 3.68
CRTAP-202ENST00000449224 EHBP1L1Q8N3D4 1523 aa38.04■■■■□ 3.68
CRTAP-202ENST00000449224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.03■■■■□ 3.68
CRTAP-202ENST00000449224 HNRNPUL2Q1KMD3 747 aaKnown RBP38.03■■■■□ 3.68
CRTAP-202ENST00000449224 ABCC2Q92887 1545 aa38.02■■■■□ 3.68
CRTAP-202ENST00000449224 ATP10BO94823 1461 aa38■■■■□ 3.67
CRTAP-202ENST00000449224 CDK11AQ9UQ88 783 aaPredicted RBP37.96■■■■□ 3.67
CRTAP-202ENST00000449224 UHRF1BP1LA0JNW5 1464 aa37.95■■■■□ 3.67
CRTAP-202ENST00000449224 ARHGEF11O15085 1522 aa37.93■■■■□ 3.66
CRTAP-202ENST00000449224 SUPT6HQ7KZ85 1726 aaKnown RBP37.91■■■■□ 3.66
CRTAP-202ENST00000449224 PHLDB1Q86UU1 1377 aa37.88■■■■□ 3.66
CRTAP-202ENST00000449224 NCOA2Q15596 1464 aa37.86■■■■□ 3.65
CRTAP-202ENST00000449224 TROQ12816 1431 aaPredicted RBP37.84■■■■□ 3.65
CRTAP-202ENST00000449224 ADCY10Q96PN6 1610 aa37.83■■■■□ 3.65
CRTAP-202ENST00000449224 RRBP1Q9P2E9 1410 aaKnown RBP37.82■■■■□ 3.64
CRTAP-202ENST00000449224 PLEKHD1A6NEE1 506 aa37.81■■■■□ 3.64
CRTAP-202ENST00000449224 KDM5BQ9UGL1 1544 aa37.8■■■■□ 3.64
CRTAP-202ENST00000449224 ZCCHC11Q5TAX3 1644 aaKnown RBP37.76■■■■□ 3.64
CRTAP-202ENST00000449224 RIMBP3CA6NJZ7 1639 aa37.76■■■■□ 3.63
CRTAP-202ENST00000449224 RIMBP3BA6NNM3 1639 aa37.76■■■■□ 3.63
CRTAP-202ENST00000449224 RIMBP3Q9UFD9 1639 aa37.76■■■■□ 3.63
CRTAP-202ENST00000449224 CCNB3Q8WWL7 1395 aa37.74■■■■□ 3.63
CRTAP-202ENST00000449224 MYOM3Q5VTT5 1437 aa37.69■■■■□ 3.62
CRTAP-202ENST00000449224 KIF14Q15058 1648 aa37.67■■■■□ 3.62
CRTAP-202ENST00000449224 FGD6Q6ZV73 1430 aa37.64■■■■□ 3.62
CRTAP-202ENST00000449224 CYB5RLQ6IPT4 315 aa37.57■■■■□ 3.61
CRTAP-202ENST00000449224 FAM50AQ14320 339 aaKnown RBP37.54■■■■□ 3.6
CRTAP-202ENST00000449224 ABCC10Q5T3U5 1492 aa37.53■■■■□ 3.6
CRTAP-202ENST00000449224 NPM1P06748 294 aaKnown RBP eCLIP37.53■■■■□ 3.6
CRTAP-202ENST00000449224 MIA2Q96PC5 1412 aa37.51■■■■□ 3.6
CRTAP-202ENST00000449224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.51■■■■□ 3.6
CRTAP-202ENST00000449224 PTPN23Q9H3S7 1636 aa37.49■■■■□ 3.59
CRTAP-202ENST00000449224 GPATCH8Q9UKJ3 1502 aaKnown RBP37.48■■■■□ 3.59
CRTAP-202ENST00000449224 ITSN2Q9NZM3 1697 aa37.47■■■■□ 3.59
CRTAP-202ENST00000449224 WDR7Q9Y4E6 1490 aa37.46■■■■□ 3.59
CRTAP-202ENST00000449224 KCNH8Q96L42 1107 aa37.45■■■■□ 3.59
CRTAP-202ENST00000449224 ASXL2Q76L83 1435 aa37.43■■■■□ 3.58
CRTAP-202ENST00000449224 TCOF1Q13428 1488 aaKnown RBP37.43■■■■□ 3.58
CRTAP-202ENST00000449224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.42■■■■□ 3.58
CRTAP-202ENST00000449224 CDC42BPAQ5VT25 1732 aa37.41■■■■□ 3.58
CRTAP-202ENST00000449224 ITGAEP38570 1179 aa37.4■■■■□ 3.58
CRTAP-202ENST00000449224 CFDP1Q9UEE9 299 aaPredicted RBP37.39■■■■□ 3.58
CRTAP-202ENST00000449224 TTC37Q6PGP7 1564 aa37.39■■■■□ 3.58
CRTAP-202ENST00000449224 PREX2Q70Z35 1606 aa37.3■■■■□ 3.56
CRTAP-202ENST00000449224 ZNF644Q9H582 1327 aaPredicted RBP37.28■■■■□ 3.56
CRTAP-202ENST00000449224 CAMSAP2Q08AD1 1489 aa37.27■■■■□ 3.56
CRTAP-202ENST00000449224 MYO5CQ9NQX4 1742 aa37.26■■■■□ 3.56
CRTAP-202ENST00000449224 CDC42BPBQ9Y5S2 1711 aa37.26■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms