RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
SP140-206ENST00000441657 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
SP140-206ENST00000441657 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
SP140-206ENST00000441657 DIP2BQ9P265 1576 aa11.94□□□□□ -0.5
SP140-206ENST00000441657 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
SP140-206ENST00000441657 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
SP140-206ENST00000441657 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
SP140-206ENST00000441657 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
SP140-206ENST00000441657 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
SP140-206ENST00000441657 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
SP140-206ENST00000441657 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
SP140-206ENST00000441657 NUP160Q12769 1436 aa11.8□□□□□ -0.52
SP140-206ENST00000441657 FGD5Q6ZNL6 1462 aa11.8□□□□□ -0.52
SP140-206ENST00000441657 PBRM1Q86U86 1689 aa11.79□□□□□ -0.52
SP140-206ENST00000441657 GRIN2AQ12879 1464 aa11.79□□□□□ -0.52
SP140-206ENST00000441657 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
SP140-206ENST00000441657 SPATA31D1Q6ZQQ2 1576 aa11.79□□□□□ -0.52
SP140-206ENST00000441657 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
SP140-206ENST00000441657 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
SP140-206ENST00000441657 COL17A1Q9UMD9 1497 aaPredicted RBP11.74□□□□□ -0.53
SP140-206ENST00000441657 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
SP140-206ENST00000441657 ADCY10Q96PN6 1610 aa11.72□□□□□ -0.53
SP140-206ENST00000441657 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
SP140-206ENST00000441657 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
SP140-206ENST00000441657 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
SP140-206ENST00000441657 GLI2P10070 1586 aa11.66□□□□□ -0.54
SP140-206ENST00000441657 CUX1P39880 1505 aa11.64□□□□□ -0.55
SP140-206ENST00000441657 ADAMTS12P58397 1594 aa11.63□□□□□ -0.55
SP140-206ENST00000441657 ABCA10Q8WWZ4 1543 aa11.63□□□□□ -0.55
SP140-206ENST00000441657 PCF11O94913 1555 aaKnown RBP11.62□□□□□ -0.55
SP140-206ENST00000441657 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
SP140-206ENST00000441657 PTPRMP28827 1452 aa11.61□□□□□ -0.55
SP140-206ENST00000441657 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
SP140-206ENST00000441657 PLB1Q6P1J6 1458 aa11.6□□□□□ -0.55
SP140-206ENST00000441657 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
SP140-206ENST00000441657 ASXL2Q76L83 1435 aa11.58□□□□□ -0.56
SP140-206ENST00000441657 KCNA4P22459 653 aa11.57□□□□□ -0.56
SP140-206ENST00000441657 HSPA2P54652 639 aa11.55□□□□□ -0.56
SP140-206ENST00000441657 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
SP140-206ENST00000441657 KIF21BO75037 1637 aa11.53□□□□□ -0.56
SP140-206ENST00000441657 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
SP140-206ENST00000441657 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.57
SP140-206ENST00000441657 EPRSP07814 1512 aaKnown RBP11.5□□□□□ -0.57
SP140-206ENST00000441657 PTPRGP23470 1445 aa11.49□□□□□ -0.57
SP140-206ENST00000441657 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
SP140-206ENST00000441657 KIAA0586Q9BVV6 1533 aa11.49□□□□□ -0.57
SP140-206ENST00000441657 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
SP140-206ENST00000441657 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.57
SP140-206ENST00000441657 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
SP140-206ENST00000441657 CUL7Q14999 1698 aa11.43□□□□□ -0.58
SP140-206ENST00000441657 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
SP140-206ENST00000441657 UHRF1BP1LA0JNW5 1464 aa11.4□□□□□ -0.58
SP140-206ENST00000441657 MADDQ8WXG6 1647 aa11.39□□□□□ -0.59
SP140-206ENST00000441657 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
SP140-206ENST00000441657 MAGI3Q5TCQ9 1506 aa11.38□□□□□ -0.59
SP140-206ENST00000441657 TNIKQ9UKE5 1360 aa11.38□□□□□ -0.59
SP140-206ENST00000441657 ARID4BQ4LE39 1312 aaPredicted RBP11.37□□□□□ -0.59
SP140-206ENST00000441657 CD109Q6YHK3 1445 aa11.37□□□□□ -0.59
SP140-206ENST00000441657 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
SP140-206ENST00000441657 UACAQ9BZF9 1416 aa11.35□□□□□ -0.59
SP140-206ENST00000441657 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
SP140-206ENST00000441657 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
SP140-206ENST00000441657 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
SP140-206ENST00000441657 IQSEC2Q5JU85 1478 aa11.33□□□□□ -0.6
SP140-206ENST00000441657 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
SP140-206ENST00000441657 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
SP140-206ENST00000441657 WDR7Q9Y4E6 1490 aa11.31□□□□□ -0.6
SP140-206ENST00000441657 CFAP43Q8NDM7 1665 aa11.3□□□□□ -0.6
SP140-206ENST00000441657 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
SP140-206ENST00000441657 ZCCHC11Q5TAX3 1644 aaKnown RBP11.28□□□□□ -0.6
SP140-206ENST00000441657 KCNH8Q96L42 1107 aa11.27□□□□□ -0.61
SP140-206ENST00000441657 STRCQ7RTU9 1775 aa11.26□□□□□ -0.61
SP140-206ENST00000441657 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
SP140-206ENST00000441657 LTBP4Q8N2S1 1624 aa11.26□□□□□ -0.61
SP140-206ENST00000441657 PTPRTO14522 1441 aa11.26□□□□□ -0.61
SP140-206ENST00000441657 RAPGEF3O95398 923 aa11.25□□□□□ -0.61
SP140-206ENST00000441657 PHLDB1Q86UU1 1377 aa11.25□□□□□ -0.61
SP140-206ENST00000441657 POGZQ7Z3K3 1410 aa11.21□□□□□ -0.61
SP140-206ENST00000441657 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
SP140-206ENST00000441657 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
SP140-206ENST00000441657 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
SP140-206ENST00000441657 HSPA1LP34931 641 aa11.19□□□□□ -0.62
SP140-206ENST00000441657 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
SP140-206ENST00000441657 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
SP140-206ENST00000441657 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
SP140-206ENST00000441657 TTC37Q6PGP7 1564 aa11.15□□□□□ -0.62
SP140-206ENST00000441657 SETD1BQ9UPS6 1966 aaKnown RBP11.14□□□□□ -0.63
SP140-206ENST00000441657 FANCAO15360 1455 aa11.14□□□□□ -0.63
SP140-206ENST00000441657 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
SP140-206ENST00000441657 ARHGEF40Q8TER5 1519 aa11.14□□□□□ -0.63
SP140-206ENST00000441657 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
SP140-206ENST00000441657 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
SP140-206ENST00000441657 MLECQ14165 292 aa11.13□□□□□ -0.63
SP140-206ENST00000441657 IGF1RP08069 1367 aa11.13□□□□□ -0.63
SP140-206ENST00000441657 FER1L4A9Z1Z3 1794 aa11.12□□□□□ -0.63
SP140-206ENST00000441657 CEBPAP49715 358 aaPredicted RBP11.11□□□□□ -0.63
SP140-206ENST00000441657 NEO1Q92859 1461 aa11.11□□□□□ -0.63
SP140-206ENST00000441657 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
SP140-206ENST00000441657 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
SP140-206ENST00000441657 AKNAQ7Z591 1439 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms