RNA–Protein interactions for RNA: ENST00000448638.5

VWA3B-207, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 2

Gene VWA3B, Length 2,516 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-207ENST00000448638 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
VWA3B-207ENST00000448638 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
VWA3B-207ENST00000448638 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
VWA3B-207ENST00000448638 LRRC9Q6ZRR7 1453 aa25.46■■□□□ 1.67
VWA3B-207ENST00000448638 CTTNBP2Q8WZ74 1663 aa25.43■■□□□ 1.66
VWA3B-207ENST00000448638 RAD54L2Q9Y4B4 1467 aa25.43■■□□□ 1.66
VWA3B-207ENST00000448638 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
VWA3B-207ENST00000448638 PCF11O94913 1555 aaKnown RBP25.4■■□□□ 1.66
VWA3B-207ENST00000448638 NESP48681 1621 aa25.38■■□□□ 1.65
VWA3B-207ENST00000448638 AQRO60306 1485 aaKnown RBP eCLIP25.38■■□□□ 1.65
VWA3B-207ENST00000448638 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
VWA3B-207ENST00000448638 MIER1Q8N108 512 aa25.32■■□□□ 1.64
VWA3B-207ENST00000448638 CASKIN1Q8WXD9 1431 aa25.31■■□□□ 1.64
VWA3B-207ENST00000448638 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
VWA3B-207ENST00000448638 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
VWA3B-207ENST00000448638 PHLDB1Q86UU1 1377 aa25.28■■□□□ 1.64
VWA3B-207ENST00000448638 RAB3GAP2Q9H2M9 1393 aa25.28■■□□□ 1.64
VWA3B-207ENST00000448638 GTF3C3Q9Y5Q9 886 aa25.28■■□□□ 1.64
VWA3B-207ENST00000448638 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
VWA3B-207ENST00000448638 FHOD3Q2V2M9 1422 aa25.26■■□□□ 1.63
VWA3B-207ENST00000448638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.24■■□□□ 1.63
VWA3B-207ENST00000448638 FMN1Q68DA7 1419 aa25.23■■□□□ 1.63
VWA3B-207ENST00000448638 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
VWA3B-207ENST00000448638 MAPKBP1O60336 1514 aa25.22■■□□□ 1.63
VWA3B-207ENST00000448638 ITGAEP38570 1179 aa25.2■■□□□ 1.62
VWA3B-207ENST00000448638 SAMD9Q5K651 1589 aa25.2■■□□□ 1.62
VWA3B-207ENST00000448638 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
VWA3B-207ENST00000448638 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
VWA3B-207ENST00000448638 PRKCSHP14314 528 aaPredicted RBP25.15■■□□□ 1.62
VWA3B-207ENST00000448638 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
VWA3B-207ENST00000448638 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
VWA3B-207ENST00000448638 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
VWA3B-207ENST00000448638 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
VWA3B-207ENST00000448638 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
VWA3B-207ENST00000448638 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
VWA3B-207ENST00000448638 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
VWA3B-207ENST00000448638 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
VWA3B-207ENST00000448638 BCL11AQ9H165 835 aa25.04■■□□□ 1.6
VWA3B-207ENST00000448638 TIMELESSQ9UNS1 1208 aa25.04■■□□□ 1.6
VWA3B-207ENST00000448638 LRRIQ1Q96JM4 1722 aa25.04■■□□□ 1.6
VWA3B-207ENST00000448638 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
VWA3B-207ENST00000448638 GRIN2BQ13224 1484 aa25.03■■□□□ 1.6
VWA3B-207ENST00000448638 PBRM1Q86U86 1689 aa24.98■■□□□ 1.59
VWA3B-207ENST00000448638 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
VWA3B-207ENST00000448638 SUPT6HQ7KZ85 1726 aaKnown RBP24.97■■□□□ 1.59
VWA3B-207ENST00000448638 EHBP1L1Q8N3D4 1523 aa24.96■■□□□ 1.59
VWA3B-207ENST00000448638 CCDC18Q5T9S5 1454 aa24.91■■□□□ 1.58
VWA3B-207ENST00000448638 NCOA2Q15596 1464 aa24.91■■□□□ 1.58
VWA3B-207ENST00000448638 MYOM3Q5VTT5 1437 aa24.91■■□□□ 1.58
VWA3B-207ENST00000448638 HFM1A2PYH4 1435 aa24.89■■□□□ 1.57
VWA3B-207ENST00000448638 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
VWA3B-207ENST00000448638 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
VWA3B-207ENST00000448638 PTPN23Q9H3S7 1636 aa24.87■■□□□ 1.57
VWA3B-207ENST00000448638 UGGT2Q9NYU1 1516 aa24.86■■□□□ 1.57
VWA3B-207ENST00000448638 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
VWA3B-207ENST00000448638 IQGAP2Q13576 1575 aa24.85■■□□□ 1.57
VWA3B-207ENST00000448638 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
VWA3B-207ENST00000448638 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
VWA3B-207ENST00000448638 UACAQ9BZF9 1416 aa24.83■■□□□ 1.56
VWA3B-207ENST00000448638 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
VWA3B-207ENST00000448638 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
VWA3B-207ENST00000448638 TCOF1Q13428 1488 aaKnown RBP24.78■■□□□ 1.56
VWA3B-207ENST00000448638 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
VWA3B-207ENST00000448638 NAIPQ13075 1403 aa24.77■■□□□ 1.56
VWA3B-207ENST00000448638 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
VWA3B-207ENST00000448638 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
VWA3B-207ENST00000448638 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
VWA3B-207ENST00000448638 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
VWA3B-207ENST00000448638 WDR62O43379 1518 aa24.71■■□□□ 1.55
VWA3B-207ENST00000448638 AKNAQ7Z591 1439 aa24.71■■□□□ 1.55
VWA3B-207ENST00000448638 MIA2Q96PC5 1412 aa24.68■■□□□ 1.54
VWA3B-207ENST00000448638 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
VWA3B-207ENST00000448638 KIAA0586Q9BVV6 1533 aa24.61■■□□□ 1.53
VWA3B-207ENST00000448638 KIAA0556O60303 1618 aa24.59■■□□□ 1.53
VWA3B-207ENST00000448638 ERICH6Q7L0X2 663 aa24.59■■□□□ 1.53
VWA3B-207ENST00000448638 CDK13Q14004 1512 aaKnown RBP24.59■■□□□ 1.53
VWA3B-207ENST00000448638 DDX10Q13206 875 aaKnown RBP24.58■■□□□ 1.52
VWA3B-207ENST00000448638 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
VWA3B-207ENST00000448638 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
VWA3B-207ENST00000448638 KDM5BQ9UGL1 1544 aa24.54■■□□□ 1.52
VWA3B-207ENST00000448638 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
VWA3B-207ENST00000448638 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
VWA3B-207ENST00000448638 CCER2I3L3R5 266 aa24.51■■□□□ 1.51
VWA3B-207ENST00000448638 RAPGEF6Q8TEU7 1601 aa24.5■■□□□ 1.51
VWA3B-207ENST00000448638 ROCK1Q13464 1354 aa24.47■■□□□ 1.51
VWA3B-207ENST00000448638 DENND4BO75064 1496 aaPredicted RBP24.46■■□□□ 1.51
VWA3B-207ENST00000448638 DNMT1P26358 1616 aaKnown RBP24.46■■□□□ 1.51
VWA3B-207ENST00000448638 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
VWA3B-207ENST00000448638 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
VWA3B-207ENST00000448638 KDM6BO15054 1643 aa24.46■■□□□ 1.51
VWA3B-207ENST00000448638 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.5
VWA3B-207ENST00000448638 KCNH8Q96L42 1107 aa24.45■■□□□ 1.5
VWA3B-207ENST00000448638 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
VWA3B-207ENST00000448638 ANP32CO43423 234 aa24.43■■□□□ 1.5
VWA3B-207ENST00000448638 DAPK1P53355 1430 aa24.42■■□□□ 1.5
VWA3B-207ENST00000448638 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
VWA3B-207ENST00000448638 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.5
VWA3B-207ENST00000448638 HIRIP3Q9BW71 556 aaPredicted RBP24.38■■□□□ 1.49
VWA3B-207ENST00000448638 TRIM52Q96A61 297 aa24.37■■□□□ 1.49
VWA3B-207ENST00000448638 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms