RNA–Protein interactions for RNA: ENST00000437437.6

NR1I3-210, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-210ENST00000437437 CTTNBP2Q8WZ74 1663 aa21.59■■□□□ 1.05
NR1I3-210ENST00000437437 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
NR1I3-210ENST00000437437 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
NR1I3-210ENST00000437437 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
NR1I3-210ENST00000437437 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
NR1I3-210ENST00000437437 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
NR1I3-210ENST00000437437 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
NR1I3-210ENST00000437437 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
NR1I3-210ENST00000437437 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
NR1I3-210ENST00000437437 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
NR1I3-210ENST00000437437 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
NR1I3-210ENST00000437437 ERCC6L2Q5T890 1561 aa21.37■■□□□ 1.01
NR1I3-210ENST00000437437 PRG4Q92954 1404 aaPredicted RBP21.37■■□□□ 1.01
NR1I3-210ENST00000437437 DISP1Q96F81 1524 aa21.36■■□□□ 1.01
NR1I3-210ENST00000437437 SAMD9Q5K651 1589 aa21.34■■□□□ 1.01
NR1I3-210ENST00000437437 KIAA0556O60303 1618 aa21.33■■□□□ 1.01
NR1I3-210ENST00000437437 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
NR1I3-210ENST00000437437 CARMIL2Q6F5E8 1435 aa21.3■■□□□ 1
NR1I3-210ENST00000437437 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
NR1I3-210ENST00000437437 ARAP1Q96P48 1450 aa21.3■■□□□ 1
NR1I3-210ENST00000437437 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
NR1I3-210ENST00000437437 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
NR1I3-210ENST00000437437 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
NR1I3-210ENST00000437437 PTPRGP23470 1445 aa21.15■□□□□ 0.98
NR1I3-210ENST00000437437 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
NR1I3-210ENST00000437437 CLIP1P30622 1438 aa21.12■□□□□ 0.97
NR1I3-210ENST00000437437 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
NR1I3-210ENST00000437437 UHRF1BP1LA0JNW5 1464 aa21.1■□□□□ 0.97
NR1I3-210ENST00000437437 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
NR1I3-210ENST00000437437 ABCA8O94911 1581 aa21.1■□□□□ 0.97
NR1I3-210ENST00000437437 ADCY10Q96PN6 1610 aa21.08■□□□□ 0.97
NR1I3-210ENST00000437437 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
NR1I3-210ENST00000437437 ABCC2Q92887 1545 aa21.07■□□□□ 0.96
NR1I3-210ENST00000437437 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
NR1I3-210ENST00000437437 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
NR1I3-210ENST00000437437 PLB1Q6P1J6 1458 aa21.02■□□□□ 0.96
NR1I3-210ENST00000437437 RAPGEF6Q8TEU7 1601 aa21.02■□□□□ 0.96
NR1I3-210ENST00000437437 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
NR1I3-210ENST00000437437 P3H3Q8IVL6 736 aa21■□□□□ 0.95
NR1I3-210ENST00000437437 KDM5BQ9UGL1 1544 aa20.99■□□□□ 0.95
NR1I3-210ENST00000437437 NUP153P49790 1475 aaKnown RBP20.94■□□□□ 0.94
NR1I3-210ENST00000437437 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
NR1I3-210ENST00000437437 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
NR1I3-210ENST00000437437 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
NR1I3-210ENST00000437437 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
NR1I3-210ENST00000437437 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
NR1I3-210ENST00000437437 ZCCHC11Q5TAX3 1644 aaKnown RBP20.92■□□□□ 0.94
NR1I3-210ENST00000437437 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
NR1I3-210ENST00000437437 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
NR1I3-210ENST00000437437 LRRIQ1Q96JM4 1722 aa20.86■□□□□ 0.93
NR1I3-210ENST00000437437 ATP10BO94823 1461 aa20.86■□□□□ 0.93
NR1I3-210ENST00000437437 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.93
NR1I3-210ENST00000437437 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
NR1I3-210ENST00000437437 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
NR1I3-210ENST00000437437 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
NR1I3-210ENST00000437437 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
NR1I3-210ENST00000437437 WDR7Q9Y4E6 1490 aa20.76■□□□□ 0.91
NR1I3-210ENST00000437437 CFAP43Q8NDM7 1665 aa20.74■□□□□ 0.91
NR1I3-210ENST00000437437 DIP2BQ9P265 1576 aa20.74■□□□□ 0.91
NR1I3-210ENST00000437437 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
NR1I3-210ENST00000437437 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
NR1I3-210ENST00000437437 GLI2P10070 1586 aa20.72■□□□□ 0.91
NR1I3-210ENST00000437437 KIF13AQ9H1H9 1805 aa20.71■□□□□ 0.91
NR1I3-210ENST00000437437 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
NR1I3-210ENST00000437437 TROQ12816 1431 aaPredicted RBP20.66■□□□□ 0.9
NR1I3-210ENST00000437437 MAGI3Q5TCQ9 1506 aa20.66■□□□□ 0.9
NR1I3-210ENST00000437437 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
NR1I3-210ENST00000437437 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.89
NR1I3-210ENST00000437437 CDK11AQ9UQ88 783 aaPredicted RBP20.63■□□□□ 0.89
NR1I3-210ENST00000437437 MAP3K4Q9Y6R4 1608 aa20.63■□□□□ 0.89
NR1I3-210ENST00000437437 PLEKHD1A6NEE1 506 aa20.62■□□□□ 0.89
NR1I3-210ENST00000437437 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
NR1I3-210ENST00000437437 EHBP1L1Q8N3D4 1523 aa20.61■□□□□ 0.89
NR1I3-210ENST00000437437 KIF14Q15058 1648 aa20.6■□□□□ 0.89
NR1I3-210ENST00000437437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
NR1I3-210ENST00000437437 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
NR1I3-210ENST00000437437 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
NR1I3-210ENST00000437437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
NR1I3-210ENST00000437437 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
NR1I3-210ENST00000437437 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
NR1I3-210ENST00000437437 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
NR1I3-210ENST00000437437 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
NR1I3-210ENST00000437437 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
NR1I3-210ENST00000437437 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
NR1I3-210ENST00000437437 SUPT6HQ7KZ85 1726 aaKnown RBP20.51■□□□□ 0.87
NR1I3-210ENST00000437437 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
NR1I3-210ENST00000437437 MYO5CQ9NQX4 1742 aa20.49■□□□□ 0.87
NR1I3-210ENST00000437437 CD109Q6YHK3 1445 aa20.48■□□□□ 0.87
NR1I3-210ENST00000437437 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
NR1I3-210ENST00000437437 PREX2Q70Z35 1606 aa20.46■□□□□ 0.87
NR1I3-210ENST00000437437 CDC42BPAQ5VT25 1732 aa20.46■□□□□ 0.87
NR1I3-210ENST00000437437 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
NR1I3-210ENST00000437437 APLP2Q06481 763 aa20.45■□□□□ 0.86
NR1I3-210ENST00000437437 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
NR1I3-210ENST00000437437 TSPOAP1O95153 1857 aa20.44■□□□□ 0.86
NR1I3-210ENST00000437437 PLCH2O75038 1416 aa20.44■□□□□ 0.86
NR1I3-210ENST00000437437 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
NR1I3-210ENST00000437437 CFAP74Q9C0B2 1584 aa20.42■□□□□ 0.86
NR1I3-210ENST00000437437 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
NR1I3-210ENST00000437437 CDC42BPBQ9Y5S2 1711 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms