RNA–Protein interactions for RNA: ENST00000437844.6

ZEB1-204, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,246 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-204ENST00000437844 NESP48681 1621 aa8.74□□□□□ -1.01
ZEB1-204ENST00000437844 KRI1Q8N9T8 703 aaKnown RBP8.74□□□□□ -1.01
ZEB1-204ENST00000437844 RTL5Q5HYW3 569 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-204ENST00000437844 ARID3CA6NKF2 412 aa8.7□□□□□ -1.02
ZEB1-204ENST00000437844 SOGA1O94964 1423 aa8.7□□□□□ -1.02
ZEB1-204ENST00000437844 MROH2BQ7Z745 1585 aa8.68□□□□□ -1.02
ZEB1-204ENST00000437844 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
ZEB1-204ENST00000437844 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
ZEB1-204ENST00000437844 SENP3Q9H4L4 574 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-204ENST00000437844 TOP2AP11388 1531 aaKnown RBP8.66□□□□□ -1.02
ZEB1-204ENST00000437844 FOXD1Q16676 465 aa8.66□□□□□ -1.02
ZEB1-204ENST00000437844 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-204ENST00000437844 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
ZEB1-204ENST00000437844 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
ZEB1-204ENST00000437844 CARMIL2Q6F5E8 1435 aa8.64□□□□□ -1.03
ZEB1-204ENST00000437844 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
ZEB1-204ENST00000437844 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
ZEB1-204ENST00000437844 WRNQ14191 1432 aaPredicted RBP eCLIP8.62□□□□□ -1.03
ZEB1-204ENST00000437844 SYNJ1O43426 1573 aa8.62□□□□□ -1.03
ZEB1-204ENST00000437844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.62□□□□□ -1.03
ZEB1-204ENST00000437844 CFTRP13569 1480 aa8.61□□□□□ -1.03
ZEB1-204ENST00000437844 WDR62O43379 1518 aa8.6□□□□□ -1.03
ZEB1-204ENST00000437844 FAM69CQ0P6D2 419 aa8.6□□□□□ -1.03
ZEB1-204ENST00000437844 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-204ENST00000437844 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
ZEB1-204ENST00000437844 RSF1Q96T23 1441 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-204ENST00000437844 GRIN2BQ13224 1484 aa8.59□□□□□ -1.03
ZEB1-204ENST00000437844 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
ZEB1-204ENST00000437844 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
ZEB1-204ENST00000437844 TSPY4P0CV99 314 aa8.57□□□□□ -1.04
ZEB1-204ENST00000437844 TSPY10P0CW01 314 aa8.57□□□□□ -1.04
ZEB1-204ENST00000437844 CCDC9Q9Y3X0 531 aaKnown RBP8.57□□□□□ -1.04
ZEB1-204ENST00000437844 ANP32BQ92688 251 aaKnown RBP8.56□□□□□ -1.04
ZEB1-204ENST00000437844 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
ZEB1-204ENST00000437844 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
ZEB1-204ENST00000437844 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
ZEB1-204ENST00000437844 MAGI1Q96QZ7 1491 aaPredicted RBP8.53□□□□□ -1.04
ZEB1-204ENST00000437844 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
ZEB1-204ENST00000437844 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
ZEB1-204ENST00000437844 CLSTN1O94985 981 aa8.52□□□□□ -1.05
ZEB1-204ENST00000437844 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.05
ZEB1-204ENST00000437844 FKBP8Q14318 412 aa8.52□□□□□ -1.05
ZEB1-204ENST00000437844 ISY1Q9ULR0 285 aaKnown RBP8.51□□□□□ -1.05
ZEB1-204ENST00000437844 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
ZEB1-204ENST00000437844 TOPBP1Q92547 1522 aa8.51□□□□□ -1.05
ZEB1-204ENST00000437844 KIF21AQ7Z4S6 1674 aa8.51□□□□□ -1.05
ZEB1-204ENST00000437844 THOC2Q8NI27 1593 aaKnown RBP8.51□□□□□ -1.05
ZEB1-204ENST00000437844 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
ZEB1-204ENST00000437844 UPF2Q9HAU5 1272 aaKnown RBP8.5□□□□□ -1.05
ZEB1-204ENST00000437844 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
ZEB1-204ENST00000437844 WIZO95785 1651 aa8.5□□□□□ -1.05
ZEB1-204ENST00000437844 KIF27Q86VH2 1401 aa8.5□□□□□ -1.05
ZEB1-204ENST00000437844 KCNH8Q96L42 1107 aa8.5□□□□□ -1.05
ZEB1-204ENST00000437844 JPH4Q96JJ6 628 aa8.49□□□□□ -1.05
ZEB1-204ENST00000437844 ANP32CO43423 234 aa8.49□□□□□ -1.05
ZEB1-204ENST00000437844 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
ZEB1-204ENST00000437844 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
ZEB1-204ENST00000437844 G3V3G9 751 aa8.48□□□□□ -1.05
ZEB1-204ENST00000437844 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
ZEB1-204ENST00000437844 FHAD1B1AJZ9 1412 aa8.46□□□□□ -1.06
ZEB1-204ENST00000437844 PTPRGP23470 1445 aa8.45□□□□□ -1.06
ZEB1-204ENST00000437844 ZRSR1Q15695 479 aaKnown RBP8.45□□□□□ -1.06
ZEB1-204ENST00000437844 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
ZEB1-204ENST00000437844 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-204ENST00000437844 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
ZEB1-204ENST00000437844 FGD5Q6ZNL6 1462 aa8.44□□□□□ -1.06
ZEB1-204ENST00000437844 URB2Q14146 1524 aaKnown RBP8.44□□□□□ -1.06
ZEB1-204ENST00000437844 ARHGEF11O15085 1522 aa8.43□□□□□ -1.06
ZEB1-204ENST00000437844 MEX3CQ5U5Q3 659 aaKnown RBP8.43□□□□□ -1.06
ZEB1-204ENST00000437844 MLECQ14165 292 aa8.42□□□□□ -1.06
ZEB1-204ENST00000437844 DMRT2Q9Y5R5 561 aa8.42□□□□□ -1.06
ZEB1-204ENST00000437844 POGZQ7Z3K3 1410 aa8.41□□□□□ -1.06
ZEB1-204ENST00000437844 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-204ENST00000437844 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
ZEB1-204ENST00000437844 CSB-PGBD3P0DP91 1061 aa8.4□□□□□ -1.06
ZEB1-204ENST00000437844 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.06
ZEB1-204ENST00000437844 POGKQ9P215 609 aa8.4□□□□□ -1.06
ZEB1-204ENST00000437844 GOLGA3Q08378 1498 aa8.4□□□□□ -1.06
ZEB1-204ENST00000437844 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
ZEB1-204ENST00000437844 ANP32EQ9BTT0 268 aa8.4□□□□□ -1.07
ZEB1-204ENST00000437844 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
ZEB1-204ENST00000437844 RAD54L2Q9Y4B4 1467 aa8.39□□□□□ -1.07
ZEB1-204ENST00000437844 MSH5O43196 834 aa8.39□□□□□ -1.07
ZEB1-204ENST00000437844 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
ZEB1-204ENST00000437844 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
ZEB1-204ENST00000437844 SF3B2Q13435 895 aaKnown RBP8.39□□□□□ -1.07
ZEB1-204ENST00000437844 TNIKQ9UKE5 1360 aa8.39□□□□□ -1.07
ZEB1-204ENST00000437844 POLA1P09884 1462 aaPredicted RBP8.38□□□□□ -1.07
ZEB1-204ENST00000437844 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
ZEB1-204ENST00000437844 PPM1GO15355 546 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-204ENST00000437844 CWC22Q9HCG8 908 aaKnown RBP8.36□□□□□ -1.07
ZEB1-204ENST00000437844 TRIM26Q12899 539 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-204ENST00000437844 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
ZEB1-204ENST00000437844 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
ZEB1-204ENST00000437844 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
ZEB1-204ENST00000437844 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
ZEB1-204ENST00000437844 GTF2E1P29083 439 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-204ENST00000437844 ZNF608Q9ULD9 1512 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-204ENST00000437844 PLB1Q6P1J6 1458 aa8.35□□□□□ -1.07
ZEB1-204ENST00000437844 NCLP19338 710 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms