RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 FYCO1Q9BQS8 1478 aa23.23■■□□□ 1.31
RBFOX1-205ENST00000436368 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
RBFOX1-205ENST00000436368 URB2Q14146 1524 aaKnown RBP23.22■■□□□ 1.31
RBFOX1-205ENST00000436368 LRRC9Q6ZRR7 1453 aa23.2■■□□□ 1.3
RBFOX1-205ENST00000436368 CTTNBP2Q8WZ74 1663 aa23.2■■□□□ 1.3
RBFOX1-205ENST00000436368 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
RBFOX1-205ENST00000436368 FMN1Q68DA7 1419 aa23.17■■□□□ 1.3
RBFOX1-205ENST00000436368 CASKIN1Q8WXD9 1431 aa23.15■■□□□ 1.3
RBFOX1-205ENST00000436368 DHX57Q6P158 1386 aaKnown RBP23.15■■□□□ 1.3
RBFOX1-205ENST00000436368 PCF11O94913 1555 aaKnown RBP23.15■■□□□ 1.3
RBFOX1-205ENST00000436368 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
RBFOX1-205ENST00000436368 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
RBFOX1-205ENST00000436368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
RBFOX1-205ENST00000436368 FHOD3Q2V2M9 1422 aa23.06■■□□□ 1.28
RBFOX1-205ENST00000436368 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
RBFOX1-205ENST00000436368 SAMD9Q5K651 1589 aa23.03■■□□□ 1.28
RBFOX1-205ENST00000436368 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
RBFOX1-205ENST00000436368 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
RBFOX1-205ENST00000436368 MRC2Q9UBG0 1479 aa22.97■■□□□ 1.27
RBFOX1-205ENST00000436368 SETD5Q9C0A6 1442 aa22.97■■□□□ 1.27
RBFOX1-205ENST00000436368 TARBP1Q13395 1621 aaKnown RBP22.97■■□□□ 1.27
RBFOX1-205ENST00000436368 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
RBFOX1-205ENST00000436368 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
RBFOX1-205ENST00000436368 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
RBFOX1-205ENST00000436368 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
RBFOX1-205ENST00000436368 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
RBFOX1-205ENST00000436368 ATP1B4Q9UN42 357 aaPredicted RBP22.91■■□□□ 1.26
RBFOX1-205ENST00000436368 CCDC18Q5T9S5 1454 aa22.89■■□□□ 1.25
RBFOX1-205ENST00000436368 MTUS2Q5JR59 1369 aa22.88■■□□□ 1.25
RBFOX1-205ENST00000436368 ITGAEP38570 1179 aa22.87■■□□□ 1.25
RBFOX1-205ENST00000436368 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
RBFOX1-205ENST00000436368 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
RBFOX1-205ENST00000436368 EHBP1L1Q8N3D4 1523 aa22.87■■□□□ 1.25
RBFOX1-205ENST00000436368 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
RBFOX1-205ENST00000436368 ADAMTS12P58397 1594 aa22.85■■□□□ 1.25
RBFOX1-205ENST00000436368 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
RBFOX1-205ENST00000436368 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
RBFOX1-205ENST00000436368 SCAF1Q9H7N4 1312 aaKnown RBP22.82■■□□□ 1.24
RBFOX1-205ENST00000436368 TIMELESSQ9UNS1 1208 aa22.82■■□□□ 1.24
RBFOX1-205ENST00000436368 IQGAP2Q13576 1575 aa22.82■■□□□ 1.24
RBFOX1-205ENST00000436368 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
RBFOX1-205ENST00000436368 SUPT6HQ7KZ85 1726 aaKnown RBP22.78■■□□□ 1.24
RBFOX1-205ENST00000436368 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
RBFOX1-205ENST00000436368 WDR62O43379 1518 aa22.78■■□□□ 1.24
RBFOX1-205ENST00000436368 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
RBFOX1-205ENST00000436368 MYOM3Q5VTT5 1437 aa22.76■■□□□ 1.23
RBFOX1-205ENST00000436368 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
RBFOX1-205ENST00000436368 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
RBFOX1-205ENST00000436368 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
RBFOX1-205ENST00000436368 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
RBFOX1-205ENST00000436368 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
RBFOX1-205ENST00000436368 MIER1Q8N108 512 aa22.67■■□□□ 1.22
RBFOX1-205ENST00000436368 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
RBFOX1-205ENST00000436368 KIAA0586Q9BVV6 1533 aa22.63■■□□□ 1.21
RBFOX1-205ENST00000436368 TCOF1Q13428 1488 aaKnown RBP22.62■■□□□ 1.21
RBFOX1-205ENST00000436368 LRRIQ1Q96JM4 1722 aa22.61■■□□□ 1.21
RBFOX1-205ENST00000436368 AKNAQ7Z591 1439 aa22.61■■□□□ 1.21
RBFOX1-205ENST00000436368 MIA2Q96PC5 1412 aa22.61■■□□□ 1.21
RBFOX1-205ENST00000436368 UACAQ9BZF9 1416 aa22.61■■□□□ 1.21
RBFOX1-205ENST00000436368 EPRSP07814 1512 aaKnown RBP22.61■■□□□ 1.21
RBFOX1-205ENST00000436368 PTPN23Q9H3S7 1636 aa22.61■■□□□ 1.21
RBFOX1-205ENST00000436368 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
RBFOX1-205ENST00000436368 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
RBFOX1-205ENST00000436368 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
RBFOX1-205ENST00000436368 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
RBFOX1-205ENST00000436368 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
RBFOX1-205ENST00000436368 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
RBFOX1-205ENST00000436368 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
RBFOX1-205ENST00000436368 NAIPQ13075 1403 aa22.52■■□□□ 1.2
RBFOX1-205ENST00000436368 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
RBFOX1-205ENST00000436368 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
RBFOX1-205ENST00000436368 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-205ENST00000436368 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
RBFOX1-205ENST00000436368 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
RBFOX1-205ENST00000436368 SYNJ2O15056 1496 aa22.46■■□□□ 1.19
RBFOX1-205ENST00000436368 PTPRKQ15262 1439 aa22.46■■□□□ 1.19
RBFOX1-205ENST00000436368 DISP1Q96F81 1524 aa22.45■■□□□ 1.18
RBFOX1-205ENST00000436368 RAPGEF6Q8TEU7 1601 aa22.44■■□□□ 1.18
RBFOX1-205ENST00000436368 CDK13Q14004 1512 aaKnown RBP22.43■■□□□ 1.18
RBFOX1-205ENST00000436368 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
RBFOX1-205ENST00000436368 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
RBFOX1-205ENST00000436368 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
RBFOX1-205ENST00000436368 ROCK1Q13464 1354 aa22.4■■□□□ 1.18
RBFOX1-205ENST00000436368 NUP153P49790 1475 aaKnown RBP22.37■■□□□ 1.17
RBFOX1-205ENST00000436368 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
RBFOX1-205ENST00000436368 NUP160Q12769 1436 aa22.33■■□□□ 1.17
RBFOX1-205ENST00000436368 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-205ENST00000436368 ITSN2Q9NZM3 1697 aa22.31■■□□□ 1.16
RBFOX1-205ENST00000436368 DNMT1P26358 1616 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-205ENST00000436368 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
RBFOX1-205ENST00000436368 DAPK1P53355 1430 aa22.3■■□□□ 1.16
RBFOX1-205ENST00000436368 ADCY10Q96PN6 1610 aa22.26■■□□□ 1.15
RBFOX1-205ENST00000436368 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
RBFOX1-205ENST00000436368 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
RBFOX1-205ENST00000436368 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
RBFOX1-205ENST00000436368 ABCC5O15440 1437 aa22.2■■□□□ 1.14
RBFOX1-205ENST00000436368 CCER2I3L3R5 266 aa22.18■■□□□ 1.14
RBFOX1-205ENST00000436368 CAMSAP2Q08AD1 1489 aa22.17■■□□□ 1.14
RBFOX1-205ENST00000436368 ANP32CO43423 234 aa22.16■■□□□ 1.14
RBFOX1-205ENST00000436368 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms