RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
SMARCA2-213ENST00000439732 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
SMARCA2-213ENST00000439732 KIAA0586Q9BVV6 1533 aa15.76■□□□□ 0.11
SMARCA2-213ENST00000439732 PRXQ9BXM0 1461 aa15.75■□□□□ 0.11
SMARCA2-213ENST00000439732 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
SMARCA2-213ENST00000439732 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
SMARCA2-213ENST00000439732 PRG4Q92954 1404 aaPredicted RBP15.69■□□□□ 0.1
SMARCA2-213ENST00000439732 IQGAP2Q13576 1575 aa15.66■□□□□ 0.1
SMARCA2-213ENST00000439732 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
SMARCA2-213ENST00000439732 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
SMARCA2-213ENST00000439732 KIF21BO75037 1637 aa15.61■□□□□ 0.09
SMARCA2-213ENST00000439732 ERCC6L2Q5T890 1561 aa15.6■□□□□ 0.09
SMARCA2-213ENST00000439732 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
SMARCA2-213ENST00000439732 UBTFP17480 764 aaKnown RBP15.59■□□□□ 0.09
SMARCA2-213ENST00000439732 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
SMARCA2-213ENST00000439732 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
SMARCA2-213ENST00000439732 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
SMARCA2-213ENST00000439732 PTPRGP23470 1445 aa15.55■□□□□ 0.08
SMARCA2-213ENST00000439732 DISP1Q96F81 1524 aa15.53■□□□□ 0.08
SMARCA2-213ENST00000439732 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
SMARCA2-213ENST00000439732 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
SMARCA2-213ENST00000439732 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMARCA2-213ENST00000439732 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
SMARCA2-213ENST00000439732 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
SMARCA2-213ENST00000439732 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
SMARCA2-213ENST00000439732 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
SMARCA2-213ENST00000439732 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
SMARCA2-213ENST00000439732 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
SMARCA2-213ENST00000439732 EFCAB5A4FU69 1503 aa15.39■□□□□ 0.05
SMARCA2-213ENST00000439732 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
SMARCA2-213ENST00000439732 ADCY10Q96PN6 1610 aa15.38■□□□□ 0.05
SMARCA2-213ENST00000439732 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
SMARCA2-213ENST00000439732 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
SMARCA2-213ENST00000439732 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.04
SMARCA2-213ENST00000439732 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
SMARCA2-213ENST00000439732 KDM5BQ9UGL1 1544 aa15.31■□□□□ 0.04
SMARCA2-213ENST00000439732 ABCA8O94911 1581 aa15.31■□□□□ 0.04
SMARCA2-213ENST00000439732 MAPKBP1O60336 1514 aa15.3■□□□□ 0.04
SMARCA2-213ENST00000439732 FMN1Q68DA7 1419 aa15.3■□□□□ 0.04
SMARCA2-213ENST00000439732 ARHGAP35Q9NRY4 1499 aa15.3■□□□□ 0.04
SMARCA2-213ENST00000439732 CLIP1P30622 1438 aa15.29■□□□□ 0.04
SMARCA2-213ENST00000439732 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
SMARCA2-213ENST00000439732 FAM69CQ0P6D2 419 aa15.25■□□□□ 0.03
SMARCA2-213ENST00000439732 ASXL2Q76L83 1435 aa15.25■□□□□ 0.03
SMARCA2-213ENST00000439732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
SMARCA2-213ENST00000439732 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
SMARCA2-213ENST00000439732 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
SMARCA2-213ENST00000439732 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
SMARCA2-213ENST00000439732 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
SMARCA2-213ENST00000439732 ATP10BO94823 1461 aa15.22■□□□□ 0.03
SMARCA2-213ENST00000439732 ARID3CA6NKF2 412 aa15.22■□□□□ 0.03
SMARCA2-213ENST00000439732 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
SMARCA2-213ENST00000439732 PLEKHD1A6NEE1 506 aa15.2■□□□□ 0.02
SMARCA2-213ENST00000439732 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
SMARCA2-213ENST00000439732 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
SMARCA2-213ENST00000439732 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
SMARCA2-213ENST00000439732 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
SMARCA2-213ENST00000439732 KIF13AQ9H1H9 1805 aa15.17■□□□□ 0.02
SMARCA2-213ENST00000439732 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
SMARCA2-213ENST00000439732 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
SMARCA2-213ENST00000439732 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
SMARCA2-213ENST00000439732 EPRSP07814 1512 aaKnown RBP15.15■□□□□ 0.02
SMARCA2-213ENST00000439732 GLI2P10070 1586 aa15.14■□□□□ 0.01
SMARCA2-213ENST00000439732 FYCO1Q9BQS8 1478 aa15.12■□□□□ 0.01
SMARCA2-213ENST00000439732 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
SMARCA2-213ENST00000439732 CDK13Q14004 1512 aaKnown RBP15.08■□□□□ 0.01
SMARCA2-213ENST00000439732 TSPOAP1O95153 1857 aa15.07■□□□□ 0
SMARCA2-213ENST00000439732 CD109Q6YHK3 1445 aa15.07■□□□□ 0
SMARCA2-213ENST00000439732 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
SMARCA2-213ENST00000439732 CFAP43Q8NDM7 1665 aa15.04■□□□□ -0
SMARCA2-213ENST00000439732 MAP3K4Q9Y6R4 1608 aa15.04■□□□□ -0
SMARCA2-213ENST00000439732 TEX14Q8IWB6 1497 aa15.04■□□□□ -0
SMARCA2-213ENST00000439732 VPS8Q8N3P4 1428 aa15.04■□□□□ -0
SMARCA2-213ENST00000439732 TROQ12816 1431 aaPredicted RBP15.02■□□□□ -0
SMARCA2-213ENST00000439732 ABCA9Q8IUA7 1624 aa15.01□□□□□ -0.01
SMARCA2-213ENST00000439732 MAGI3Q5TCQ9 1506 aa15.01□□□□□ -0.01
SMARCA2-213ENST00000439732 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
SMARCA2-213ENST00000439732 APLP2Q06481 763 aa15□□□□□ -0.01
SMARCA2-213ENST00000439732 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
SMARCA2-213ENST00000439732 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
SMARCA2-213ENST00000439732 PPRC1Q5VV67 1664 aaKnown RBP14.97□□□□□ -0.01
SMARCA2-213ENST00000439732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.02
SMARCA2-213ENST00000439732 KIF14Q15058 1648 aa14.95□□□□□ -0.02
SMARCA2-213ENST00000439732 EFCAB2Q5VUJ9 269 aa14.94□□□□□ -0.02
SMARCA2-213ENST00000439732 NEO1Q92859 1461 aa14.93□□□□□ -0.02
SMARCA2-213ENST00000439732 PLCH2O75038 1416 aa14.92□□□□□ -0.02
SMARCA2-213ENST00000439732 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
SMARCA2-213ENST00000439732 KDM6BO15054 1643 aa14.92□□□□□ -0.02
SMARCA2-213ENST00000439732 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
SMARCA2-213ENST00000439732 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
SMARCA2-213ENST00000439732 ARAP3Q8WWN8 1544 aa14.89□□□□□ -0.03
SMARCA2-213ENST00000439732 MYO5CQ9NQX4 1742 aa14.89□□□□□ -0.03
SMARCA2-213ENST00000439732 FANCAO15360 1455 aa14.89□□□□□ -0.03
SMARCA2-213ENST00000439732 EHBP1L1Q8N3D4 1523 aa14.88□□□□□ -0.03
SMARCA2-213ENST00000439732 AKNAQ7Z591 1439 aa14.88□□□□□ -0.03
SMARCA2-213ENST00000439732 CFAP74Q9C0B2 1584 aa14.88□□□□□ -0.03
SMARCA2-213ENST00000439732 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
SMARCA2-213ENST00000439732 LRRC9Q6ZRR7 1453 aa14.86□□□□□ -0.03
SMARCA2-213ENST00000439732 COL17A1Q9UMD9 1497 aaPredicted RBP14.85□□□□□ -0.03
SMARCA2-213ENST00000439732 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms