RNA–Protein interactions for RNA: ENST00000436652.1

C1orf53-202, Transcript of chromosome 1 open reading frame 53, humanhuman

TSL 3

Gene C1orf53, Length 394 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-202ENST00000436652 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
C1orf53-202ENST00000436652 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
C1orf53-202ENST00000436652 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
C1orf53-202ENST00000436652 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
C1orf53-202ENST00000436652 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
C1orf53-202ENST00000436652 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
C1orf53-202ENST00000436652 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.32
C1orf53-202ENST00000436652 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
C1orf53-202ENST00000436652 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
C1orf53-202ENST00000436652 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
C1orf53-202ENST00000436652 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
C1orf53-202ENST00000436652 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
C1orf53-202ENST00000436652 RBM42Q9BTD8 480 aaKnown RBP16.99■□□□□ 0.31
C1orf53-202ENST00000436652 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
C1orf53-202ENST00000436652 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
C1orf53-202ENST00000436652 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
C1orf53-202ENST00000436652 KIF13AQ9H1H9 1805 aa16.9■□□□□ 0.3
C1orf53-202ENST00000436652 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
C1orf53-202ENST00000436652 SOGA1O94964 1423 aa16.89■□□□□ 0.29
C1orf53-202ENST00000436652 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
C1orf53-202ENST00000436652 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
C1orf53-202ENST00000436652 FAM69CQ0P6D2 419 aa16.82■□□□□ 0.28
C1orf53-202ENST00000436652 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
C1orf53-202ENST00000436652 POLA2Q14181 598 aa16.8■□□□□ 0.28
C1orf53-202ENST00000436652 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
C1orf53-202ENST00000436652 HECW2Q9P2P5 1572 aa16.75■□□□□ 0.27
C1orf53-202ENST00000436652 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
C1orf53-202ENST00000436652 KDM6BO15054 1643 aa16.72■□□□□ 0.27
C1orf53-202ENST00000436652 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
C1orf53-202ENST00000436652 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
C1orf53-202ENST00000436652 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
C1orf53-202ENST00000436652 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
C1orf53-202ENST00000436652 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
C1orf53-202ENST00000436652 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
C1orf53-202ENST00000436652 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
C1orf53-202ENST00000436652 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
C1orf53-202ENST00000436652 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
C1orf53-202ENST00000436652 CUX1P39880 1505 aa16.61■□□□□ 0.25
C1orf53-202ENST00000436652 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
C1orf53-202ENST00000436652 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
C1orf53-202ENST00000436652 NUP160Q12769 1436 aa16.6■□□□□ 0.25
C1orf53-202ENST00000436652 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
C1orf53-202ENST00000436652 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
C1orf53-202ENST00000436652 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
C1orf53-202ENST00000436652 PRG4Q92954 1404 aaPredicted RBP16.55■□□□□ 0.24
C1orf53-202ENST00000436652 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
C1orf53-202ENST00000436652 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
C1orf53-202ENST00000436652 ILDR2Q71H61 639 aa16.52■□□□□ 0.24
C1orf53-202ENST00000436652 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
C1orf53-202ENST00000436652 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
C1orf53-202ENST00000436652 ADCY10Q96PN6 1610 aa16.48■□□□□ 0.23
C1orf53-202ENST00000436652 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
C1orf53-202ENST00000436652 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
C1orf53-202ENST00000436652 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
C1orf53-202ENST00000436652 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
C1orf53-202ENST00000436652 SOCS7O14512 581 aa16.44■□□□□ 0.22
C1orf53-202ENST00000436652 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
C1orf53-202ENST00000436652 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
C1orf53-202ENST00000436652 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
C1orf53-202ENST00000436652 DISP3Q9P2K9 1392 aa16.33■□□□□ 0.2
C1orf53-202ENST00000436652 TTBK1Q5TCY1 1321 aaPredicted RBP16.27■□□□□ 0.2
C1orf53-202ENST00000436652 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
C1orf53-202ENST00000436652 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
C1orf53-202ENST00000436652 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
C1orf53-202ENST00000436652 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
C1orf53-202ENST00000436652 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
C1orf53-202ENST00000436652 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
C1orf53-202ENST00000436652 GLI2P10070 1586 aa16.21■□□□□ 0.18
C1orf53-202ENST00000436652 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
C1orf53-202ENST00000436652 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
C1orf53-202ENST00000436652 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
C1orf53-202ENST00000436652 PTPRGP23470 1445 aa16.14■□□□□ 0.17
C1orf53-202ENST00000436652 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
C1orf53-202ENST00000436652 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
C1orf53-202ENST00000436652 ZBTB22O15209 634 aa16.12■□□□□ 0.17
C1orf53-202ENST00000436652 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
C1orf53-202ENST00000436652 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
C1orf53-202ENST00000436652 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
C1orf53-202ENST00000436652 PTPRMP28827 1452 aa16.1■□□□□ 0.17
C1orf53-202ENST00000436652 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
C1orf53-202ENST00000436652 KIF21BO75037 1637 aa16.09■□□□□ 0.17
C1orf53-202ENST00000436652 CUL7Q14999 1698 aa16.08■□□□□ 0.16
C1orf53-202ENST00000436652 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
C1orf53-202ENST00000436652 HSPA2P54652 639 aa16.06■□□□□ 0.16
C1orf53-202ENST00000436652 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
C1orf53-202ENST00000436652 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
C1orf53-202ENST00000436652 SPATA31D1Q6ZQQ2 1576 aa16.04■□□□□ 0.16
C1orf53-202ENST00000436652 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
C1orf53-202ENST00000436652 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
C1orf53-202ENST00000436652 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
C1orf53-202ENST00000436652 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
C1orf53-202ENST00000436652 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
C1orf53-202ENST00000436652 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
C1orf53-202ENST00000436652 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
C1orf53-202ENST00000436652 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
C1orf53-202ENST00000436652 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
C1orf53-202ENST00000436652 KDM5BQ9UGL1 1544 aa15.94■□□□□ 0.14
C1orf53-202ENST00000436652 HAX1O00165 279 aa15.94■□□□□ 0.14
C1orf53-202ENST00000436652 ZCCHC11Q5TAX3 1644 aaKnown RBP15.92■□□□□ 0.14
C1orf53-202ENST00000436652 CD109Q6YHK3 1445 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms