RNA–Protein interactions for RNA: ENST00000448587.5

TINCR-201, Transcript of TINCR ubiquitin domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TINCR, Length 3,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINCR-201ENST00000448587 RAB3GAP2Q9H2M9 1393 aa27.7■■■□□ 2.02
TINCR-201ENST00000448587 FOXD1Q16676 465 aa27.65■■■□□ 2.02
TINCR-201ENST00000448587 FHOD3Q2V2M9 1422 aa27.64■■■□□ 2.02
TINCR-201ENST00000448587 MTUS2Q5JR59 1369 aa27.64■■■□□ 2.01
TINCR-201ENST00000448587 ANP32CO43423 234 aa27.63■■■□□ 2.01
TINCR-201ENST00000448587 IGF1RP08069 1367 aa27.59■■■□□ 2.01
TINCR-201ENST00000448587 TONSLQ96HA7 1378 aa27.57■■■□□ 2
TINCR-201ENST00000448587 RAD54L2Q9Y4B4 1467 aa27.55■■■□□ 2
TINCR-201ENST00000448587 CUX1P39880 1505 aa27.54■■■□□ 2
TINCR-201ENST00000448587 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
TINCR-201ENST00000448587 SUPT16HQ9Y5B9 1047 aaKnown RBP27.5■■□□□ 1.99
TINCR-201ENST00000448587 HNRNPUQ00839 825 aaKnown RBP eCLIP27.46■■□□□ 1.99
TINCR-201ENST00000448587 PHLDB1Q86UU1 1377 aa27.46■■□□□ 1.99
TINCR-201ENST00000448587 ARHGAP35Q9NRY4 1499 aa27.45■■□□□ 1.98
TINCR-201ENST00000448587 FAM9BQ8IZU0 186 aa27.43■■□□□ 1.98
TINCR-201ENST00000448587 NESP48681 1621 aa27.43■■□□□ 1.98
TINCR-201ENST00000448587 PRXQ9BXM0 1461 aa27.42■■□□□ 1.98
TINCR-201ENST00000448587 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
TINCR-201ENST00000448587 SETD5Q9C0A6 1442 aa27.37■■□□□ 1.97
TINCR-201ENST00000448587 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
TINCR-201ENST00000448587 TOP2BQ02880 1626 aa27.36■■□□□ 1.97
TINCR-201ENST00000448587 SALL2Q9Y467 1007 aaPredicted RBP27.29■■□□□ 1.96
TINCR-201ENST00000448587 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
TINCR-201ENST00000448587 CFTRP13569 1480 aa27.27■■□□□ 1.96
TINCR-201ENST00000448587 KDM2AQ9Y2K7 1162 aa27.26■■□□□ 1.95
TINCR-201ENST00000448587 CLSPNQ9HAW4 1339 aa27.26■■□□□ 1.95
TINCR-201ENST00000448587 PPP1R15AO75807 674 aaPredicted RBP27.21■■□□□ 1.95
TINCR-201ENST00000448587 MYT1LQ9UL68 1186 aa27.19■■□□□ 1.94
TINCR-201ENST00000448587 SLC4A1APQ9BWU0 796 aaKnown RBP27.18■■□□□ 1.94
TINCR-201ENST00000448587 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
TINCR-201ENST00000448587 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
TINCR-201ENST00000448587 ERICH6Q7L0X2 663 aa27.12■■□□□ 1.93
TINCR-201ENST00000448587 CHMP7Q8WUX9 453 aaPredicted RBP27.11■■□□□ 1.93
TINCR-201ENST00000448587 ZNF644Q9H582 1327 aaPredicted RBP27.1■■□□□ 1.93
TINCR-201ENST00000448587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.1■■□□□ 1.93
TINCR-201ENST00000448587 MRS2Q9HD23 443 aa27.09■■□□□ 1.93
TINCR-201ENST00000448587 RRBP1Q9P2E9 1410 aaKnown RBP27.08■■□□□ 1.93
TINCR-201ENST00000448587 HSPA5P11021 654 aaKnown RBP27.08■■□□□ 1.93
TINCR-201ENST00000448587 LRRC9Q6ZRR7 1453 aa27.08■■□□□ 1.92
TINCR-201ENST00000448587 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
TINCR-201ENST00000448587 EIF4G2P78344 907 aaKnown RBP eCLIP27.03■■□□□ 1.92
TINCR-201ENST00000448587 SENP3Q9H4L4 574 aaPredicted RBP27.02■■□□□ 1.92
TINCR-201ENST00000448587 RGL3Q3MIN7 710 aa27.01■■□□□ 1.91
TINCR-201ENST00000448587 L3MBTL2Q969R5 705 aa27.01■■□□□ 1.91
TINCR-201ENST00000448587 TSHZ2Q9NRE2 1034 aa26.99■■□□□ 1.91
TINCR-201ENST00000448587 CFDP1Q9UEE9 299 aaPredicted RBP26.97■■□□□ 1.91
TINCR-201ENST00000448587 WDR97A6NE52 1622 aa26.96■■□□□ 1.91
TINCR-201ENST00000448587 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91
TINCR-201ENST00000448587 MPHOSPH9Q99550 1183 aa26.95■■□□□ 1.91
TINCR-201ENST00000448587 CC2D2AQ9P2K1 1620 aa26.95■■□□□ 1.9
TINCR-201ENST00000448587 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
TINCR-201ENST00000448587 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
TINCR-201ENST00000448587 CDK11AQ9UQ88 783 aaPredicted RBP26.91■■□□□ 1.9
TINCR-201ENST00000448587 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
TINCR-201ENST00000448587 CCDC184Q52MB2 194 aa26.89■■□□□ 1.89
TINCR-201ENST00000448587 FMN1Q68DA7 1419 aa26.85■■□□□ 1.89
TINCR-201ENST00000448587 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
TINCR-201ENST00000448587 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
TINCR-201ENST00000448587 B4GALNT3Q6L9W6 998 aa26.84■■□□□ 1.89
TINCR-201ENST00000448587 FGD6Q6ZV73 1430 aa26.84■■□□□ 1.89
TINCR-201ENST00000448587 CCDC18Q5T9S5 1454 aa26.84■■□□□ 1.89
TINCR-201ENST00000448587 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
TINCR-201ENST00000448587 GAPVD1Q14C86 1478 aa26.8■■□□□ 1.88
TINCR-201ENST00000448587 PCF11O94913 1555 aaKnown RBP26.79■■□□□ 1.88
TINCR-201ENST00000448587 PKD2Q13563 968 aa26.75■■□□□ 1.87
TINCR-201ENST00000448587 PTPRKQ15262 1439 aa26.74■■□□□ 1.87
TINCR-201ENST00000448587 MAPKBP1O60336 1514 aa26.72■■□□□ 1.87
TINCR-201ENST00000448587 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
TINCR-201ENST00000448587 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
TINCR-201ENST00000448587 WASHC2AQ641Q2 1341 aa26.71■■□□□ 1.87
TINCR-201ENST00000448587 C11orf95C9JLR9 678 aaPredicted RBP26.7■■□□□ 1.87
TINCR-201ENST00000448587 TMC1Q8TDI8 760 aa26.7■■□□□ 1.87
TINCR-201ENST00000448587 NCOA2Q15596 1464 aa26.7■■□□□ 1.87
TINCR-201ENST00000448587 PLEKHD1A6NEE1 506 aa26.69■■□□□ 1.86
TINCR-201ENST00000448587 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.86
TINCR-201ENST00000448587 RBM19Q9Y4C8 960 aaKnown RBP26.68■■□□□ 1.86
TINCR-201ENST00000448587 DCAF11Q8TEB1 546 aa26.67■■□□□ 1.86
TINCR-201ENST00000448587 CASKIN1Q8WXD9 1431 aa26.67■■□□□ 1.86
TINCR-201ENST00000448587 NBPF8Q3BBV2 869 aa26.66■■□□□ 1.86
TINCR-201ENST00000448587 CARD11Q9BXL7 1154 aa26.66■■□□□ 1.86
TINCR-201ENST00000448587 NPM2Q86SE8 214 aaKnown RBP26.65■■□□□ 1.86
TINCR-201ENST00000448587 CCER2I3L3R5 266 aa26.62■■□□□ 1.85
TINCR-201ENST00000448587 TIMELESSQ9UNS1 1208 aa26.62■■□□□ 1.85
TINCR-201ENST00000448587 MYOM3Q5VTT5 1437 aa26.6■■□□□ 1.85
TINCR-201ENST00000448587 ERCC6Q03468 1493 aa26.6■■□□□ 1.85
TINCR-201ENST00000448587 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
TINCR-201ENST00000448587 URB2Q14146 1524 aaKnown RBP26.58■■□□□ 1.85
TINCR-201ENST00000448587 JPH4Q96JJ6 628 aa26.54■■□□□ 1.84
TINCR-201ENST00000448587 NAIPQ13075 1403 aa26.53■■□□□ 1.84
TINCR-201ENST00000448587 CC2D1BQ5T0F9 858 aaKnown RBP26.53■■□□□ 1.84
TINCR-201ENST00000448587 UACAQ9BZF9 1416 aa26.52■■□□□ 1.84
TINCR-201ENST00000448587 NBR1Q14596 966 aa26.51■■□□□ 1.83
TINCR-201ENST00000448587 FYCO1Q9BQS8 1478 aa26.51■■□□□ 1.83
TINCR-201ENST00000448587 CHGAP10645 457 aaKnown RBP26.5■■□□□ 1.83
TINCR-201ENST00000448587 CCDC136Q96JN2 1154 aa26.5■■□□□ 1.83
TINCR-201ENST00000448587 PRKRIP1Q9H875 184 aaPredicted RBP26.5■■□□□ 1.83
TINCR-201ENST00000448587 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
TINCR-201ENST00000448587 NUP155O75694 1391 aa26.48■■□□□ 1.83
TINCR-201ENST00000448587 MYT1Q01538 1121 aa26.48■■□□□ 1.83
TINCR-201ENST00000448587 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms