RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 ZNF777Q9ULD5 760 aaPredicted RBP15.42■□□□□ 0.06
STRC-203ENST00000440125 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
STRC-203ENST00000440125 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
STRC-203ENST00000440125 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
STRC-203ENST00000440125 ANP32AP39687 249 aaKnown RBP15.4■□□□□ 0.06
STRC-203ENST00000440125 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
STRC-203ENST00000440125 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
STRC-203ENST00000440125 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
STRC-203ENST00000440125 CC2D2AQ9P2K1 1620 aa15.38■□□□□ 0.05
STRC-203ENST00000440125 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
STRC-203ENST00000440125 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
STRC-203ENST00000440125 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
STRC-203ENST00000440125 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
STRC-203ENST00000440125 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
STRC-203ENST00000440125 SALL2Q9Y467 1007 aaPredicted RBP15.36■□□□□ 0.05
STRC-203ENST00000440125 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
STRC-203ENST00000440125 NBR1Q14596 966 aa15.33■□□□□ 0.04
STRC-203ENST00000440125 CCDC136Q96JN2 1154 aa15.32■□□□□ 0.04
STRC-203ENST00000440125 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
STRC-203ENST00000440125 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
STRC-203ENST00000440125 TMC1Q8TDI8 760 aa15.29■□□□□ 0.04
STRC-203ENST00000440125 TSHZ2Q9NRE2 1034 aa15.28■□□□□ 0.04
STRC-203ENST00000440125 NESP48681 1621 aa15.28■□□□□ 0.04
STRC-203ENST00000440125 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
STRC-203ENST00000440125 CUX2O14529 1486 aa15.27■□□□□ 0.04
STRC-203ENST00000440125 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
STRC-203ENST00000440125 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
STRC-203ENST00000440125 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
STRC-203ENST00000440125 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
STRC-203ENST00000440125 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
STRC-203ENST00000440125 KDM2AQ9Y2K7 1162 aa15.22■□□□□ 0.03
STRC-203ENST00000440125 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
STRC-203ENST00000440125 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
STRC-203ENST00000440125 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
STRC-203ENST00000440125 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
STRC-203ENST00000440125 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
STRC-203ENST00000440125 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
STRC-203ENST00000440125 PPP4R2Q9NY27 417 aa15.15■□□□□ 0.02
STRC-203ENST00000440125 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
STRC-203ENST00000440125 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
STRC-203ENST00000440125 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
STRC-203ENST00000440125 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
STRC-203ENST00000440125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
STRC-203ENST00000440125 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
STRC-203ENST00000440125 CFTRP13569 1480 aa15.07■□□□□ 0
STRC-203ENST00000440125 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
STRC-203ENST00000440125 TSPY4P0CV99 314 aa15.07■□□□□ 0
STRC-203ENST00000440125 TSPY10P0CW01 314 aa15.07■□□□□ 0
STRC-203ENST00000440125 BCL11AQ9H165 835 aa15.06■□□□□ 0
STRC-203ENST00000440125 FOXD1Q16676 465 aa15.05■□□□□ -0
STRC-203ENST00000440125 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
STRC-203ENST00000440125 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
STRC-203ENST00000440125 FGD5Q6ZNL6 1462 aa15.02□□□□□ -0.01
STRC-203ENST00000440125 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
STRC-203ENST00000440125 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
STRC-203ENST00000440125 CARD11Q9BXL7 1154 aa15□□□□□ -0.01
STRC-203ENST00000440125 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
STRC-203ENST00000440125 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
STRC-203ENST00000440125 WDR43Q15061 677 aaKnown RBP eCLIP14.97□□□□□ -0.01
STRC-203ENST00000440125 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.01
STRC-203ENST00000440125 KIF21BO75037 1637 aa14.96□□□□□ -0.01
STRC-203ENST00000440125 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
STRC-203ENST00000440125 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
STRC-203ENST00000440125 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
STRC-203ENST00000440125 MPHOSPH9Q99550 1183 aa14.92□□□□□ -0.02
STRC-203ENST00000440125 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
STRC-203ENST00000440125 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
STRC-203ENST00000440125 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
STRC-203ENST00000440125 DEKP35659 375 aaKnown RBP14.91□□□□□ -0.02
STRC-203ENST00000440125 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
STRC-203ENST00000440125 ARXQ96QS3 562 aa14.89□□□□□ -0.03
STRC-203ENST00000440125 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
STRC-203ENST00000440125 IGF1RP08069 1367 aa14.89□□□□□ -0.03
STRC-203ENST00000440125 ERICH6BQ5W0A0 696 aa14.88□□□□□ -0.03
STRC-203ENST00000440125 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
STRC-203ENST00000440125 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
STRC-203ENST00000440125 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
STRC-203ENST00000440125 NEFMP07197 916 aa14.86□□□□□ -0.03
STRC-203ENST00000440125 TOPBP1Q92547 1522 aa14.86□□□□□ -0.03
STRC-203ENST00000440125 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
STRC-203ENST00000440125 DCAF11Q8TEB1 546 aa14.86□□□□□ -0.03
STRC-203ENST00000440125 CUX1P39880 1505 aa14.85□□□□□ -0.03
STRC-203ENST00000440125 CC2D1BQ5T0F9 858 aaKnown RBP14.85□□□□□ -0.03
STRC-203ENST00000440125 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
STRC-203ENST00000440125 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
STRC-203ENST00000440125 ARAP1Q96P48 1450 aa14.84□□□□□ -0.03
STRC-203ENST00000440125 DDRGK1Q96HY6 314 aa14.83□□□□□ -0.03
STRC-203ENST00000440125 PKD2Q13563 968 aa14.83□□□□□ -0.04
STRC-203ENST00000440125 PHLDB1Q86UU1 1377 aa14.83□□□□□ -0.04
STRC-203ENST00000440125 POLA1P09884 1462 aaPredicted RBP14.83□□□□□ -0.04
STRC-203ENST00000440125 RGS3P49796 1198 aa14.81□□□□□ -0.04
STRC-203ENST00000440125 PRKRIP1Q9H875 184 aaPredicted RBP14.8□□□□□ -0.04
STRC-203ENST00000440125 KNSTRNQ9Y448 316 aa14.8□□□□□ -0.04
STRC-203ENST00000440125 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
STRC-203ENST00000440125 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
STRC-203ENST00000440125 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
STRC-203ENST00000440125 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
STRC-203ENST00000440125 HSP90AA1P07900 732 aaKnown RBP14.78□□□□□ -0.04
STRC-203ENST00000440125 NUDCQ9Y266 331 aa14.78□□□□□ -0.04
STRC-203ENST00000440125 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms