RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
HCG20-208ENST00000439406 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
HCG20-208ENST00000439406 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
HCG20-208ENST00000439406 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
HCG20-208ENST00000439406 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
HCG20-208ENST00000439406 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
HCG20-208ENST00000439406 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
HCG20-208ENST00000439406 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
HCG20-208ENST00000439406 SOGA1O94964 1423 aa13.16□□□□□ -0.3
HCG20-208ENST00000439406 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
HCG20-208ENST00000439406 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
HCG20-208ENST00000439406 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
HCG20-208ENST00000439406 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
HCG20-208ENST00000439406 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
HCG20-208ENST00000439406 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
HCG20-208ENST00000439406 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
HCG20-208ENST00000439406 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
HCG20-208ENST00000439406 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
HCG20-208ENST00000439406 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
HCG20-208ENST00000439406 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
HCG20-208ENST00000439406 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
HCG20-208ENST00000439406 GAPVD1Q14C86 1478 aa13.08□□□□□ -0.32
HCG20-208ENST00000439406 HOMEZQ8IX15 550 aa13.07□□□□□ -0.32
HCG20-208ENST00000439406 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
HCG20-208ENST00000439406 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
HCG20-208ENST00000439406 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
HCG20-208ENST00000439406 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
HCG20-208ENST00000439406 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
HCG20-208ENST00000439406 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
HCG20-208ENST00000439406 PAXIP1Q6ZW49 1069 aaPredicted RBP12.91□□□□□ -0.34
HCG20-208ENST00000439406 CUX1P39880 1505 aa12.91□□□□□ -0.34
HCG20-208ENST00000439406 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
HCG20-208ENST00000439406 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
HCG20-208ENST00000439406 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
HCG20-208ENST00000439406 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
HCG20-208ENST00000439406 FAM69CQ0P6D2 419 aa12.87□□□□□ -0.35
HCG20-208ENST00000439406 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
HCG20-208ENST00000439406 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
HCG20-208ENST00000439406 GRIN2AQ12879 1464 aa12.86□□□□□ -0.35
HCG20-208ENST00000439406 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
HCG20-208ENST00000439406 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
HCG20-208ENST00000439406 NUP160Q12769 1436 aa12.86□□□□□ -0.35
HCG20-208ENST00000439406 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
HCG20-208ENST00000439406 PKD2Q13563 968 aa12.85□□□□□ -0.35
HCG20-208ENST00000439406 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
HCG20-208ENST00000439406 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
HCG20-208ENST00000439406 NBR1Q14596 966 aa12.82□□□□□ -0.36
HCG20-208ENST00000439406 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
HCG20-208ENST00000439406 ABCC10Q5T3U5 1492 aa12.82□□□□□ -0.36
HCG20-208ENST00000439406 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
HCG20-208ENST00000439406 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
HCG20-208ENST00000439406 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
HCG20-208ENST00000439406 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
HCG20-208ENST00000439406 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
HCG20-208ENST00000439406 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
HCG20-208ENST00000439406 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
HCG20-208ENST00000439406 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
HCG20-208ENST00000439406 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
HCG20-208ENST00000439406 MAPKBP1O60336 1514 aa12.74□□□□□ -0.37
HCG20-208ENST00000439406 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
HCG20-208ENST00000439406 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
HCG20-208ENST00000439406 KDM6BO15054 1643 aa12.71□□□□□ -0.37
HCG20-208ENST00000439406 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
HCG20-208ENST00000439406 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
HCG20-208ENST00000439406 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
HCG20-208ENST00000439406 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
HCG20-208ENST00000439406 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
HCG20-208ENST00000439406 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
HCG20-208ENST00000439406 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
HCG20-208ENST00000439406 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
HCG20-208ENST00000439406 TSPOAP1O95153 1857 aa12.61□□□□□ -0.39
HCG20-208ENST00000439406 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
HCG20-208ENST00000439406 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
HCG20-208ENST00000439406 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
HCG20-208ENST00000439406 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
HCG20-208ENST00000439406 PROM2Q8N271 834 aa12.57□□□□□ -0.4
HCG20-208ENST00000439406 PTPRGP23470 1445 aa12.56□□□□□ -0.4
HCG20-208ENST00000439406 RUSC2Q8N2Y8 1516 aa12.56□□□□□ -0.4
HCG20-208ENST00000439406 PLB1Q6P1J6 1458 aa12.54□□□□□ -0.4
HCG20-208ENST00000439406 FBXO41Q8TF61 875 aa12.54□□□□□ -0.4
HCG20-208ENST00000439406 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
HCG20-208ENST00000439406 GLI2P10070 1586 aa12.53□□□□□ -0.4
HCG20-208ENST00000439406 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.41
HCG20-208ENST00000439406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
HCG20-208ENST00000439406 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
HCG20-208ENST00000439406 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
HCG20-208ENST00000439406 ASXL2Q76L83 1435 aa12.51□□□□□ -0.41
HCG20-208ENST00000439406 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
HCG20-208ENST00000439406 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
HCG20-208ENST00000439406 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
HCG20-208ENST00000439406 IGF1RP08069 1367 aa12.49□□□□□ -0.41
HCG20-208ENST00000439406 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
HCG20-208ENST00000439406 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.41
HCG20-208ENST00000439406 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.41
HCG20-208ENST00000439406 PPRC1Q5VV67 1664 aaKnown RBP12.46□□□□□ -0.41
HCG20-208ENST00000439406 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
HCG20-208ENST00000439406 SUPT5HO00267 1087 aaKnown RBP12.44□□□□□ -0.42
HCG20-208ENST00000439406 SPOCK2Q92563 424 aa12.44□□□□□ -0.42
HCG20-208ENST00000439406 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
HCG20-208ENST00000439406 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms