RNA–Protein interactions for RNA: ENST00000439887.6

GSPT1-203, Transcript of G1 to S phase transition 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSPT1, Length 2,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSPT1-203ENST00000439887 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
GSPT1-203ENST00000439887 YTHDC1Q96MU7 727 aaKnown RBP30.5■■■□□ 2.47
GSPT1-203ENST00000439887 MAP3K1Q13233 1512 aa30.48■■■□□ 2.47
GSPT1-203ENST00000439887 LRRC9Q6ZRR7 1453 aa30.46■■■□□ 2.47
GSPT1-203ENST00000439887 GTF3C3Q9Y5Q9 886 aa30.46■■■□□ 2.47
GSPT1-203ENST00000439887 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
GSPT1-203ENST00000439887 PCF11O94913 1555 aaKnown RBP30.42■■■□□ 2.46
GSPT1-203ENST00000439887 FHOD3Q2V2M9 1422 aa30.42■■■□□ 2.46
GSPT1-203ENST00000439887 PHLDB1Q86UU1 1377 aa30.39■■■□□ 2.46
GSPT1-203ENST00000439887 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
GSPT1-203ENST00000439887 FAM50AQ14320 339 aaKnown RBP30.36■■■□□ 2.45
GSPT1-203ENST00000439887 CUL7Q14999 1698 aa30.36■■■□□ 2.45
GSPT1-203ENST00000439887 RAB3GAP2Q9H2M9 1393 aa30.36■■■□□ 2.45
GSPT1-203ENST00000439887 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
GSPT1-203ENST00000439887 CFAP43Q8NDM7 1665 aa30.34■■■□□ 2.45
GSPT1-203ENST00000439887 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
GSPT1-203ENST00000439887 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
GSPT1-203ENST00000439887 TDRD9Q8NDG6 1382 aaKnown RBP30.29■■■□□ 2.44
GSPT1-203ENST00000439887 EFCAB5A4FU69 1503 aa30.27■■■□□ 2.44
GSPT1-203ENST00000439887 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
GSPT1-203ENST00000439887 SETD5Q9C0A6 1442 aa30.24■■■□□ 2.43
GSPT1-203ENST00000439887 FYCO1Q9BQS8 1478 aa30.24■■■□□ 2.43
GSPT1-203ENST00000439887 CASKIN1Q8WXD9 1431 aa30.22■■■□□ 2.43
GSPT1-203ENST00000439887 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
GSPT1-203ENST00000439887 MAPKBP1O60336 1514 aa30.17■■■□□ 2.42
GSPT1-203ENST00000439887 GAPVD1Q14C86 1478 aa30.17■■■□□ 2.42
GSPT1-203ENST00000439887 ABCA5Q8WWZ7 1642 aa30.16■■■□□ 2.42
GSPT1-203ENST00000439887 AQRO60306 1485 aaKnown RBP eCLIP30.15■■■□□ 2.422e-6■■■■□ 20.6
GSPT1-203ENST00000439887 KIF21AQ7Z4S6 1674 aa30.13■■■□□ 2.41
GSPT1-203ENST00000439887 FMN1Q68DA7 1419 aa30.13■■■□□ 2.41
GSPT1-203ENST00000439887 PELP1Q8IZL8 1130 aaKnown RBP30.06■■■□□ 2.4
GSPT1-203ENST00000439887 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
GSPT1-203ENST00000439887 SIN3AQ96ST3 1273 aa30.05■■■□□ 2.4
GSPT1-203ENST00000439887 MTUS2Q5JR59 1369 aa30.02■■■□□ 2.4
GSPT1-203ENST00000439887 SAMD9Q5K651 1589 aa30.01■■■□□ 2.39
GSPT1-203ENST00000439887 FGD6Q6ZV73 1430 aa29.97■■■□□ 2.39
GSPT1-203ENST00000439887 LRRIQ1Q96JM4 1722 aa29.97■■■□□ 2.39
GSPT1-203ENST00000439887 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.39
GSPT1-203ENST00000439887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.95■■■□□ 2.38
GSPT1-203ENST00000439887 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
GSPT1-203ENST00000439887 NCOA2Q15596 1464 aa29.85■■■□□ 2.37
GSPT1-203ENST00000439887 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
GSPT1-203ENST00000439887 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
GSPT1-203ENST00000439887 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
GSPT1-203ENST00000439887 SUPT6HQ7KZ85 1726 aaKnown RBP29.79■■■□□ 2.36
GSPT1-203ENST00000439887 THOC2Q8NI27 1593 aaKnown RBP29.78■■■□□ 2.36
GSPT1-203ENST00000439887 CCDC18Q5T9S5 1454 aa29.78■■■□□ 2.36
GSPT1-203ENST00000439887 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.35
GSPT1-203ENST00000439887 TIMELESSQ9UNS1 1208 aa29.74■■■□□ 2.35
GSPT1-203ENST00000439887 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
GSPT1-203ENST00000439887 MAGI3Q5TCQ9 1506 aa29.73■■■□□ 2.35
GSPT1-203ENST00000439887 HFM1A2PYH4 1435 aa29.72■■■□□ 2.35
GSPT1-203ENST00000439887 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
GSPT1-203ENST00000439887 IQGAP2Q13576 1575 aa29.71■■■□□ 2.35
GSPT1-203ENST00000439887 PPP1R15AO75807 674 aaPredicted RBP29.71■■■□□ 2.35
GSPT1-203ENST00000439887 ADAMTS12P58397 1594 aa29.7■■■□□ 2.35
GSPT1-203ENST00000439887 HIRIP3Q9BW71 556 aaPredicted RBP29.7■■■□□ 2.35
GSPT1-203ENST00000439887 ARID3CA6NKF2 412 aa29.7■■■□□ 2.34
GSPT1-203ENST00000439887 DDX10Q13206 875 aaKnown RBP29.7■■■□□ 2.34
GSPT1-203ENST00000439887 UGGT2Q9NYU1 1516 aa29.68■■■□□ 2.34
GSPT1-203ENST00000439887 NAIPQ13075 1403 aa29.66■■■□□ 2.34
GSPT1-203ENST00000439887 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
GSPT1-203ENST00000439887 HECW1Q76N89 1606 aa29.65■■■□□ 2.34
GSPT1-203ENST00000439887 KCNH8Q96L42 1107 aa29.65■■■□□ 2.34
GSPT1-203ENST00000439887 CHIC2Q9UKJ5 165 aa29.64■■■□□ 2.33
GSPT1-203ENST00000439887 TONSLQ96HA7 1378 aa29.63■■■□□ 2.33
GSPT1-203ENST00000439887 RRP7BPQ9NSQ0 103 aa29.62■■■□□ 2.33
GSPT1-203ENST00000439887 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
GSPT1-203ENST00000439887 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
GSPT1-203ENST00000439887 EPRSP07814 1512 aaKnown RBP29.6■■■□□ 2.33
GSPT1-203ENST00000439887 CDK13Q14004 1512 aaKnown RBP29.6■■■□□ 2.33
GSPT1-203ENST00000439887 IFT140Q96RY7 1462 aa29.53■■■□□ 2.32
GSPT1-203ENST00000439887 WDR62O43379 1518 aa29.52■■■□□ 2.32
GSPT1-203ENST00000439887 TCOF1Q13428 1488 aaKnown RBP29.5■■■□□ 2.31
GSPT1-203ENST00000439887 TRIM52Q96A61 297 aa29.48■■■□□ 2.31
GSPT1-203ENST00000439887 GCC2Q8IWJ2 1684 aa29.41■■■□□ 2.3
GSPT1-203ENST00000439887 KIAA0586Q9BVV6 1533 aa29.41■■■□□ 2.3
GSPT1-203ENST00000439887 KDM6BO15054 1643 aa29.41■■■□□ 2.3
GSPT1-203ENST00000439887 MIA2Q96PC5 1412 aa29.4■■■□□ 2.3
GSPT1-203ENST00000439887 DISP1Q96F81 1524 aa29.39■■■□□ 2.3
GSPT1-203ENST00000439887 KIAA0556O60303 1618 aa29.39■■■□□ 2.3
GSPT1-203ENST00000439887 SUPT16HQ9Y5B9 1047 aaKnown RBP29.39■■■□□ 2.3
GSPT1-203ENST00000439887 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
GSPT1-203ENST00000439887 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
GSPT1-203ENST00000439887 ANP32CO43423 234 aa29.34■■■□□ 2.29
GSPT1-203ENST00000439887 DENND4BO75064 1496 aaPredicted RBP29.32■■■□□ 2.28
GSPT1-203ENST00000439887 ERCC6Q03468 1493 aa29.31■■■□□ 2.28
GSPT1-203ENST00000439887 KDM5BQ9UGL1 1544 aa29.31■■■□□ 2.28
GSPT1-203ENST00000439887 NUP153P49790 1475 aaKnown RBP29.31■■■□□ 2.28
GSPT1-203ENST00000439887 AKNAQ7Z591 1439 aa29.3■■■□□ 2.28
GSPT1-203ENST00000439887 MPHOSPH9Q99550 1183 aa29.3■■■□□ 2.28
GSPT1-203ENST00000439887 ZNF644Q9H582 1327 aaPredicted RBP29.29■■■□□ 2.28
GSPT1-203ENST00000439887 FOXD1Q16676 465 aa29.29■■■□□ 2.28
GSPT1-203ENST00000439887 RAPGEF6Q8TEU7 1601 aa29.29■■■□□ 2.28
GSPT1-203ENST00000439887 FBLN2P98095 1184 aa29.27■■■□□ 2.28
GSPT1-203ENST00000439887 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
GSPT1-203ENST00000439887 DAPK1P53355 1430 aa29.25■■■□□ 2.27
GSPT1-203ENST00000439887 CDK11AQ9UQ88 783 aaPredicted RBP29.24■■■□□ 2.27
GSPT1-203ENST00000439887 CCER2I3L3R5 266 aa29.23■■■□□ 2.27
GSPT1-203ENST00000439887 ABCC5O15440 1437 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms