RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 KIAA0586Q9BVV6 1533 aa13.63□□□□□ -0.23
BRAFP1-201ENST00000445336 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
BRAFP1-201ENST00000445336 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
BRAFP1-201ENST00000445336 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
BRAFP1-201ENST00000445336 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
BRAFP1-201ENST00000445336 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
BRAFP1-201ENST00000445336 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
BRAFP1-201ENST00000445336 PTPRMP28827 1452 aa13.51□□□□□ -0.25
BRAFP1-201ENST00000445336 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
BRAFP1-201ENST00000445336 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
BRAFP1-201ENST00000445336 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
BRAFP1-201ENST00000445336 SOGA1O94964 1423 aa13.49□□□□□ -0.25
BRAFP1-201ENST00000445336 PLB1Q6P1J6 1458 aa13.47□□□□□ -0.25
BRAFP1-201ENST00000445336 WIZO95785 1651 aa13.47□□□□□ -0.25
BRAFP1-201ENST00000445336 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
BRAFP1-201ENST00000445336 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
BRAFP1-201ENST00000445336 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
BRAFP1-201ENST00000445336 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
BRAFP1-201ENST00000445336 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
BRAFP1-201ENST00000445336 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
BRAFP1-201ENST00000445336 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
BRAFP1-201ENST00000445336 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
BRAFP1-201ENST00000445336 KIF21BO75037 1637 aa13.34□□□□□ -0.27
BRAFP1-201ENST00000445336 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
BRAFP1-201ENST00000445336 PTPRTO14522 1441 aa13.33□□□□□ -0.28
BRAFP1-201ENST00000445336 CFAP43Q8NDM7 1665 aa13.29□□□□□ -0.28
BRAFP1-201ENST00000445336 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
BRAFP1-201ENST00000445336 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
BRAFP1-201ENST00000445336 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
BRAFP1-201ENST00000445336 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
BRAFP1-201ENST00000445336 ABCC2Q92887 1545 aa13.27□□□□□ -0.29
BRAFP1-201ENST00000445336 LTBP4Q8N2S1 1624 aa13.26□□□□□ -0.29
BRAFP1-201ENST00000445336 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
BRAFP1-201ENST00000445336 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
BRAFP1-201ENST00000445336 YEATS2Q9ULM3 1422 aa13.23□□□□□ -0.29
BRAFP1-201ENST00000445336 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
BRAFP1-201ENST00000445336 MADDQ8WXG6 1647 aa13.22□□□□□ -0.29
BRAFP1-201ENST00000445336 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
BRAFP1-201ENST00000445336 PREX1Q8TCU6 1659 aa13.22□□□□□ -0.29
BRAFP1-201ENST00000445336 ASXL2Q76L83 1435 aa13.21□□□□□ -0.29
BRAFP1-201ENST00000445336 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.3
BRAFP1-201ENST00000445336 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
BRAFP1-201ENST00000445336 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
BRAFP1-201ENST00000445336 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
BRAFP1-201ENST00000445336 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
BRAFP1-201ENST00000445336 TTC37Q6PGP7 1564 aa13.12□□□□□ -0.31
BRAFP1-201ENST00000445336 CUL7Q14999 1698 aa13.11□□□□□ -0.31
BRAFP1-201ENST00000445336 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
BRAFP1-201ENST00000445336 KDM5BQ9UGL1 1544 aa13.09□□□□□ -0.31
BRAFP1-201ENST00000445336 CUX1P39880 1505 aa13.07□□□□□ -0.32
BRAFP1-201ENST00000445336 POGZQ7Z3K3 1410 aa13.02□□□□□ -0.33
BRAFP1-201ENST00000445336 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
BRAFP1-201ENST00000445336 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
BRAFP1-201ENST00000445336 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
BRAFP1-201ENST00000445336 PTPRGP23470 1445 aa12.96□□□□□ -0.33
BRAFP1-201ENST00000445336 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
BRAFP1-201ENST00000445336 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
BRAFP1-201ENST00000445336 HSPA2P54652 639 aa12.95□□□□□ -0.34
BRAFP1-201ENST00000445336 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
BRAFP1-201ENST00000445336 FANCAO15360 1455 aa12.94□□□□□ -0.34
BRAFP1-201ENST00000445336 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
BRAFP1-201ENST00000445336 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
BRAFP1-201ENST00000445336 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
BRAFP1-201ENST00000445336 UACAQ9BZF9 1416 aa12.92□□□□□ -0.34
BRAFP1-201ENST00000445336 NEO1Q92859 1461 aa12.9□□□□□ -0.34
BRAFP1-201ENST00000445336 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
BRAFP1-201ENST00000445336 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
BRAFP1-201ENST00000445336 ARHGEF12Q9NZN5 1544 aa12.85□□□□□ -0.35
BRAFP1-201ENST00000445336 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
BRAFP1-201ENST00000445336 UBAP1LF5GYI3 381 aa12.85□□□□□ -0.35
BRAFP1-201ENST00000445336 NCOA1Q15788 1441 aa12.84□□□□□ -0.35
BRAFP1-201ENST00000445336 ZMYM4Q5VZL5 1548 aa12.84□□□□□ -0.35
BRAFP1-201ENST00000445336 CPS1P31327 1500 aa12.83□□□□□ -0.36
BRAFP1-201ENST00000445336 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
BRAFP1-201ENST00000445336 MAGI2Q86UL8 1455 aa12.81□□□□□ -0.36
BRAFP1-201ENST00000445336 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
BRAFP1-201ENST00000445336 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
BRAFP1-201ENST00000445336 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
BRAFP1-201ENST00000445336 HSPA1LP34931 641 aa12.78□□□□□ -0.36
BRAFP1-201ENST00000445336 FOXD1Q16676 465 aa12.78□□□□□ -0.36
BRAFP1-201ENST00000445336 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
BRAFP1-201ENST00000445336 ABCA9Q8IUA7 1624 aa12.76□□□□□ -0.37
BRAFP1-201ENST00000445336 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
BRAFP1-201ENST00000445336 TOM1O60784 492 aa12.74□□□□□ -0.37
BRAFP1-201ENST00000445336 PLA2R1Q13018 1463 aa12.74□□□□□ -0.37
BRAFP1-201ENST00000445336 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
BRAFP1-201ENST00000445336 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
BRAFP1-201ENST00000445336 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
BRAFP1-201ENST00000445336 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
BRAFP1-201ENST00000445336 CDK12Q9NYV4 1490 aaPredicted RBP12.68□□□□□ -0.38
BRAFP1-201ENST00000445336 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
BRAFP1-201ENST00000445336 LRP5O75197 1615 aa12.67□□□□□ -0.38
BRAFP1-201ENST00000445336 ARID4BQ4LE39 1312 aaPredicted RBP12.67□□□□□ -0.38
BRAFP1-201ENST00000445336 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
BRAFP1-201ENST00000445336 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
BRAFP1-201ENST00000445336 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
BRAFP1-201ENST00000445336 PKD2Q13563 968 aa12.64□□□□□ -0.39
BRAFP1-201ENST00000445336 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
BRAFP1-201ENST00000445336 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
BRAFP1-201ENST00000445336 NPATQ14207 1427 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms