RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 CTTNBP2Q8WZ74 1663 aa23.31■■□□□ 1.32
CD4-202ENST00000437800 FBLN2P98095 1184 aa23.29■■□□□ 1.32
CD4-202ENST00000437800 MYT1Q01538 1121 aa23.28■■□□□ 1.32
CD4-202ENST00000437800 CHMP7Q8WUX9 453 aaPredicted RBP23.27■■□□□ 1.32
CD4-202ENST00000437800 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
CD4-202ENST00000437800 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
CD4-202ENST00000437800 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
CD4-202ENST00000437800 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
CD4-202ENST00000437800 NUP160Q12769 1436 aa23.16■■□□□ 1.3
CD4-202ENST00000437800 IQGAP2Q13576 1575 aa23.15■■□□□ 1.3
CD4-202ENST00000437800 CLIP1P30622 1438 aa23.13■■□□□ 1.29
CD4-202ENST00000437800 KIAA0586Q9BVV6 1533 aa23.1■■□□□ 1.29
CD4-202ENST00000437800 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
CD4-202ENST00000437800 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.27
CD4-202ENST00000437800 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
CD4-202ENST00000437800 EFCAB5A4FU69 1503 aa23■■□□□ 1.27
CD4-202ENST00000437800 UGGT2Q9NYU1 1516 aa23■■□□□ 1.27
CD4-202ENST00000437800 ARAP1Q96P48 1450 aa23■■□□□ 1.27
CD4-202ENST00000437800 FHOD3Q2V2M9 1422 aa22.95■■□□□ 1.26
CD4-202ENST00000437800 P3H3Q8IVL6 736 aa22.94■■□□□ 1.26
CD4-202ENST00000437800 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
CD4-202ENST00000437800 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
CD4-202ENST00000437800 DISP1Q96F81 1524 aa22.93■■□□□ 1.26
CD4-202ENST00000437800 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
CD4-202ENST00000437800 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
CD4-202ENST00000437800 ZEB1P37275 1124 aaPredicted RBP22.87■■□□□ 1.25
CD4-202ENST00000437800 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
CD4-202ENST00000437800 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
CD4-202ENST00000437800 ERCC6L2Q5T890 1561 aa22.86■■□□□ 1.25
CD4-202ENST00000437800 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
CD4-202ENST00000437800 CARMIL2Q6F5E8 1435 aa22.81■■□□□ 1.24
CD4-202ENST00000437800 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
CD4-202ENST00000437800 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
CD4-202ENST00000437800 FMN1Q68DA7 1419 aa22.75■■□□□ 1.23
CD4-202ENST00000437800 FYCO1Q9BQS8 1478 aa22.69■■□□□ 1.22
CD4-202ENST00000437800 CASKIN1Q8WXD9 1431 aa22.67■■□□□ 1.22
CD4-202ENST00000437800 LRRIQ1Q96JM4 1722 aa22.67■■□□□ 1.22
CD4-202ENST00000437800 RAPGEF6Q8TEU7 1601 aa22.65■■□□□ 1.22
CD4-202ENST00000437800 PLB1Q6P1J6 1458 aa22.65■■□□□ 1.22
CD4-202ENST00000437800 PTPRGP23470 1445 aa22.63■■□□□ 1.21
CD4-202ENST00000437800 HECW1Q76N89 1606 aa22.63■■□□□ 1.21
CD4-202ENST00000437800 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
CD4-202ENST00000437800 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
CD4-202ENST00000437800 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
CD4-202ENST00000437800 ABCA8O94911 1581 aa22.61■■□□□ 1.21
CD4-202ENST00000437800 CFAP43Q8NDM7 1665 aa22.6■■□□□ 1.21
CD4-202ENST00000437800 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.2
CD4-202ENST00000437800 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
CD4-202ENST00000437800 RIMBP3CA6NJZ7 1639 aa22.56■■□□□ 1.2
CD4-202ENST00000437800 RIMBP3BA6NNM3 1639 aa22.56■■□□□ 1.2
CD4-202ENST00000437800 RIMBP3Q9UFD9 1639 aa22.56■■□□□ 1.2
CD4-202ENST00000437800 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
CD4-202ENST00000437800 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
CD4-202ENST00000437800 EPRSP07814 1512 aaKnown RBP22.53■■□□□ 1.2
CD4-202ENST00000437800 APLP2Q06481 763 aa22.52■■□□□ 1.2
CD4-202ENST00000437800 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
CD4-202ENST00000437800 ABCC2Q92887 1545 aa22.5■■□□□ 1.19
CD4-202ENST00000437800 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
CD4-202ENST00000437800 MAP3K1Q13233 1512 aa22.49■■□□□ 1.19
CD4-202ENST00000437800 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
CD4-202ENST00000437800 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
CD4-202ENST00000437800 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
CD4-202ENST00000437800 LRRC9Q6ZRR7 1453 aa22.43■■□□□ 1.18
CD4-202ENST00000437800 UHRF1BP1LA0JNW5 1464 aa22.42■■□□□ 1.18
CD4-202ENST00000437800 ATP10BO94823 1461 aa22.41■■□□□ 1.18
CD4-202ENST00000437800 ZCCHC11Q5TAX3 1644 aaKnown RBP22.39■■□□□ 1.18
CD4-202ENST00000437800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
CD4-202ENST00000437800 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
CD4-202ENST00000437800 EHBP1L1Q8N3D4 1523 aa22.37■■□□□ 1.17
CD4-202ENST00000437800 MTUS2Q5JR59 1369 aa22.35■■□□□ 1.17
CD4-202ENST00000437800 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
CD4-202ENST00000437800 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.16
CD4-202ENST00000437800 SUPT6HQ7KZ85 1726 aaKnown RBP22.3■■□□□ 1.16
CD4-202ENST00000437800 KIF14Q15058 1648 aa22.28■■□□□ 1.16
CD4-202ENST00000437800 TROQ12816 1431 aaPredicted RBP22.27■■□□□ 1.16
CD4-202ENST00000437800 NCOA2Q15596 1464 aa22.25■■□□□ 1.15
CD4-202ENST00000437800 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
CD4-202ENST00000437800 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
CD4-202ENST00000437800 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
CD4-202ENST00000437800 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
CD4-202ENST00000437800 ASXL2Q76L83 1435 aa22.17■■□□□ 1.14
CD4-202ENST00000437800 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
CD4-202ENST00000437800 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
CD4-202ENST00000437800 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
CD4-202ENST00000437800 DNAJC5Q9H3Z4 198 aa22.13■■□□□ 1.13
CD4-202ENST00000437800 ABCC10Q5T3U5 1492 aa22.13■■□□□ 1.13
CD4-202ENST00000437800 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
CD4-202ENST00000437800 CDC42BPAQ5VT25 1732 aa22.11■■□□□ 1.13
CD4-202ENST00000437800 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
CD4-202ENST00000437800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.13
CD4-202ENST00000437800 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
CD4-202ENST00000437800 ITSN2Q9NZM3 1697 aa22.09■■□□□ 1.13
CD4-202ENST00000437800 RRBP1Q9P2E9 1410 aaKnown RBP22.09■■□□□ 1.13
CD4-202ENST00000437800 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.13
CD4-202ENST00000437800 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
CD4-202ENST00000437800 GPATCH8Q9UKJ3 1502 aaKnown RBP22.05■■□□□ 1.12
CD4-202ENST00000437800 MYO5CQ9NQX4 1742 aa22.05■■□□□ 1.12
CD4-202ENST00000437800 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
CD4-202ENST00000437800 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
CD4-202ENST00000437800 PTPN23Q9H3S7 1636 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms