RNA–Protein interactions for RNA: ENST00000448511.5

CHEK2-219, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-219ENST00000448511 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
CHEK2-219ENST00000448511 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
CHEK2-219ENST00000448511 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
CHEK2-219ENST00000448511 CHD1O14646 1710 aa17.19■□□□□ 0.34
CHEK2-219ENST00000448511 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
CHEK2-219ENST00000448511 NUP160Q12769 1436 aa17.13■□□□□ 0.33
CHEK2-219ENST00000448511 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
CHEK2-219ENST00000448511 KIF21BO75037 1637 aa17.09■□□□□ 0.33
CHEK2-219ENST00000448511 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
CHEK2-219ENST00000448511 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
CHEK2-219ENST00000448511 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
CHEK2-219ENST00000448511 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
CHEK2-219ENST00000448511 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
CHEK2-219ENST00000448511 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
CHEK2-219ENST00000448511 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
CHEK2-219ENST00000448511 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.3
CHEK2-219ENST00000448511 IQGAP2Q13576 1575 aa16.95■□□□□ 0.3
CHEK2-219ENST00000448511 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
CHEK2-219ENST00000448511 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
CHEK2-219ENST00000448511 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
CHEK2-219ENST00000448511 CTTNBP2Q8WZ74 1663 aa16.92■□□□□ 0.3
CHEK2-219ENST00000448511 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
CHEK2-219ENST00000448511 UGGT2Q9NYU1 1516 aa16.89■□□□□ 0.29
CHEK2-219ENST00000448511 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
CHEK2-219ENST00000448511 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
CHEK2-219ENST00000448511 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
CHEK2-219ENST00000448511 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.28
CHEK2-219ENST00000448511 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
CHEK2-219ENST00000448511 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
CHEK2-219ENST00000448511 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
CHEK2-219ENST00000448511 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
CHEK2-219ENST00000448511 KIAA0556O60303 1618 aa16.79■□□□□ 0.28
CHEK2-219ENST00000448511 ARHGAP35Q9NRY4 1499 aa16.79■□□□□ 0.28
CHEK2-219ENST00000448511 CLIP1P30622 1438 aa16.79■□□□□ 0.28
CHEK2-219ENST00000448511 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
CHEK2-219ENST00000448511 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
CHEK2-219ENST00000448511 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
CHEK2-219ENST00000448511 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
CHEK2-219ENST00000448511 FHOD3Q2V2M9 1422 aa16.77■□□□□ 0.28
CHEK2-219ENST00000448511 PTPRGP23470 1445 aa16.76■□□□□ 0.27
CHEK2-219ENST00000448511 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
CHEK2-219ENST00000448511 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
CHEK2-219ENST00000448511 UACAQ9BZF9 1416 aa16.64■□□□□ 0.26
CHEK2-219ENST00000448511 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
CHEK2-219ENST00000448511 ARID3CA6NKF2 412 aa16.6■□□□□ 0.25
CHEK2-219ENST00000448511 ABCA8O94911 1581 aa16.6■□□□□ 0.25
CHEK2-219ENST00000448511 ATP1B4Q9UN42 357 aaPredicted RBP16.59■□□□□ 0.25
CHEK2-219ENST00000448511 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
CHEK2-219ENST00000448511 ADCY10Q96PN6 1610 aa16.58■□□□□ 0.25
CHEK2-219ENST00000448511 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
CHEK2-219ENST00000448511 RAPGEF6Q8TEU7 1601 aa16.55■□□□□ 0.24
CHEK2-219ENST00000448511 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
CHEK2-219ENST00000448511 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
CHEK2-219ENST00000448511 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
CHEK2-219ENST00000448511 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHEK2-219ENST00000448511 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
CHEK2-219ENST00000448511 KDM5BQ9UGL1 1544 aa16.52■□□□□ 0.23
CHEK2-219ENST00000448511 ATP10BO94823 1461 aa16.51■□□□□ 0.23
CHEK2-219ENST00000448511 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
CHEK2-219ENST00000448511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
CHEK2-219ENST00000448511 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
CHEK2-219ENST00000448511 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
CHEK2-219ENST00000448511 CDK13Q14004 1512 aaKnown RBP16.48■□□□□ 0.23
CHEK2-219ENST00000448511 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
CHEK2-219ENST00000448511 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
CHEK2-219ENST00000448511 ZCCHC11Q5TAX3 1644 aaKnown RBP16.45■□□□□ 0.22
CHEK2-219ENST00000448511 ASXL2Q76L83 1435 aa16.43■□□□□ 0.22
CHEK2-219ENST00000448511 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
CHEK2-219ENST00000448511 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
CHEK2-219ENST00000448511 PLEKHD1A6NEE1 506 aa16.41■□□□□ 0.22
CHEK2-219ENST00000448511 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
CHEK2-219ENST00000448511 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
CHEK2-219ENST00000448511 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
CHEK2-219ENST00000448511 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
CHEK2-219ENST00000448511 WDR7Q9Y4E6 1490 aa16.38■□□□□ 0.21
CHEK2-219ENST00000448511 APLP2Q06481 763 aa16.36■□□□□ 0.21
CHEK2-219ENST00000448511 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
CHEK2-219ENST00000448511 MAGI3Q5TCQ9 1506 aa16.36■□□□□ 0.21
CHEK2-219ENST00000448511 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
CHEK2-219ENST00000448511 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
CHEK2-219ENST00000448511 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
CHEK2-219ENST00000448511 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
CHEK2-219ENST00000448511 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
CHEK2-219ENST00000448511 ABCC10Q5T3U5 1492 aa16.32■□□□□ 0.2
CHEK2-219ENST00000448511 MAP3K1Q13233 1512 aa16.31■□□□□ 0.2
CHEK2-219ENST00000448511 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
CHEK2-219ENST00000448511 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
CHEK2-219ENST00000448511 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
CHEK2-219ENST00000448511 DIP2BQ9P265 1576 aa16.27■□□□□ 0.2
CHEK2-219ENST00000448511 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
CHEK2-219ENST00000448511 KIF14Q15058 1648 aa16.26■□□□□ 0.19
CHEK2-219ENST00000448511 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
CHEK2-219ENST00000448511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHEK2-219ENST00000448511 GLI2P10070 1586 aa16.23■□□□□ 0.19
CHEK2-219ENST00000448511 CD109Q6YHK3 1445 aa16.21■□□□□ 0.19
CHEK2-219ENST00000448511 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
CHEK2-219ENST00000448511 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
CHEK2-219ENST00000448511 KIF13AQ9H1H9 1805 aa16.2■□□□□ 0.18
CHEK2-219ENST00000448511 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
CHEK2-219ENST00000448511 CCNB3Q8WWL7 1395 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms