RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 RIMBP3CA6NJZ7 1639 aa36.39■■■■□ 3.42
SMG1P3-202ENST00000437413 RIMBP3BA6NNM3 1639 aa36.39■■■■□ 3.42
SMG1P3-202ENST00000437413 RIMBP3Q9UFD9 1639 aa36.39■■■■□ 3.42
SMG1P3-202ENST00000437413 FAM9AQ8IZU1 332 aaPredicted RBP36.31■■■■□ 3.4
SMG1P3-202ENST00000437413 KIF21BO75037 1637 aa36.28■■■■□ 3.4
SMG1P3-202ENST00000437413 JPH4Q96JJ6 628 aa36.28■■■■□ 3.4
SMG1P3-202ENST00000437413 IQGAP2Q13576 1575 aa36.26■■■■□ 3.39
SMG1P3-202ENST00000437413 CTTNBP2Q8WZ74 1663 aa36.23■■■■□ 3.39
SMG1P3-202ENST00000437413 PRG4Q92954 1404 aaPredicted RBP36.17■■■■□ 3.38
SMG1P3-202ENST00000437413 ARAP1Q96P48 1450 aa36.13■■■■□ 3.37
SMG1P3-202ENST00000437413 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
SMG1P3-202ENST00000437413 UGGT2Q9NYU1 1516 aa36.09■■■■□ 3.37
SMG1P3-202ENST00000437413 GOLGA3Q08378 1498 aa36.06■■■■□ 3.36
SMG1P3-202ENST00000437413 CARMIL2Q6F5E8 1435 aa36.06■■■■□ 3.36
SMG1P3-202ENST00000437413 CYB5RLQ6IPT4 315 aa36■■■■□ 3.35
SMG1P3-202ENST00000437413 DISP1Q96F81 1524 aa35.93■■■■□ 3.34
SMG1P3-202ENST00000437413 KIAA0556O60303 1618 aa35.9■■■■□ 3.34
SMG1P3-202ENST00000437413 TNIKQ9UKE5 1360 aa35.89■■■■□ 3.34
SMG1P3-202ENST00000437413 UBTFP17480 764 aaKnown RBP35.87■■■■□ 3.33
SMG1P3-202ENST00000437413 PTPRGP23470 1445 aa35.81■■■■□ 3.32
SMG1P3-202ENST00000437413 SAMD9Q5K651 1589 aa35.77■■■■□ 3.32
SMG1P3-202ENST00000437413 EFCAB5A4FU69 1503 aa35.73■■■■□ 3.31
SMG1P3-202ENST00000437413 EHMT2Q96KQ7 1210 aa35.72■■■■□ 3.31
SMG1P3-202ENST00000437413 UHRF1BP1LA0JNW5 1464 aa35.6■■■■□ 3.29
SMG1P3-202ENST00000437413 UACAQ9BZF9 1416 aa35.59■■■■□ 3.29
SMG1P3-202ENST00000437413 ADCY10Q96PN6 1610 aa35.59■■■■□ 3.29
SMG1P3-202ENST00000437413 TTBK1Q5TCY1 1321 aaPredicted RBP35.56■■■■□ 3.28
SMG1P3-202ENST00000437413 ABCC2Q92887 1545 aa35.54■■■■□ 3.28
SMG1P3-202ENST00000437413 RANGAP1P46060 587 aaPredicted RBP35.54■■■■□ 3.28
SMG1P3-202ENST00000437413 P3H3Q8IVL6 736 aa35.52■■■■□ 3.28
SMG1P3-202ENST00000437413 NPM1P06748 294 aaKnown RBP eCLIP35.51■■■■□ 3.28
SMG1P3-202ENST00000437413 ABCA8O94911 1581 aa35.49■■■■□ 3.27
SMG1P3-202ENST00000437413 ARHGAP35Q9NRY4 1499 aa35.48■■■■□ 3.27
SMG1P3-202ENST00000437413 FHOD3Q2V2M9 1422 aa35.48■■■■□ 3.27
SMG1P3-202ENST00000437413 PLB1Q6P1J6 1458 aa35.45■■■■□ 3.27
SMG1P3-202ENST00000437413 KDM5BQ9UGL1 1544 aa35.4■■■■□ 3.26
SMG1P3-202ENST00000437413 MAPKBP1O60336 1514 aa35.39■■■■□ 3.26
SMG1P3-202ENST00000437413 CLIP1P30622 1438 aa35.39■■■■□ 3.26
SMG1P3-202ENST00000437413 FMN1Q68DA7 1419 aa35.38■■■■□ 3.25
SMG1P3-202ENST00000437413 RAPGEF6Q8TEU7 1601 aa35.36■■■■□ 3.25
SMG1P3-202ENST00000437413 LOC105371045A0A1W2PR82 267 aa35.34■■■■□ 3.25
SMG1P3-202ENST00000437413 ZCCHC11Q5TAX3 1644 aaKnown RBP35.29■■■■□ 3.24
SMG1P3-202ENST00000437413 CEP162Q5TB80 1403 aa35.29■■■■□ 3.24
SMG1P3-202ENST00000437413 NUP153P49790 1475 aaKnown RBP35.2■■■■□ 3.23
SMG1P3-202ENST00000437413 ASXL2Q76L83 1435 aa35.18■■■■□ 3.22
SMG1P3-202ENST00000437413 TRHP20396 242 aaPredicted RBP35.18■■■■□ 3.22
SMG1P3-202ENST00000437413 HECW1Q76N89 1606 aa35.17■■■■□ 3.22
SMG1P3-202ENST00000437413 ATP10BO94823 1461 aa35.16■■■■□ 3.22
SMG1P3-202ENST00000437413 ABCC10Q5T3U5 1492 aa35.16■■■■□ 3.22
SMG1P3-202ENST00000437413 WDR7Q9Y4E6 1490 aa35.09■■■■□ 3.21
SMG1P3-202ENST00000437413 DIP2BQ9P265 1576 aa35.09■■■■□ 3.21
SMG1P3-202ENST00000437413 CASKIN1Q8WXD9 1431 aa35.09■■■■□ 3.21
SMG1P3-202ENST00000437413 KIF13AQ9H1H9 1805 aa35.07■■■■□ 3.2
SMG1P3-202ENST00000437413 FYCO1Q9BQS8 1478 aa35.05■■■■□ 3.2
SMG1P3-202ENST00000437413 PCF11O94913 1555 aaKnown RBP35.04■■■■□ 3.2
SMG1P3-202ENST00000437413 EPRSP07814 1512 aaKnown RBP35.02■■■■□ 3.2
SMG1P3-202ENST00000437413 GLI2P10070 1586 aa35.02■■■■□ 3.2
SMG1P3-202ENST00000437413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35■■■■□ 3.19
SMG1P3-202ENST00000437413 FAM69CQ0P6D2 419 aa35■■■■□ 3.19
SMG1P3-202ENST00000437413 HNRNPUL2Q1KMD3 747 aaKnown RBP35■■■■□ 3.19
SMG1P3-202ENST00000437413 ARID3CA6NKF2 412 aa34.99■■■■□ 3.19
SMG1P3-202ENST00000437413 CCDC18Q5T9S5 1454 aa34.97■■■■□ 3.19
SMG1P3-202ENST00000437413 ATP1B4Q9UN42 357 aaPredicted RBP34.97■■■■□ 3.19
SMG1P3-202ENST00000437413 CDK13Q14004 1512 aaKnown RBP34.93■■■■□ 3.18
SMG1P3-202ENST00000437413 PLEKHD1A6NEE1 506 aa34.93■■■■□ 3.18
SMG1P3-202ENST00000437413 CDK11AQ9UQ88 783 aaPredicted RBP34.92■■■■□ 3.18
SMG1P3-202ENST00000437413 LRRIQ1Q96JM4 1722 aa34.89■■■■□ 3.18
SMG1P3-202ENST00000437413 VPS8Q8N3P4 1428 aa34.89■■■■□ 3.18
SMG1P3-202ENST00000437413 MAP3K4Q9Y6R4 1608 aa34.84■■■■□ 3.17
SMG1P3-202ENST00000437413 CFAP43Q8NDM7 1665 aa34.82■■■■□ 3.17
SMG1P3-202ENST00000437413 KCNH8Q96L42 1107 aa34.82■■■■□ 3.16
SMG1P3-202ENST00000437413 ABCA9Q8IUA7 1624 aa34.77■■■■□ 3.16
SMG1P3-202ENST00000437413 TROQ12816 1431 aaPredicted RBP34.75■■■■□ 3.15
SMG1P3-202ENST00000437413 CD109Q6YHK3 1445 aa34.72■■■■□ 3.15
SMG1P3-202ENST00000437413 TSPOAP1O95153 1857 aa34.71■■■■□ 3.15
SMG1P3-202ENST00000437413 TEX14Q8IWB6 1497 aa34.7■■■■□ 3.15
SMG1P3-202ENST00000437413 MAGI3Q5TCQ9 1506 aa34.69■■■■□ 3.14
SMG1P3-202ENST00000437413 PPRC1Q5VV67 1664 aaKnown RBP34.67■■■■□ 3.14
SMG1P3-202ENST00000437413 KIF14Q15058 1648 aa34.67■■■■□ 3.14
SMG1P3-202ENST00000437413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.65■■■■□ 3.149e-7■□□□□ 9.6
SMG1P3-202ENST00000437413 MAP3K1Q13233 1512 aa34.63■■■■□ 3.13
SMG1P3-202ENST00000437413 TIAM1Q13009 1591 aa34.59■■■■□ 3.13
SMG1P3-202ENST00000437413 MTUS2Q5JR59 1369 aa34.58■■■■□ 3.13
SMG1P3-202ENST00000437413 TTC37Q6PGP7 1564 aa34.57■■■■□ 3.13
SMG1P3-202ENST00000437413 EHBP1L1Q8N3D4 1523 aa34.56■■■■□ 3.12
SMG1P3-202ENST00000437413 PHLDB1Q86UU1 1377 aa34.53■■■■□ 3.12
SMG1P3-202ENST00000437413 ARAP3Q8WWN8 1544 aa34.51■■■■□ 3.12
SMG1P3-202ENST00000437413 MYO5CQ9NQX4 1742 aa34.5■■■■□ 3.11
SMG1P3-202ENST00000437413 APLP2Q06481 763 aa34.49■■■■□ 3.11
SMG1P3-202ENST00000437413 NEO1Q92859 1461 aa34.49■■■■□ 3.11
SMG1P3-202ENST00000437413 CFAP74Q9C0B2 1584 aa34.49■■■■□ 3.11
SMG1P3-202ENST00000437413 PLCH2O75038 1416 aa34.48■■■■□ 3.11
SMG1P3-202ENST00000437413 KDM6BO15054 1643 aa34.46■■■■□ 3.11
SMG1P3-202ENST00000437413 LRRC9Q6ZRR7 1453 aa34.44■■■■□ 3.1
SMG1P3-202ENST00000437413 FANCAO15360 1455 aa34.41■■■■□ 3.1
SMG1P3-202ENST00000437413 SUPT6HQ7KZ85 1726 aaKnown RBP34.39■■■■□ 3.1
SMG1P3-202ENST00000437413 PREX2Q70Z35 1606 aa34.37■■■■□ 3.09
SMG1P3-202ENST00000437413 CDC42BPAQ5VT25 1732 aa34.34■■■■□ 3.09
SMG1P3-202ENST00000437413 EFCAB2Q5VUJ9 269 aa34.34■■■■□ 3.09
SMG1P3-202ENST00000437413 ARHGAP5Q13017 1502 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms