RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
PDLIM5-206ENST00000437932 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
PDLIM5-206ENST00000437932 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
PDLIM5-206ENST00000437932 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
PDLIM5-206ENST00000437932 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
PDLIM5-206ENST00000437932 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-206ENST00000437932 KIF21BO75037 1637 aa16.14■□□□□ 0.17
PDLIM5-206ENST00000437932 FOXD1Q16676 465 aa16.13■□□□□ 0.17
PDLIM5-206ENST00000437932 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-206ENST00000437932 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
PDLIM5-206ENST00000437932 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.17
PDLIM5-206ENST00000437932 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.16
PDLIM5-206ENST00000437932 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
PDLIM5-206ENST00000437932 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
PDLIM5-206ENST00000437932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.162e-6■□□□□ 11
PDLIM5-206ENST00000437932 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
PDLIM5-206ENST00000437932 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-206ENST00000437932 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
PDLIM5-206ENST00000437932 CLSPNQ9HAW4 1339 aa16■□□□□ 0.15
PDLIM5-206ENST00000437932 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDLIM5-206ENST00000437932 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
PDLIM5-206ENST00000437932 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
PDLIM5-206ENST00000437932 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
PDLIM5-206ENST00000437932 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PDLIM5-206ENST00000437932 HSPA5P11021 654 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-206ENST00000437932 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
PDLIM5-206ENST00000437932 DAXXQ9UER7 740 aaPredicted RBP15.92■□□□□ 0.14
PDLIM5-206ENST00000437932 NBR1Q14596 966 aa15.92■□□□□ 0.14
PDLIM5-206ENST00000437932 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
PDLIM5-206ENST00000437932 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
PDLIM5-206ENST00000437932 TSHZ2Q9NRE2 1034 aa15.89■□□□□ 0.14
PDLIM5-206ENST00000437932 IGF1RP08069 1367 aa15.89■□□□□ 0.13
PDLIM5-206ENST00000437932 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
PDLIM5-206ENST00000437932 CUX1P39880 1505 aa15.88■□□□□ 0.13
PDLIM5-206ENST00000437932 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
PDLIM5-206ENST00000437932 RGL3Q3MIN7 710 aa15.88■□□□□ 0.13
PDLIM5-206ENST00000437932 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
PDLIM5-206ENST00000437932 RTL5Q5HYW3 569 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-206ENST00000437932 PPP1R15AO75807 674 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-206ENST00000437932 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
PDLIM5-206ENST00000437932 B4GALNT3Q6L9W6 998 aa15.85■□□□□ 0.13
PDLIM5-206ENST00000437932 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.13
PDLIM5-206ENST00000437932 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
PDLIM5-206ENST00000437932 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
PDLIM5-206ENST00000437932 ANP32EQ9BTT0 268 aa15.82■□□□□ 0.12
PDLIM5-206ENST00000437932 BCL11AQ9H165 835 aa15.82■□□□□ 0.12
PDLIM5-206ENST00000437932 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
PDLIM5-206ENST00000437932 RBM19Q9Y4C8 960 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-206ENST00000437932 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.11
PDLIM5-206ENST00000437932 LRRC9Q6ZRR7 1453 aa15.77■□□□□ 0.11
PDLIM5-206ENST00000437932 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
PDLIM5-206ENST00000437932 TSPY4P0CV99 314 aa15.76■□□□□ 0.11
PDLIM5-206ENST00000437932 TSPY10P0CW01 314 aa15.76■□□□□ 0.11
PDLIM5-206ENST00000437932 CARD11Q9BXL7 1154 aa15.76■□□□□ 0.11
PDLIM5-206ENST00000437932 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-206ENST00000437932 NESP48681 1621 aa15.75■□□□□ 0.11
PDLIM5-206ENST00000437932 L3MBTL2Q969R5 705 aa15.74■□□□□ 0.11
PDLIM5-206ENST00000437932 RRBP1Q9P2E9 1410 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-206ENST00000437932 ERICH3Q5RHP9 1530 aa15.74■□□□□ 0.11
PDLIM5-206ENST00000437932 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
PDLIM5-206ENST00000437932 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
PDLIM5-206ENST00000437932 CCDC18Q5T9S5 1454 aa15.72■□□□□ 0.11
PDLIM5-206ENST00000437932 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-206ENST00000437932 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-206ENST00000437932 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
PDLIM5-206ENST00000437932 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
PDLIM5-206ENST00000437932 DCAF11Q8TEB1 546 aa15.69■□□□□ 0.1
PDLIM5-206ENST00000437932 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
PDLIM5-206ENST00000437932 CFTRP13569 1480 aa15.69■□□□□ 0.1
PDLIM5-206ENST00000437932 PKD2Q13563 968 aa15.68■□□□□ 0.1
PDLIM5-206ENST00000437932 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-206ENST00000437932 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
PDLIM5-206ENST00000437932 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
PDLIM5-206ENST00000437932 PPP4R2Q9NY27 417 aa15.64■□□□□ 0.09
PDLIM5-206ENST00000437932 TIAM1Q13009 1591 aa15.63■□□□□ 0.09
PDLIM5-206ENST00000437932 FGD6Q6ZV73 1430 aa15.63■□□□□ 0.09
PDLIM5-206ENST00000437932 PCF11O94913 1555 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-206ENST00000437932 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-206ENST00000437932 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.095e-6■■■□□ 18.5
PDLIM5-206ENST00000437932 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
PDLIM5-206ENST00000437932 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM5-206ENST00000437932 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM5-206ENST00000437932 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
PDLIM5-206ENST00000437932 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
PDLIM5-206ENST00000437932 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
PDLIM5-206ENST00000437932 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
PDLIM5-206ENST00000437932 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
PDLIM5-206ENST00000437932 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
PDLIM5-206ENST00000437932 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
PDLIM5-206ENST00000437932 CCDC184Q52MB2 194 aa15.55■□□□□ 0.08
PDLIM5-206ENST00000437932 LAS1LQ9Y4W2 734 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-206ENST00000437932 CASKIN1Q8WXD9 1431 aa15.54■□□□□ 0.08
PDLIM5-206ENST00000437932 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
PDLIM5-206ENST00000437932 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-206ENST00000437932 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
PDLIM5-206ENST00000437932 NUP155O75694 1391 aa15.53■□□□□ 0.08
PDLIM5-206ENST00000437932 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
PDLIM5-206ENST00000437932 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
PDLIM5-206ENST00000437932 ARXQ96QS3 562 aa15.52■□□□□ 0.07
PDLIM5-206ENST00000437932 NEUROD2Q15784 382 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms