RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 FBLN2P98095 1184 aa11.07□□□□□ -0.64
LINC00460-202ENST00000439790 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00460-202ENST00000439790 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
LINC00460-202ENST00000439790 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
LINC00460-202ENST00000439790 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
LINC00460-202ENST00000439790 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
LINC00460-202ENST00000439790 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
LINC00460-202ENST00000439790 ABCB7O75027 752 aa11□□□□□ -0.65
LINC00460-202ENST00000439790 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
LINC00460-202ENST00000439790 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
LINC00460-202ENST00000439790 WIZO95785 1651 aa10.98□□□□□ -0.65
LINC00460-202ENST00000439790 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
LINC00460-202ENST00000439790 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
LINC00460-202ENST00000439790 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
LINC00460-202ENST00000439790 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
LINC00460-202ENST00000439790 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
LINC00460-202ENST00000439790 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
LINC00460-202ENST00000439790 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
LINC00460-202ENST00000439790 TDRD9Q8NDG6 1382 aaKnown RBP10.88□□□□□ -0.67
LINC00460-202ENST00000439790 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
LINC00460-202ENST00000439790 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
LINC00460-202ENST00000439790 CHMP7Q8WUX9 453 aaPredicted RBP10.85□□□□□ -0.67
LINC00460-202ENST00000439790 HECW2Q9P2P5 1572 aa10.85□□□□□ -0.67
LINC00460-202ENST00000439790 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
LINC00460-202ENST00000439790 CENPBP07199 599 aaPredicted RBP10.84□□□□□ -0.67
LINC00460-202ENST00000439790 FBXO41Q8TF61 875 aa10.84□□□□□ -0.67
LINC00460-202ENST00000439790 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
LINC00460-202ENST00000439790 DNMBPQ6XZF7 1577 aa10.82□□□□□ -0.68
LINC00460-202ENST00000439790 LMTK3Q96Q04 1460 aa10.81□□□□□ -0.68
LINC00460-202ENST00000439790 ILDR2Q71H61 639 aa10.8□□□□□ -0.68
LINC00460-202ENST00000439790 ZBTB22O15209 634 aa10.79□□□□□ -0.68
LINC00460-202ENST00000439790 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
LINC00460-202ENST00000439790 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
LINC00460-202ENST00000439790 TOP2AP11388 1531 aaKnown RBP10.78□□□□□ -0.68
LINC00460-202ENST00000439790 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
LINC00460-202ENST00000439790 ADGRL1O94910 1474 aa10.77□□□□□ -0.69
LINC00460-202ENST00000439790 FAM69CQ0P6D2 419 aa10.77□□□□□ -0.69
LINC00460-202ENST00000439790 ABCC8Q09428 1581 aa10.77□□□□□ -0.69
LINC00460-202ENST00000439790 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
LINC00460-202ENST00000439790 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
LINC00460-202ENST00000439790 SOGA1O94964 1423 aa10.75□□□□□ -0.69
LINC00460-202ENST00000439790 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
LINC00460-202ENST00000439790 KDM6BO15054 1643 aa10.74□□□□□ -0.69
LINC00460-202ENST00000439790 SOCS7O14512 581 aa10.73□□□□□ -0.69
LINC00460-202ENST00000439790 POLA2Q14181 598 aa10.72□□□□□ -0.69
LINC00460-202ENST00000439790 ATF5Q9Y2D1 282 aaPredicted RBP10.72□□□□□ -0.69
LINC00460-202ENST00000439790 CCDC88BA6NC98 1476 aa10.71□□□□□ -0.69
LINC00460-202ENST00000439790 GRIN2BQ13224 1484 aa10.71□□□□□ -0.69
LINC00460-202ENST00000439790 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
LINC00460-202ENST00000439790 CEP170Q5SW79 1584 aa10.69□□□□□ -0.7
LINC00460-202ENST00000439790 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
LINC00460-202ENST00000439790 FGD5Q6ZNL6 1462 aa10.66□□□□□ -0.7
LINC00460-202ENST00000439790 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
LINC00460-202ENST00000439790 NUP160Q12769 1436 aa10.61□□□□□ -0.71
LINC00460-202ENST00000439790 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
LINC00460-202ENST00000439790 SHROOM2Q13796 1616 aa10.6□□□□□ -0.71
LINC00460-202ENST00000439790 AKT1S1Q96B36 256 aa10.6□□□□□ -0.71
LINC00460-202ENST00000439790 DISP3Q9P2K9 1392 aa10.6□□□□□ -0.71
LINC00460-202ENST00000439790 GRIN2AQ12879 1464 aa10.6□□□□□ -0.71
LINC00460-202ENST00000439790 COL17A1Q9UMD9 1497 aaPredicted RBP10.6□□□□□ -0.71
LINC00460-202ENST00000439790 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
LINC00460-202ENST00000439790 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
LINC00460-202ENST00000439790 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
LINC00460-202ENST00000439790 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
LINC00460-202ENST00000439790 CUX1P39880 1505 aa10.56□□□□□ -0.72
LINC00460-202ENST00000439790 PRG4Q92954 1404 aaPredicted RBP10.56□□□□□ -0.72
LINC00460-202ENST00000439790 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
LINC00460-202ENST00000439790 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
LINC00460-202ENST00000439790 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
LINC00460-202ENST00000439790 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
LINC00460-202ENST00000439790 NEUROD1Q13562 356 aa10.52□□□□□ -0.73
LINC00460-202ENST00000439790 ABCA5Q8WWZ7 1642 aa10.51□□□□□ -0.73
LINC00460-202ENST00000439790 PPRC1Q5VV67 1664 aaKnown RBP10.5□□□□□ -0.73
LINC00460-202ENST00000439790 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00460-202ENST00000439790 ADAMTS12P58397 1594 aa10.5□□□□□ -0.73
LINC00460-202ENST00000439790 DIEXFQ68CQ4 756 aaKnown RBP10.49□□□□□ -0.73
LINC00460-202ENST00000439790 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
LINC00460-202ENST00000439790 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
LINC00460-202ENST00000439790 ABCA10Q8WWZ4 1543 aa10.47□□□□□ -0.73
LINC00460-202ENST00000439790 REM2Q8IYK8 340 aaPredicted RBP10.46□□□□□ -0.73
LINC00460-202ENST00000439790 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
LINC00460-202ENST00000439790 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
LINC00460-202ENST00000439790 SPATA31D1Q6ZQQ2 1576 aa10.41□□□□□ -0.74
LINC00460-202ENST00000439790 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
LINC00460-202ENST00000439790 CERKQ8TCT0 537 aa10.4□□□□□ -0.74
LINC00460-202ENST00000439790 TOP2BQ02880 1626 aa10.39□□□□□ -0.75
LINC00460-202ENST00000439790 ASXL2Q76L83 1435 aa10.39□□□□□ -0.75
LINC00460-202ENST00000439790 GLI2P10070 1586 aa10.38□□□□□ -0.75
LINC00460-202ENST00000439790 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
LINC00460-202ENST00000439790 ZNF316A6NFI3 1004 aaPredicted RBP10.36□□□□□ -0.75
LINC00460-202ENST00000439790 HAX1O00165 279 aa10.36□□□□□ -0.75
LINC00460-202ENST00000439790 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC00460-202ENST00000439790 PTPRMP28827 1452 aa10.36□□□□□ -0.75
LINC00460-202ENST00000439790 PCF11O94913 1555 aaKnown RBP10.35□□□□□ -0.75
LINC00460-202ENST00000439790 EEA1Q15075 1411 aa10.34□□□□□ -0.75
LINC00460-202ENST00000439790 HSPA2P54652 639 aa10.34□□□□□ -0.75
LINC00460-202ENST00000439790 PITPNM1O00562 1244 aa10.32□□□□□ -0.76
LINC00460-202ENST00000439790 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
LINC00460-202ENST00000439790 KIF21BO75037 1637 aa10.32□□□□□ -0.76
LINC00460-202ENST00000439790 EPRSP07814 1512 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms