RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
CDC42EP4-202ENST00000439510 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
CDC42EP4-202ENST00000439510 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
CDC42EP4-202ENST00000439510 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
CDC42EP4-202ENST00000439510 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
CDC42EP4-202ENST00000439510 THOC2Q8NI27 1593 aaKnown RBP22.17■■□□□ 1.14
CDC42EP4-202ENST00000439510 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
CDC42EP4-202ENST00000439510 WDR62O43379 1518 aa22.15■■□□□ 1.14
CDC42EP4-202ENST00000439510 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
CDC42EP4-202ENST00000439510 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
CDC42EP4-202ENST00000439510 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
CDC42EP4-202ENST00000439510 TIAM1Q13009 1591 aa22.08■■□□□ 1.13
CDC42EP4-202ENST00000439510 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.13
CDC42EP4-202ENST00000439510 SUPT16HQ9Y5B9 1047 aaKnown RBP22.08■■□□□ 1.12
CDC42EP4-202ENST00000439510 MAPKBP1O60336 1514 aa22.08■■□□□ 1.12
CDC42EP4-202ENST00000439510 IGF1RP08069 1367 aa22.05■■□□□ 1.12
CDC42EP4-202ENST00000439510 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
CDC42EP4-202ENST00000439510 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.12
CDC42EP4-202ENST00000439510 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
CDC42EP4-202ENST00000439510 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
CDC42EP4-202ENST00000439510 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
CDC42EP4-202ENST00000439510 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
CDC42EP4-202ENST00000439510 IFT140Q96RY7 1462 aa21.95■■□□□ 1.11
CDC42EP4-202ENST00000439510 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
CDC42EP4-202ENST00000439510 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
CDC42EP4-202ENST00000439510 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
CDC42EP4-202ENST00000439510 ITGAEP38570 1179 aa21.93■■□□□ 1.1
CDC42EP4-202ENST00000439510 PRKCSHP14314 528 aaPredicted RBP21.9■■□□□ 1.1
CDC42EP4-202ENST00000439510 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
CDC42EP4-202ENST00000439510 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.09
CDC42EP4-202ENST00000439510 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
CDC42EP4-202ENST00000439510 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
CDC42EP4-202ENST00000439510 PCF11O94913 1555 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-202ENST00000439510 CUL7Q14999 1698 aa21.82■■□□□ 1.08
CDC42EP4-202ENST00000439510 TIMELESSQ9UNS1 1208 aa21.81■■□□□ 1.08
CDC42EP4-202ENST00000439510 KCNH8Q96L42 1107 aa21.81■■□□□ 1.08
CDC42EP4-202ENST00000439510 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
CDC42EP4-202ENST00000439510 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
CDC42EP4-202ENST00000439510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.77■■□□□ 1.07
CDC42EP4-202ENST00000439510 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
CDC42EP4-202ENST00000439510 FYCO1Q9BQS8 1478 aa21.75■■□□□ 1.07
CDC42EP4-202ENST00000439510 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
CDC42EP4-202ENST00000439510 SIN3AQ96ST3 1273 aa21.73■■□□□ 1.07
CDC42EP4-202ENST00000439510 FBLN2P98095 1184 aa21.73■■□□□ 1.07
CDC42EP4-202ENST00000439510 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
CDC42EP4-202ENST00000439510 FAM50AQ14320 339 aaKnown RBP21.72■■□□□ 1.07
CDC42EP4-202ENST00000439510 ADAMTS12P58397 1594 aa21.72■■□□□ 1.07
CDC42EP4-202ENST00000439510 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
CDC42EP4-202ENST00000439510 CASKIN1Q8WXD9 1431 aa21.69■■□□□ 1.06
CDC42EP4-202ENST00000439510 CTTNBP2Q8WZ74 1663 aa21.67■■□□□ 1.06
CDC42EP4-202ENST00000439510 FHOD3Q2V2M9 1422 aa21.66■■□□□ 1.06
CDC42EP4-202ENST00000439510 P3H3Q8IVL6 736 aa21.64■■□□□ 1.06
CDC42EP4-202ENST00000439510 CCER2I3L3R5 266 aa21.64■■□□□ 1.05
CDC42EP4-202ENST00000439510 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
CDC42EP4-202ENST00000439510 FGD6Q6ZV73 1430 aa21.59■■□□□ 1.05
CDC42EP4-202ENST00000439510 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
CDC42EP4-202ENST00000439510 FKBP8Q14318 412 aa21.57■■□□□ 1.04
CDC42EP4-202ENST00000439510 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
CDC42EP4-202ENST00000439510 FMN1Q68DA7 1419 aa21.56■■□□□ 1.04
CDC42EP4-202ENST00000439510 CCDC18Q5T9S5 1454 aa21.55■■□□□ 1.04
CDC42EP4-202ENST00000439510 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
CDC42EP4-202ENST00000439510 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
CDC42EP4-202ENST00000439510 ANP32EQ9BTT0 268 aa21.54■■□□□ 1.04
CDC42EP4-202ENST00000439510 PTPN23Q9H3S7 1636 aa21.54■■□□□ 1.04
CDC42EP4-202ENST00000439510 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
CDC42EP4-202ENST00000439510 ANP32CO43423 234 aa21.53■■□□□ 1.04
CDC42EP4-202ENST00000439510 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
CDC42EP4-202ENST00000439510 BCANQ96GW7 911 aa21.51■■□□□ 1.03
CDC42EP4-202ENST00000439510 LRRIQ1Q96JM4 1722 aa21.51■■□□□ 1.03
CDC42EP4-202ENST00000439510 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
CDC42EP4-202ENST00000439510 SAMD9Q5K651 1589 aa21.49■■□□□ 1.03
CDC42EP4-202ENST00000439510 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
CDC42EP4-202ENST00000439510 PTPRKQ15262 1439 aa21.48■■□□□ 1.03
CDC42EP4-202ENST00000439510 CHD1O14646 1710 aa21.47■■□□□ 1.03
CDC42EP4-202ENST00000439510 CEP170Q5SW79 1584 aa21.47■■□□□ 1.03
CDC42EP4-202ENST00000439510 NEFLP07196 543 aa21.47■■□□□ 1.03
CDC42EP4-202ENST00000439510 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
CDC42EP4-202ENST00000439510 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
CDC42EP4-202ENST00000439510 NAIPQ13075 1403 aa21.44■■□□□ 1.02
CDC42EP4-202ENST00000439510 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
CDC42EP4-202ENST00000439510 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
CDC42EP4-202ENST00000439510 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
CDC42EP4-202ENST00000439510 MYOM3Q5VTT5 1437 aa21.42■■□□□ 1.02
CDC42EP4-202ENST00000439510 NCOA2Q15596 1464 aa21.41■■□□□ 1.02
CDC42EP4-202ENST00000439510 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.02
CDC42EP4-202ENST00000439510 KIAA0586Q9BVV6 1533 aa21.38■■□□□ 1.01
CDC42EP4-202ENST00000439510 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
CDC42EP4-202ENST00000439510 UGGT2Q9NYU1 1516 aa21.35■■□□□ 1.01
CDC42EP4-202ENST00000439510 NUP160Q12769 1436 aa21.35■■□□□ 1.01
CDC42EP4-202ENST00000439510 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
CDC42EP4-202ENST00000439510 HECW1Q76N89 1606 aa21.34■■□□□ 1.01
CDC42EP4-202ENST00000439510 RBM19Q9Y4C8 960 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-202ENST00000439510 TCOF1Q13428 1488 aaKnown RBP21.3■■□□□ 1
CDC42EP4-202ENST00000439510 JPH4Q96JJ6 628 aa21.3■■□□□ 1
CDC42EP4-202ENST00000439510 AKNAQ7Z591 1439 aa21.28■■□□□ 1
CDC42EP4-202ENST00000439510 MAGI3Q5TCQ9 1506 aa21.27■■□□□ 1
CDC42EP4-202ENST00000439510 DENND4BO75064 1496 aaPredicted RBP21.27■■□□□ 1
CDC42EP4-202ENST00000439510 DISP1Q96F81 1524 aa21.27■■□□□ 1
CDC42EP4-202ENST00000439510 ARID3CA6NKF2 412 aa21.26■□□□□ 0.99
CDC42EP4-202ENST00000439510 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms