RNA–Protein interactions for RNA: ENST00000443213.5

SRSF7-208, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 5

Gene SRSF7, Length 1,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-208ENST00000443213 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
SRSF7-208ENST00000443213 FBLN2P98095 1184 aa17.35■□□□□ 0.37
SRSF7-208ENST00000443213 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
SRSF7-208ENST00000443213 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.37
SRSF7-208ENST00000443213 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
SRSF7-208ENST00000443213 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
SRSF7-208ENST00000443213 CUL7Q14999 1698 aa17.3■□□□□ 0.36
SRSF7-208ENST00000443213 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
SRSF7-208ENST00000443213 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
SRSF7-208ENST00000443213 KIF21BO75037 1637 aa17.25■□□□□ 0.35
SRSF7-208ENST00000443213 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
SRSF7-208ENST00000443213 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
SRSF7-208ENST00000443213 CEP170Q5SW79 1584 aa17.21■□□□□ 0.34
SRSF7-208ENST00000443213 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
SRSF7-208ENST00000443213 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
SRSF7-208ENST00000443213 NUP160Q12769 1436 aa17.14■□□□□ 0.34
SRSF7-208ENST00000443213 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
SRSF7-208ENST00000443213 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
SRSF7-208ENST00000443213 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
SRSF7-208ENST00000443213 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
SRSF7-208ENST00000443213 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
SRSF7-208ENST00000443213 KIAA0586Q9BVV6 1533 aa17.09■□□□□ 0.33
SRSF7-208ENST00000443213 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
SRSF7-208ENST00000443213 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
SRSF7-208ENST00000443213 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
SRSF7-208ENST00000443213 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.31
SRSF7-208ENST00000443213 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
SRSF7-208ENST00000443213 CEP162Q5TB80 1403 aa17■□□□□ 0.31
SRSF7-208ENST00000443213 CLIP1P30622 1438 aa16.98■□□□□ 0.31
SRSF7-208ENST00000443213 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
SRSF7-208ENST00000443213 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
SRSF7-208ENST00000443213 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
SRSF7-208ENST00000443213 PRG4Q92954 1404 aaPredicted RBP16.94■□□□□ 0.3
SRSF7-208ENST00000443213 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
SRSF7-208ENST00000443213 ARHGAP35Q9NRY4 1499 aa16.92■□□□□ 0.3
SRSF7-208ENST00000443213 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
SRSF7-208ENST00000443213 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
SRSF7-208ENST00000443213 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
SRSF7-208ENST00000443213 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
SRSF7-208ENST00000443213 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
SRSF7-208ENST00000443213 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
SRSF7-208ENST00000443213 TTBK1Q5TCY1 1321 aaPredicted RBP16.89■□□□□ 0.29
SRSF7-208ENST00000443213 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
SRSF7-208ENST00000443213 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
SRSF7-208ENST00000443213 KIAA0556O60303 1618 aa16.87■□□□□ 0.29
SRSF7-208ENST00000443213 EFCAB5A4FU69 1503 aa16.87■□□□□ 0.29
SRSF7-208ENST00000443213 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
SRSF7-208ENST00000443213 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
SRSF7-208ENST00000443213 PTPRGP23470 1445 aa16.8■□□□□ 0.28
SRSF7-208ENST00000443213 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
SRSF7-208ENST00000443213 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
SRSF7-208ENST00000443213 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
SRSF7-208ENST00000443213 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
SRSF7-208ENST00000443213 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
SRSF7-208ENST00000443213 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
SRSF7-208ENST00000443213 ADCY10Q96PN6 1610 aa16.69■□□□□ 0.26
SRSF7-208ENST00000443213 ARID3CA6NKF2 412 aa16.68■□□□□ 0.26
SRSF7-208ENST00000443213 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
SRSF7-208ENST00000443213 UACAQ9BZF9 1416 aa16.68■□□□□ 0.26
SRSF7-208ENST00000443213 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
SRSF7-208ENST00000443213 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
SRSF7-208ENST00000443213 ABCA8O94911 1581 aa16.67■□□□□ 0.26
SRSF7-208ENST00000443213 PCF11O94913 1555 aaKnown RBP16.65■□□□□ 0.26
SRSF7-208ENST00000443213 FYCO1Q9BQS8 1478 aa16.64■□□□□ 0.25
SRSF7-208ENST00000443213 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
SRSF7-208ENST00000443213 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SRSF7-208ENST00000443213 APLP2Q06481 763 aa16.62■□□□□ 0.25
SRSF7-208ENST00000443213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
SRSF7-208ENST00000443213 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
SRSF7-208ENST00000443213 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
SRSF7-208ENST00000443213 ABCC2Q92887 1545 aa16.61■□□□□ 0.25
SRSF7-208ENST00000443213 UHRF1BP1LA0JNW5 1464 aa16.6■□□□□ 0.25
SRSF7-208ENST00000443213 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
SRSF7-208ENST00000443213 HECW1Q76N89 1606 aa16.58■□□□□ 0.24
SRSF7-208ENST00000443213 ATP10BO94823 1461 aa16.57■□□□□ 0.24
SRSF7-208ENST00000443213 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
SRSF7-208ENST00000443213 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
SRSF7-208ENST00000443213 CDK13Q14004 1512 aaKnown RBP16.56■□□□□ 0.24
SRSF7-208ENST00000443213 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
SRSF7-208ENST00000443213 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
SRSF7-208ENST00000443213 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
SRSF7-208ENST00000443213 KDM5BQ9UGL1 1544 aa16.54■□□□□ 0.24
SRSF7-208ENST00000443213 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SRSF7-208ENST00000443213 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
SRSF7-208ENST00000443213 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
SRSF7-208ENST00000443213 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
SRSF7-208ENST00000443213 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
SRSF7-208ENST00000443213 MTUS2Q5JR59 1369 aa16.48■□□□□ 0.23
SRSF7-208ENST00000443213 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
SRSF7-208ENST00000443213 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
SRSF7-208ENST00000443213 ASXL2Q76L83 1435 aa16.44■□□□□ 0.22
SRSF7-208ENST00000443213 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
SRSF7-208ENST00000443213 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
SRSF7-208ENST00000443213 TROQ12816 1431 aaPredicted RBP16.42■□□□□ 0.22
SRSF7-208ENST00000443213 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
SRSF7-208ENST00000443213 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
SRSF7-208ENST00000443213 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
SRSF7-208ENST00000443213 KIF14Q15058 1648 aa16.39■□□□□ 0.21
SRSF7-208ENST00000443213 EHBP1L1Q8N3D4 1523 aa16.38■□□□□ 0.21
SRSF7-208ENST00000443213 DIP2BQ9P265 1576 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms