RNA–Protein interactions for RNA: ENST00000445399.5

TGFA-206, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-206ENST00000445399 KIAA0586Q9BVV6 1533 aa21.76■■□□□ 1.07
TGFA-206ENST00000445399 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
TGFA-206ENST00000445399 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
TGFA-206ENST00000445399 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
TGFA-206ENST00000445399 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
TGFA-206ENST00000445399 IQGAP2Q13576 1575 aa21.65■■□□□ 1.06
TGFA-206ENST00000445399 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
TGFA-206ENST00000445399 CTTNBP2Q8WZ74 1663 aa21.63■■□□□ 1.05
TGFA-206ENST00000445399 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
TGFA-206ENST00000445399 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
TGFA-206ENST00000445399 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
TGFA-206ENST00000445399 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
TGFA-206ENST00000445399 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
TGFA-206ENST00000445399 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
TGFA-206ENST00000445399 UGGT2Q9NYU1 1516 aa21.57■■□□□ 1.04
TGFA-206ENST00000445399 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
TGFA-206ENST00000445399 DISP1Q96F81 1524 aa21.54■■□□□ 1.04
TGFA-206ENST00000445399 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
TGFA-206ENST00000445399 CARMIL2Q6F5E8 1435 aa21.5■■□□□ 1.03
TGFA-206ENST00000445399 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
TGFA-206ENST00000445399 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
TGFA-206ENST00000445399 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
TGFA-206ENST00000445399 KIAA0556O60303 1618 aa21.45■■□□□ 1.02
TGFA-206ENST00000445399 SAMD9Q5K651 1589 aa21.42■■□□□ 1.02
TGFA-206ENST00000445399 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
TGFA-206ENST00000445399 PTPRGP23470 1445 aa21.41■■□□□ 1.02
TGFA-206ENST00000445399 ARHGAP35Q9NRY4 1499 aa21.38■■□□□ 1.01
TGFA-206ENST00000445399 EFCAB5A4FU69 1503 aa21.37■■□□□ 1.01
TGFA-206ENST00000445399 FHOD3Q2V2M9 1422 aa21.37■■□□□ 1.01
TGFA-206ENST00000445399 CLIP1P30622 1438 aa21.35■■□□□ 1.01
TGFA-206ENST00000445399 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
TGFA-206ENST00000445399 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
TGFA-206ENST00000445399 UACAQ9BZF9 1416 aa21.27■■□□□ 1
TGFA-206ENST00000445399 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
TGFA-206ENST00000445399 ABCA8O94911 1581 aa21.22■□□□□ 0.99
TGFA-206ENST00000445399 ADCY10Q96PN6 1610 aa21.22■□□□□ 0.99
TGFA-206ENST00000445399 UHRF1BP1LA0JNW5 1464 aa21.21■□□□□ 0.99
TGFA-206ENST00000445399 FMN1Q68DA7 1419 aa21.2■□□□□ 0.98
TGFA-206ENST00000445399 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
TGFA-206ENST00000445399 RAPGEF6Q8TEU7 1601 aa21.15■□□□□ 0.98
TGFA-206ENST00000445399 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.97
TGFA-206ENST00000445399 ARID3CA6NKF2 412 aa21.12■□□□□ 0.97
TGFA-206ENST00000445399 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
TGFA-206ENST00000445399 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
TGFA-206ENST00000445399 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
TGFA-206ENST00000445399 ATP10BO94823 1461 aa21.08■□□□□ 0.97
TGFA-206ENST00000445399 CASKIN1Q8WXD9 1431 aa21.08■□□□□ 0.97
TGFA-206ENST00000445399 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
TGFA-206ENST00000445399 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
TGFA-206ENST00000445399 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
TGFA-206ENST00000445399 FYCO1Q9BQS8 1478 aa21.02■□□□□ 0.96
TGFA-206ENST00000445399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
TGFA-206ENST00000445399 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
TGFA-206ENST00000445399 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
TGFA-206ENST00000445399 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
TGFA-206ENST00000445399 MAPKBP1O60336 1514 aa21■□□□□ 0.95
TGFA-206ENST00000445399 CDK13Q14004 1512 aaKnown RBP21■□□□□ 0.95
TGFA-206ENST00000445399 ASXL2Q76L83 1435 aa21■□□□□ 0.95
TGFA-206ENST00000445399 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
TGFA-206ENST00000445399 PLEKHD1A6NEE1 506 aa20.93■□□□□ 0.94
TGFA-206ENST00000445399 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
TGFA-206ENST00000445399 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
TGFA-206ENST00000445399 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
TGFA-206ENST00000445399 TRHP20396 242 aaPredicted RBP20.9■□□□□ 0.94
TGFA-206ENST00000445399 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.94
TGFA-206ENST00000445399 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
TGFA-206ENST00000445399 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
TGFA-206ENST00000445399 DIP2BQ9P265 1576 aa20.85■□□□□ 0.93
TGFA-206ENST00000445399 MAGI3Q5TCQ9 1506 aa20.84■□□□□ 0.93
TGFA-206ENST00000445399 TROQ12816 1431 aaPredicted RBP20.83■□□□□ 0.93
TGFA-206ENST00000445399 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
TGFA-206ENST00000445399 MAP3K1Q13233 1512 aa20.8■□□□□ 0.92
TGFA-206ENST00000445399 KANK4Q5T7N3 995 aaPredicted RBP20.8■□□□□ 0.92
TGFA-206ENST00000445399 GLI2P10070 1586 aa20.8■□□□□ 0.92
TGFA-206ENST00000445399 KIF13AQ9H1H9 1805 aa20.79■□□□□ 0.92
TGFA-206ENST00000445399 APLP2Q06481 763 aa20.79■□□□□ 0.92
TGFA-206ENST00000445399 MTUS2Q5JR59 1369 aa20.78■□□□□ 0.92
TGFA-206ENST00000445399 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
TGFA-206ENST00000445399 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
TGFA-206ENST00000445399 KIF14Q15058 1648 aa20.74■□□□□ 0.91
TGFA-206ENST00000445399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
TGFA-206ENST00000445399 CD109Q6YHK3 1445 aa20.72■□□□□ 0.91
TGFA-206ENST00000445399 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
TGFA-206ENST00000445399 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
TGFA-206ENST00000445399 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
TGFA-206ENST00000445399 TTC37Q6PGP7 1564 aa20.69■□□□□ 0.9
TGFA-206ENST00000445399 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
TGFA-206ENST00000445399 TSPOAP1O95153 1857 aa20.64■□□□□ 0.89
TGFA-206ENST00000445399 PPRC1Q5VV67 1664 aaKnown RBP20.64■□□□□ 0.89
TGFA-206ENST00000445399 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
TGFA-206ENST00000445399 PLCH2O75038 1416 aa20.63■□□□□ 0.89
TGFA-206ENST00000445399 SUPT6HQ7KZ85 1726 aaKnown RBP20.61■□□□□ 0.89
TGFA-206ENST00000445399 CCNB3Q8WWL7 1395 aa20.6■□□□□ 0.89
TGFA-206ENST00000445399 GPATCH8Q9UKJ3 1502 aaKnown RBP20.6■□□□□ 0.89
TGFA-206ENST00000445399 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
TGFA-206ENST00000445399 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
TGFA-206ENST00000445399 FANCAO15360 1455 aa20.56■□□□□ 0.88
TGFA-206ENST00000445399 MYO5CQ9NQX4 1742 aa20.56■□□□□ 0.88
TGFA-206ENST00000445399 ARAP3Q8WWN8 1544 aa20.55■□□□□ 0.88
TGFA-206ENST00000445399 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms