RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
HLA-DOB-206ENST00000438763 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
HLA-DOB-206ENST00000438763 CUL7Q14999 1698 aa19.87■□□□□ 0.77
HLA-DOB-206ENST00000438763 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
HLA-DOB-206ENST00000438763 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
HLA-DOB-206ENST00000438763 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
HLA-DOB-206ENST00000438763 MAGI1Q96QZ7 1491 aaPredicted RBP19.76■□□□□ 0.75
HLA-DOB-206ENST00000438763 CEP162Q5TB80 1403 aa19.75■□□□□ 0.75
HLA-DOB-206ENST00000438763 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
HLA-DOB-206ENST00000438763 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
HLA-DOB-206ENST00000438763 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
HLA-DOB-206ENST00000438763 CLIP1P30622 1438 aa19.65■□□□□ 0.74
HLA-DOB-206ENST00000438763 ILDR1Q86SU0 546 aaPredicted RBP19.61■□□□□ 0.73
HLA-DOB-206ENST00000438763 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
HLA-DOB-206ENST00000438763 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.73
HLA-DOB-206ENST00000438763 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
HLA-DOB-206ENST00000438763 KIF13AQ9H1H9 1805 aa19.56■□□□□ 0.72
HLA-DOB-206ENST00000438763 ARHGAP35Q9NRY4 1499 aa19.52■□□□□ 0.71
HLA-DOB-206ENST00000438763 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
HLA-DOB-206ENST00000438763 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
HLA-DOB-206ENST00000438763 NUP160Q12769 1436 aa19.5■□□□□ 0.71
HLA-DOB-206ENST00000438763 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
HLA-DOB-206ENST00000438763 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
HLA-DOB-206ENST00000438763 EFCAB5A4FU69 1503 aa19.47■□□□□ 0.71
HLA-DOB-206ENST00000438763 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
HLA-DOB-206ENST00000438763 FAM69CQ0P6D2 419 aa19.42■□□□□ 0.7
HLA-DOB-206ENST00000438763 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
HLA-DOB-206ENST00000438763 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
HLA-DOB-206ENST00000438763 SAMD9Q5K651 1589 aa19.4■□□□□ 0.7
HLA-DOB-206ENST00000438763 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
HLA-DOB-206ENST00000438763 JPH4Q96JJ6 628 aa19.37■□□□□ 0.69
HLA-DOB-206ENST00000438763 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
HLA-DOB-206ENST00000438763 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
HLA-DOB-206ENST00000438763 PRG4Q92954 1404 aaPredicted RBP19.32■□□□□ 0.68
HLA-DOB-206ENST00000438763 FMN1Q68DA7 1419 aa19.31■□□□□ 0.68
HLA-DOB-206ENST00000438763 KDM6BO15054 1643 aa19.31■□□□□ 0.68
HLA-DOB-206ENST00000438763 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
HLA-DOB-206ENST00000438763 APLP2Q06481 763 aa19.3■□□□□ 0.68
HLA-DOB-206ENST00000438763 DIP2BQ9P265 1576 aa19.29■□□□□ 0.68
HLA-DOB-206ENST00000438763 CARMIL2Q6F5E8 1435 aa19.28■□□□□ 0.68
HLA-DOB-206ENST00000438763 KIAA0556O60303 1618 aa19.27■□□□□ 0.68
HLA-DOB-206ENST00000438763 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
HLA-DOB-206ENST00000438763 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
HLA-DOB-206ENST00000438763 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
HLA-DOB-206ENST00000438763 CASKIN1Q8WXD9 1431 aa19.24■□□□□ 0.67
HLA-DOB-206ENST00000438763 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
HLA-DOB-206ENST00000438763 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
HLA-DOB-206ENST00000438763 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
HLA-DOB-206ENST00000438763 MAP3K1Q13233 1512 aa19.2■□□□□ 0.66
HLA-DOB-206ENST00000438763 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
HLA-DOB-206ENST00000438763 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
HLA-DOB-206ENST00000438763 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
HLA-DOB-206ENST00000438763 ADGRL1O94910 1474 aa19.13■□□□□ 0.65
HLA-DOB-206ENST00000438763 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
HLA-DOB-206ENST00000438763 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
HLA-DOB-206ENST00000438763 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
HLA-DOB-206ENST00000438763 PTPRGP23470 1445 aa19.11■□□□□ 0.65
HLA-DOB-206ENST00000438763 HECW2Q9P2P5 1572 aa19.1■□□□□ 0.65
HLA-DOB-206ENST00000438763 HECW1Q76N89 1606 aa19.08■□□□□ 0.65
HLA-DOB-206ENST00000438763 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
HLA-DOB-206ENST00000438763 RAPGEF6Q8TEU7 1601 aa19.06■□□□□ 0.64
HLA-DOB-206ENST00000438763 CFAP43Q8NDM7 1665 aa19.06■□□□□ 0.64
HLA-DOB-206ENST00000438763 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
HLA-DOB-206ENST00000438763 PLB1Q6P1J6 1458 aa19.04■□□□□ 0.64
HLA-DOB-206ENST00000438763 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
HLA-DOB-206ENST00000438763 ABCA8O94911 1581 aa19.03■□□□□ 0.64
HLA-DOB-206ENST00000438763 NUP153P49790 1475 aaKnown RBP19.02■□□□□ 0.64
HLA-DOB-206ENST00000438763 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
HLA-DOB-206ENST00000438763 LRRIQ1Q96JM4 1722 aa19.01■□□□□ 0.63
HLA-DOB-206ENST00000438763 PPRC1Q5VV67 1664 aaKnown RBP19■□□□□ 0.63
HLA-DOB-206ENST00000438763 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
HLA-DOB-206ENST00000438763 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
HLA-DOB-206ENST00000438763 COL17A1Q9UMD9 1497 aaPredicted RBP18.96■□□□□ 0.63
HLA-DOB-206ENST00000438763 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.62
HLA-DOB-206ENST00000438763 CDK11AQ9UQ88 783 aaPredicted RBP18.95■□□□□ 0.62
HLA-DOB-206ENST00000438763 ARID3CA6NKF2 412 aa18.93■□□□□ 0.62
HLA-DOB-206ENST00000438763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
HLA-DOB-206ENST00000438763 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
HLA-DOB-206ENST00000438763 ASXL2Q76L83 1435 aa18.92■□□□□ 0.62
HLA-DOB-206ENST00000438763 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
HLA-DOB-206ENST00000438763 UHRF1BP1LA0JNW5 1464 aa18.92■□□□□ 0.62
HLA-DOB-206ENST00000438763 ATP10BO94823 1461 aa18.92■□□□□ 0.62
HLA-DOB-206ENST00000438763 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
HLA-DOB-206ENST00000438763 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
HLA-DOB-206ENST00000438763 GLI2P10070 1586 aa18.89■□□□□ 0.62
HLA-DOB-206ENST00000438763 FBXO41Q8TF61 875 aa18.88■□□□□ 0.61
HLA-DOB-206ENST00000438763 PLEKHD1A6NEE1 506 aa18.87■□□□□ 0.61
HLA-DOB-206ENST00000438763 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
HLA-DOB-206ENST00000438763 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
HLA-DOB-206ENST00000438763 TROQ12816 1431 aaPredicted RBP18.85■□□□□ 0.61
HLA-DOB-206ENST00000438763 SUPT6HQ7KZ85 1726 aaKnown RBP18.85■□□□□ 0.61
HLA-DOB-206ENST00000438763 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
HLA-DOB-206ENST00000438763 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
HLA-DOB-206ENST00000438763 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
HLA-DOB-206ENST00000438763 MAP3K4Q9Y6R4 1608 aa18.79■□□□□ 0.6
HLA-DOB-206ENST00000438763 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.59
HLA-DOB-206ENST00000438763 TEX14Q8IWB6 1497 aa18.76■□□□□ 0.59
HLA-DOB-206ENST00000438763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.74■□□□□ 0.59
HLA-DOB-206ENST00000438763 FGD6Q6ZV73 1430 aa18.74■□□□□ 0.59
HLA-DOB-206ENST00000438763 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms